BLASTX nr result

ID: Coptis23_contig00006116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006116
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550809.1| PREDICTED: probable glycosyltransferase At5g...   124   2e-50
ref|XP_003550811.1| PREDICTED: xylogalacturonan beta-1,3-xylosyl...   123   2e-50
ref|XP_003542647.1| PREDICTED: xylogalacturonan beta-1,3-xylosyl...   114   6e-50
ref|XP_002324623.1| predicted protein [Populus trichocarpa] gi|2...   115   6e-50
ref|XP_002531944.1| catalytic, putative [Ricinus communis] gi|22...   113   7e-50

>ref|XP_003550809.1| PREDICTED: probable glycosyltransferase At5g20260-like [Glycine
           max]
          Length = 398

 Score =  124 bits (310), Expect(2) = 2e-50
 Identities = 57/69 (82%), Positives = 62/69 (89%)
 Frame = +3

Query: 3   LLKQWKDKDNEVQVHEYLPKGQNYHQLMGQSKYCLCPSGWEVASPRVVEAIQAGCVPVLI 182
           LLK WKDKDN VQVHEYLPKGQNY +LMG SK+CLCPSG+EVASPRVVEAI AGCVPV+I
Sbjct: 252 LLKHWKDKDNHVQVHEYLPKGQNYTELMGLSKFCLCPSGYEVASPRVVEAINAGCVPVII 311

Query: 183 SEDYVPPFS 209
           SE+Y  PFS
Sbjct: 312 SENYSLPFS 320



 Score =  100 bits (250), Expect(2) = 2e-50
 Identities = 46/73 (63%), Positives = 58/73 (79%)
 Frame = +2

Query: 269 VLDWSQFSVQIPVKRIPDIKTILQEIPDHTFLKMQKRLRRVQIHFEVNRPAKRFDVMHML 448
           VL+WSQFS+QI V+ I DIKTILQ +    + K+ + +RRVQ HF +NRPAK FD+MHM+
Sbjct: 322 VLNWSQFSIQISVENISDIKTILQNVTQKKYKKLHRNVRRVQRHFVMNRPAKPFDLMHMI 381

Query: 449 LHSIWLRRLNLRL 487
           LHSIWLRRLN R+
Sbjct: 382 LHSIWLRRLNFRV 394


>ref|XP_003550811.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like
           [Glycine max]
          Length = 411

 Score =  123 bits (308), Expect(2) = 2e-50
 Identities = 55/69 (79%), Positives = 61/69 (88%)
 Frame = +3

Query: 3   LLKQWKDKDNEVQVHEYLPKGQNYHQLMGQSKYCLCPSGWEVASPRVVEAIQAGCVPVLI 182
           LL  WK KDN++QVHEYLPKG+NY QLMGQSK+CLCPSG+EVASPRVVEAI AGCVPVLI
Sbjct: 263 LLNHWKGKDNDIQVHEYLPKGKNYTQLMGQSKFCLCPSGYEVASPRVVEAIHAGCVPVLI 322

Query: 183 SEDYVPPFS 209
           S  Y PPF+
Sbjct: 323 SSSYSPPFT 331



 Score =  101 bits (251), Expect(2) = 2e-50
 Identities = 47/73 (64%), Positives = 61/73 (83%)
 Frame = +2

Query: 269 VLDWSQFSVQIPVKRIPDIKTILQEIPDHTFLKMQKRLRRVQIHFEVNRPAKRFDVMHML 448
           VL+WSQFSV+IPV++I +IKTILQ I  + +L++   + RV+ HF +NRPAK FD+MHM+
Sbjct: 333 VLNWSQFSVEIPVEKISEIKTILQSISRNRYLRLHMNVLRVRRHFMLNRPAKPFDLMHMI 392

Query: 449 LHSIWLRRLNLRL 487
           LHSIWLRRLNLRL
Sbjct: 393 LHSIWLRRLNLRL 405


>ref|XP_003542647.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like
           [Glycine max]
          Length = 340

 Score =  114 bits (286), Expect(2) = 6e-50
 Identities = 52/69 (75%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   LLKQWKDKDNEVQVHEYLPKGQNYHQLMGQSKYCLCPSGWEVASPRVVEAIQAGCVPVLI 182
           LL  WKDKDN+VQ++E LPKG+ Y +LMGQSK+CLCPSG+EVASPRVVEAI AGCVPVLI
Sbjct: 194 LLNHWKDKDNDVQIYESLPKGKVYTKLMGQSKFCLCPSGYEVASPRVVEAIYAGCVPVLI 253

Query: 183 SEDYVPPFS 209
           S  Y PPF+
Sbjct: 254 SSSYSPPFT 262



 Score =  108 bits (269), Expect(2) = 6e-50
 Identities = 49/73 (67%), Positives = 62/73 (84%)
 Frame = +2

Query: 269 VLDWSQFSVQIPVKRIPDIKTILQEIPDHTFLKMQKRLRRVQIHFEVNRPAKRFDVMHML 448
           VL+WSQFSV+IPV++IP+IKTILQ +    +LK+Q  + RVQ HF +NRPAK FD+MHM+
Sbjct: 264 VLNWSQFSVEIPVEKIPEIKTILQSVSPKKYLKLQMNVLRVQRHFTINRPAKPFDLMHMI 323

Query: 449 LHSIWLRRLNLRL 487
           LHSIWLRRLNL+L
Sbjct: 324 LHSIWLRRLNLKL 336


>ref|XP_002324623.1| predicted protein [Populus trichocarpa] gi|222866057|gb|EEF03188.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  115 bits (288), Expect(2) = 6e-50
 Identities = 53/69 (76%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   LLKQWKDKDNEVQVHEYLPKGQNYHQLMGQSKYCLCPSGWEVASPRVVEAIQAGCVPVLI 182
           L K WK+KDNEVQVHE LPKG+NY +LMGQSK+CLCPSG+EVASPRVVEAI  GCVPV+I
Sbjct: 193 LFKHWKNKDNEVQVHELLPKGKNYTRLMGQSKFCLCPSGFEVASPRVVEAIYQGCVPVII 252

Query: 183 SEDYVPPFS 209
           S +Y  PFS
Sbjct: 253 SNNYSLPFS 261



 Score =  107 bits (267), Expect(2) = 6e-50
 Identities = 49/73 (67%), Positives = 63/73 (86%)
 Frame = +2

Query: 269 VLDWSQFSVQIPVKRIPDIKTILQEIPDHTFLKMQKRLRRVQIHFEVNRPAKRFDVMHML 448
           VL+WSQFSVQIPV++IP+IK ILQ I +  +L+M +R++RVQ HF +NRPAK FDV+HM+
Sbjct: 263 VLNWSQFSVQIPVEKIPEIKMILQRISNSKYLRMHERVKRVQRHFVLNRPAKPFDVIHMV 322

Query: 449 LHSIWLRRLNLRL 487
           LHS+WLRRLN RL
Sbjct: 323 LHSLWLRRLNFRL 335


>ref|XP_002531944.1| catalytic, putative [Ricinus communis] gi|223528390|gb|EEF30426.1|
           catalytic, putative [Ricinus communis]
          Length = 363

 Score =  113 bits (282), Expect(2) = 7e-50
 Identities = 50/73 (68%), Positives = 66/73 (90%)
 Frame = +2

Query: 269 VLDWSQFSVQIPVKRIPDIKTILQEIPDHTFLKMQKRLRRVQIHFEVNRPAKRFDVMHML 448
           VLDWSQ SVQIPV++IP+IKTIL+ + +  +L+MQKR+RRVQ HFE+NRP+K FDV+HM+
Sbjct: 291 VLDWSQISVQIPVEKIPEIKTILKGVSNDKYLRMQKRVRRVQRHFEINRPSKPFDVLHMV 350

Query: 449 LHSIWLRRLNLRL 487
           LHS+WLRRL++RL
Sbjct: 351 LHSVWLRRLDIRL 363



 Score =  109 bits (272), Expect(2) = 7e-50
 Identities = 48/69 (69%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   LLKQWKDKDNEVQVHEYLPKGQNYHQLMGQSKYCLCPSGWEVASPRVVEAIQAGCVPVLI 182
           LL  WK+KD+EVQVHEYL K ++Y +LMGQSK+CLCPSG+EVASPR+VE+I AGC+PV+I
Sbjct: 221 LLHHWKNKDDEVQVHEYLSKDEDYRKLMGQSKFCLCPSGYEVASPRIVESIYAGCIPVII 280

Query: 183 SEDYVPPFS 209
           S+ Y  PFS
Sbjct: 281 SDHYNLPFS 289


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