BLASTX nr result

ID: Coptis23_contig00007838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007838
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276733.1| PREDICTED: uncharacterized protein LOC100266...   237   2e-60
dbj|BAE48661.1| Pm27 [Prunus mume]                                    223   4e-56
ref|XP_002528624.1| conserved hypothetical protein [Ricinus comm...   219   6e-55
ref|XP_002304076.1| predicted protein [Populus trichocarpa] gi|2...   213   4e-53
ref|XP_002284359.1| PREDICTED: uncharacterized protein LOC100259...   211   2e-52

>ref|XP_002276733.1| PREDICTED: uncharacterized protein LOC100266910 [Vitis vinifera]
          Length = 363

 Score =  237 bits (605), Expect = 2e-60
 Identities = 129/218 (59%), Positives = 145/218 (66%), Gaps = 8/218 (3%)
 Frame = +3

Query: 3   YRYSNCLDQYEKAYKKEAPAYQGQPWHGSADYSVAG--SDWPAKKCEGLELACPLCRGQV 176
           +RYSNCLDQY+KAY K      GQ   GS D  +    S+WP +KCE  ELACPLCRGQV
Sbjct: 84  FRYSNCLDQYKKAYTKVTSTNPGQSLDGSVDNPIMNPVSNWPVEKCEVTELACPLCRGQV 143

Query: 177 KGWTVVEAARKYLNAKKRTCMQDKCSFAGTYKQLRKHVKQEHPSARPRELDPILEQKWET 356
           KGWTVVE AR+YLNAKKR+CMQD CSF G YK+LRKHV+ EHPSA+PRE+DPILEQKW  
Sbjct: 144 KGWTVVEPAREYLNAKKRSCMQDNCSFVGNYKELRKHVRAEHPSAQPREVDPILEQKWRR 203

Query: 357 LEDERARDDAISTIRSSMPGAMVLGDYVIERNHHXXXXXXXXXXXXXXXXXMD--NVG-- 524
           LE ER RDD ISTIRSSMPGAMV GDYVIE NH+                  +   VG  
Sbjct: 204 LERERERDDVISTIRSSMPGAMVFGDYVIEGNHYDFDSDEGEHFDADAVERNEGFEVGFD 263

Query: 525 HNFMNV-LLFEAFGARRTNRMNACLRR-ERGYHQPSDE 632
            N +NV LL  AFG      +N  LRR ERG  +  DE
Sbjct: 264 SNLVNVFLLLHAFGPAGNIGLNRRLRRSERGLGRALDE 301


>dbj|BAE48661.1| Pm27 [Prunus mume]
          Length = 362

 Score =  223 bits (568), Expect = 4e-56
 Identities = 116/217 (53%), Positives = 142/217 (65%), Gaps = 8/217 (3%)
 Frame = +3

Query: 3   YRYSNCLDQYEKAYKKEAPAYQGQPWHGSADYSVA--GSDWPAKKCEGLELACPLCRGQV 176
           +R+SNCL QY+KAY K   +  GQP  GS +  +    S+WPA+KCE  ELACPLCRG+V
Sbjct: 83  FRHSNCLGQYKKAYTKMVSSDHGQPLLGSDNNPIVLPDSEWPAQKCEVSELACPLCRGKV 142

Query: 177 KGWTVVEAARKYLNAKKRTCMQDKCSFAGTYKQLRKHVKQEHPSARPRELDPILEQKWET 356
           KGWTV+E AR YLNAKKR+CMQ+ CSF G YK+L++HV+ EHPSARPRE+DP+LEQKW  
Sbjct: 143 KGWTVLEPARDYLNAKKRSCMQENCSFVGNYKELKRHVRAEHPSARPREVDPVLEQKWRR 202

Query: 357 LEDERARDDAISTIRSSMPGAMVLGDYVIERNHHXXXXXXXXXXXXXXXXXMD-----NV 521
           LE ER  DD ISTI+SSMPGAMV GDYVIE N++                  +       
Sbjct: 203 LEHERETDDVISTIQSSMPGAMVFGDYVIEGNNYGFDTDEEDGGFDAEAGERNGGFGLGF 262

Query: 522 GHNFMNV-LLFEAFGARRTNRMNACLRRERGYHQPSD 629
             N +NV  L  AFG+  T R+    + ER  H PSD
Sbjct: 263 DGNLVNVFFLLHAFGSSGTGRLR---QPERALHHPSD 296


>ref|XP_002528624.1| conserved hypothetical protein [Ricinus communis]
           gi|223531969|gb|EEF33782.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 358

 Score =  219 bits (558), Expect = 6e-55
 Identities = 119/218 (54%), Positives = 142/218 (65%), Gaps = 8/218 (3%)
 Frame = +3

Query: 3   YRYSNCLDQYEKAYKKEAPAYQGQPWHGSADYSVAGSD--WPAKKCEGLELACPLCRGQV 176
           +RYSNCLDQY+KAY K   +      +G+AD S+  SD  WP  KCE  ELACPLCRGQV
Sbjct: 84  FRYSNCLDQYKKAYTKVTSS------NGTADNSILLSDSGWPVDKCEVTELACPLCRGQV 137

Query: 177 KGWTVVEAARKYLNAKKRTCMQDKCSFAGTYKQLRKHVKQEHPSARPRELDPILEQKWET 356
           KGWTVVE AR YLNAK+R+CMQD CSF GT+K+LRKH++  HPSARPRE+DP+LEQKW  
Sbjct: 138 KGWTVVEPARDYLNAKRRSCMQDDCSFVGTFKELRKHMRTAHPSARPREVDPMLEQKWRR 197

Query: 357 LEDERARDDAISTIRSSMPGAMVLGDYVIERNHHXXXXXXXXXXXXXXXXXMD---NVG- 524
           LE ER  DD ISTIRS+MPGAMV GDYVIE N+H                  +   +VG 
Sbjct: 198 LEREREHDDVISTIRSTMPGAMVFGDYVIEGNNHGFDSDEENGGFDADAAERNGGLDVGF 257

Query: 525 -HNFMNV-LLFEAFGARRTNRMNACLRRERGYHQPSDE 632
             N +NV LL  AFG           + ER  ++ S+E
Sbjct: 258 DRNLVNVFLLLHAFGPSGDGLSRRLRQPERSSYRASNE 295


>ref|XP_002304076.1| predicted protein [Populus trichocarpa] gi|222841508|gb|EEE79055.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  213 bits (542), Expect = 4e-53
 Identities = 119/217 (54%), Positives = 137/217 (63%), Gaps = 7/217 (3%)
 Frame = +3

Query: 3   YRYSNCLDQYEKAYKKEAPAYQGQPWHGSADYSVAGSD--WPAKKCEGLELACPLCRGQV 176
           +RYSNCLDQY+ AY K   +       G+A+  +  SD   P +KCE  ELACPLCRGQV
Sbjct: 84  FRYSNCLDQYKNAYTKIISST------GTAENPILVSDSSQPVEKCEATELACPLCRGQV 137

Query: 177 KGWTVVEAARKYLNAKKRTCMQDKCSFAGTYKQLRKHVKQEHPSARPRELDPILEQKWET 356
           KGWTVVE AR+YLNAKKR+CMQD CSF GTYK+LRKHVK  HPSARPR +DPILEQKW  
Sbjct: 138 KGWTVVEPAREYLNAKKRSCMQDDCSFIGTYKELRKHVKTNHPSARPRAVDPILEQKWRR 197

Query: 357 LEDERARDDAISTIRSSMPGAMVLGDYVIERNHHXXXXXXXXXXXXXXXXXMD--NVG-- 524
           LE ER  DD ISTIRS+MPGAMV GDYVIE +H+                  +   VG  
Sbjct: 198 LEREREHDDVISTIRSTMPGAMVFGDYVIEGSHYGFDTDEDGGFDADATERNEGFEVGFD 257

Query: 525 HNFMNV-LLFEAFGARRTNRMNACLRRERGYHQPSDE 632
            N +NV LL  AFG    +        ER   Q +DE
Sbjct: 258 RNLVNVFLLLHAFGPTGDDHSRRLRHPERTDRQMTDE 294


>ref|XP_002284359.1| PREDICTED: uncharacterized protein LOC100259117 [Vitis vinifera]
          Length = 323

 Score =  211 bits (537), Expect = 2e-52
 Identities = 103/153 (67%), Positives = 116/153 (75%), Gaps = 2/153 (1%)
 Frame = +3

Query: 6   RYSNCLDQYEKAYKKEAPAYQGQPWHGSADYSVAGSD--WPAKKCEGLELACPLCRGQVK 179
           RYSNCLDQY+KAY K           GS +    GS    P +K E  EL CPLCRGQVK
Sbjct: 86  RYSNCLDQYKKAYTKVTSTESSPQSQGSTENLSLGSHSGLPNEKMEVSELLCPLCRGQVK 145

Query: 180 GWTVVEAARKYLNAKKRTCMQDKCSFAGTYKQLRKHVKQEHPSARPRELDPILEQKWETL 359
           GWTVVE ARKYLNAKKRTCMQD CS+ GTYKQLRKHV+ EHP ARPRE+DP LE+KW+ L
Sbjct: 146 GWTVVEPARKYLNAKKRTCMQDNCSYVGTYKQLRKHVRAEHPLARPREVDPSLEEKWKRL 205

Query: 360 EDERARDDAISTIRSSMPGAMVLGDYVIERNHH 458
           E ER R+D +STIRSSMPGA++LGDYVIE N+H
Sbjct: 206 EGERERNDVLSTIRSSMPGALILGDYVIEGNYH 238


Top