BLASTX nr result

ID: Coptis23_contig00004092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004092
         (1965 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19496.3| unnamed protein product [Vitis vinifera]              194   6e-47
ref|XP_002282892.1| PREDICTED: uncharacterized protein LOC100267...   194   6e-47
emb|CAN83345.1| hypothetical protein VITISV_042276 [Vitis vinifera]   192   3e-46
ref|XP_002301172.1| predicted protein [Populus trichocarpa] gi|2...   191   6e-46
ref|XP_003589164.1| Zinc finger protein [Medicago truncatula] gi...   189   2e-45

>emb|CBI19496.3| unnamed protein product [Vitis vinifera]
          Length = 172

 Score =  194 bits (494), Expect = 6e-47
 Identities = 94/141 (66%), Positives = 108/141 (76%)
 Frame = +2

Query: 1409 QIRNALDAMRRGGEGVRFEDVFILDQSMFYGMSXXXXXXXXXXXXXXNMSYEELLALEDR 1588
            +IRN LD MRRG E +RFEDV ILDQS+F+G++              NMSYEELLALE+R
Sbjct: 31   EIRNVLDLMRRG-EDLRFEDVMILDQSVFFGVADIHDRHRDMRLDVDNMSYEELLALEER 89

Query: 1589 IGNVSTGLSEETITKCLKQKKYLSFTIGVPSEVEPCCVCQEEYVDGDDLGRLDCGHDFHS 1768
            IG+V TGLSEETI K LKQ+KY S   G   EVEPCC+CQEEY DG+D+G L+CGHDFH 
Sbjct: 90   IGDVCTGLSEETILKQLKQRKYWSVARGAEVEVEPCCICQEEYGDGEDIGTLECGHDFHY 149

Query: 1769 GCIKEWLTHKNLCPICKTTAL 1831
            GCIK+WL HKNLCPICKTTAL
Sbjct: 150  GCIKQWLMHKNLCPICKTTAL 170


>ref|XP_002282892.1| PREDICTED: uncharacterized protein LOC100267740 [Vitis vinifera]
          Length = 734

 Score =  194 bits (494), Expect = 6e-47
 Identities = 94/141 (66%), Positives = 108/141 (76%)
 Frame = +2

Query: 1409 QIRNALDAMRRGGEGVRFEDVFILDQSMFYGMSXXXXXXXXXXXXXXNMSYEELLALEDR 1588
            +IRN LD MRRG E +RFEDV ILDQS+F+G++              NMSYEELLALE+R
Sbjct: 593  EIRNVLDLMRRG-EDLRFEDVMILDQSVFFGVADIHDRHRDMRLDVDNMSYEELLALEER 651

Query: 1589 IGNVSTGLSEETITKCLKQKKYLSFTIGVPSEVEPCCVCQEEYVDGDDLGRLDCGHDFHS 1768
            IG+V TGLSEETI K LKQ+KY S   G   EVEPCC+CQEEY DG+D+G L+CGHDFH 
Sbjct: 652  IGDVCTGLSEETILKQLKQRKYWSVARGAEVEVEPCCICQEEYGDGEDIGTLECGHDFHY 711

Query: 1769 GCIKEWLTHKNLCPICKTTAL 1831
            GCIK+WL HKNLCPICKTTAL
Sbjct: 712  GCIKQWLMHKNLCPICKTTAL 732


>emb|CAN83345.1| hypothetical protein VITISV_042276 [Vitis vinifera]
          Length = 1022

 Score =  192 bits (488), Expect = 3e-46
 Identities = 93/141 (65%), Positives = 107/141 (75%)
 Frame = +2

Query: 1409 QIRNALDAMRRGGEGVRFEDVFILDQSMFYGMSXXXXXXXXXXXXXXNMSYEELLALEDR 1588
            +IRN LD MRRG E +RFEDV ILDQS+F+G++              NMSYEELLALE+R
Sbjct: 593  EIRNVLDLMRRG-EDLRFEDVMILDQSVFFGVADIHDRHRDMRLDVDNMSYEELLALEER 651

Query: 1589 IGNVSTGLSEETITKCLKQKKYLSFTIGVPSEVEPCCVCQEEYVDGDDLGRLDCGHDFHS 1768
            IG+V TGLSEE I K LKQ+KY S   G   EVEPCC+CQEEY DG+D+G L+CGHDFH 
Sbjct: 652  IGDVCTGLSEEXILKQLKQRKYWSVARGAEVEVEPCCICQEEYGDGEDIGTLECGHDFHY 711

Query: 1769 GCIKEWLTHKNLCPICKTTAL 1831
            GCIK+WL HKNLCPICKTTAL
Sbjct: 712  GCIKQWLMHKNLCPICKTTAL 732


>ref|XP_002301172.1| predicted protein [Populus trichocarpa] gi|222842898|gb|EEE80445.1|
            predicted protein [Populus trichocarpa]
          Length = 765

 Score =  191 bits (485), Expect = 6e-46
 Identities = 93/142 (65%), Positives = 105/142 (73%)
 Frame = +2

Query: 1412 IRNALDAMRRGGEGVRFEDVFILDQSMFYGMSXXXXXXXXXXXXXXNMSYEELLALEDRI 1591
            IRN LD MRRG E +RFEDV ILDQS+ +G +              NMSYEELLALE+RI
Sbjct: 626  IRNVLDLMRRG-ESLRFEDVMILDQSVLFGAADMYDRHRDMRLDVDNMSYEELLALEERI 684

Query: 1592 GNVSTGLSEETITKCLKQKKYLSFTIGVPSEVEPCCVCQEEYVDGDDLGRLDCGHDFHSG 1771
            GNVSTGLSEETI   LKQ+KY S  +G   E EPCC+CQEEY DG+DLG LDCGHDFH+G
Sbjct: 685  GNVSTGLSEETIVNNLKQQKY-SVAVGAKVEAEPCCICQEEYNDGEDLGTLDCGHDFHAG 743

Query: 1772 CIKEWLTHKNLCPICKTTALVT 1837
            C+K+WL HKN CPICKTT L T
Sbjct: 744  CVKQWLMHKNWCPICKTTGLAT 765


>ref|XP_003589164.1| Zinc finger protein [Medicago truncatula] gi|355478212|gb|AES59415.1|
            Zinc finger protein [Medicago truncatula]
          Length = 708

 Score =  189 bits (480), Expect = 2e-45
 Identities = 95/170 (55%), Positives = 118/170 (69%)
 Frame = +2

Query: 1328 SSDTIFELVFNMKTFFWTLHCSICFL*QIRNALDAMRRGGEGVRFEDVFILDQSMFYGMS 1507
            S+D+ F + +++++       S   + ++RN L  MRRGG  +RFEDV ILD SMF G++
Sbjct: 540  SADSEFGIPYSLRSLAAAGEGSSRLVSELRNVLGIMRRGGN-LRFEDVMILDHSMFAGIA 598

Query: 1508 XXXXXXXXXXXXXXNMSYEELLALEDRIGNVSTGLSEETITKCLKQKKYLSFTIGVPSEV 1687
                          NMSYEELLALE+RIGNVSTGL+EETI K LKQKKY    +G  SE 
Sbjct: 599  DMHDRHRDMRLDVDNMSYEELLALEERIGNVSTGLNEETIMKHLKQKKYSVDGLGSQSET 658

Query: 1688 EPCCVCQEEYVDGDDLGRLDCGHDFHSGCIKEWLTHKNLCPICKTTALVT 1837
            EPCCVCQEE+ + DD+G LDCGHD+H  CIK+WLTHKN+CPICKTT L T
Sbjct: 659  EPCCVCQEEFKNEDDIGSLDCGHDYHIDCIKQWLTHKNICPICKTTGLAT 708


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