BLASTX nr result

ID: Coptis23_contig00003865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003865
         (1070 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279835.1| PREDICTED: uncharacterized protein LOC100244...   358   1e-96
ref|XP_002528196.1| transcription factor, putative [Ricinus comm...   341   2e-91
ref|XP_004141778.1| PREDICTED: uncharacterized protein LOC101223...   330   5e-88
ref|XP_002281208.1| PREDICTED: uncharacterized protein LOC100245...   315   2e-83
emb|CBI36159.3| unnamed protein product [Vitis vinifera]              313   5e-83

>ref|XP_002279835.1| PREDICTED: uncharacterized protein LOC100244623 [Vitis vinifera]
          Length = 401

 Score =  358 bits (920), Expect = 1e-96
 Identities = 192/289 (66%), Positives = 212/289 (73%)
 Frame = -2

Query: 1000 ERHRKKRKLKSLAYGYEFAPRIAAAATPPSVTGSKPQSFGIGSGGRNSPADWSEHATFVL 821
            ERH+KKRKLKSL   YEFAPR+A    P +V    P+      GGRNS  DW+EH TFVL
Sbjct: 122  ERHQKKRKLKSLISSYEFAPRVAV---PSAVAAPAPKP---SFGGRNSLTDWTEHETFVL 175

Query: 820  LDAWGDRFLQLGRKSLRSEEWVEVAKKVSHGSKQVRTDTQCRNRLDTLXXXXXXXKMMLA 641
            LDAWGDRFL+LGRKSLRSEEW EVA+KVS  S+  RTDTQCRNRLDTL        M   
Sbjct: 176  LDAWGDRFLKLGRKSLRSEEWQEVAEKVSRESRTERTDTQCRNRLDTLKKKYKKENMKSG 235

Query: 640  ETGESSSKWTFFKKMDMLLXXXXXSRQPPGLSCGLDSGEYVFMNPKSYLNRSNGLDEMRD 461
            ETG  ++KW +FKKMDML+       +  GLSCGLDSGEYVFMNP+ YLNR NGLDEMRD
Sbjct: 236  ETGGGTNKWVYFKKMDMLMSAAP---RQAGLSCGLDSGEYVFMNPRVYLNRPNGLDEMRD 292

Query: 460  SPXXXXXXXXXXXXXXGLPPKRTRSVETEHGGSSFRLLADSIKKFGEIYEKIENSKRQQM 281
            SP              GLPPKR    +  + GSSFRLLA+SI+KF EIYEKIENSKRQQM
Sbjct: 293  SPGNSGSSGGEEDDSDGLPPKRKSCGQDNNEGSSFRLLANSIQKFSEIYEKIENSKRQQM 352

Query: 280  VELEKMRMDFHRDLELQKRQIMERAHAEIAKIRQGDDEEIDVSTGNTSG 134
            VELEKMRMDFHRDLELQKRQI+ERA AEIAKIRQGDDEE +VST N SG
Sbjct: 353  VELEKMRMDFHRDLELQKRQIVERAQAEIAKIRQGDDEETEVSTENVSG 401


>ref|XP_002528196.1| transcription factor, putative [Ricinus communis]
            gi|223532408|gb|EEF34203.1| transcription factor,
            putative [Ricinus communis]
          Length = 401

 Score =  341 bits (874), Expect = 2e-91
 Identities = 189/291 (64%), Positives = 214/291 (73%), Gaps = 2/291 (0%)
 Frame = -2

Query: 1000 ERHRKKRKLKSLAYGYEFAPRIAAAATPPSV--TGSKPQSFGIGSGGRNSPADWSEHATF 827
            ERH KKRKLKSL   YEFAPR+ A   PP+V  + SKP SF     GRN   DW+EH TF
Sbjct: 124  ERHPKKRKLKSLVSSYEFAPRVPA---PPAVAPSASKP-SFA----GRNPLTDWTEHETF 175

Query: 826  VLLDAWGDRFLQLGRKSLRSEEWVEVAKKVSHGSKQVRTDTQCRNRLDTLXXXXXXXKMM 647
            VLLDAWGD+FLQ GRKSLRSEEW EVA+KVS  SK  RTDTQCRNRLDTL       K+ 
Sbjct: 176  VLLDAWGDKFLQRGRKSLRSEEWQEVAEKVSEESKIERTDTQCRNRLDTLKKKYKKEKIN 235

Query: 646  LAETGESSSKWTFFKKMDMLLXXXXXSRQPPGLSCGLDSGEYVFMNPKSYLNRSNGLDEM 467
            L+ETG  +SKW +FKKMD+L+       Q  GLSCG+DSGEYVFMNP+ YL+R+NGLDEM
Sbjct: 236  LSETG-ITSKWVYFKKMDLLMSTPA---QQGGLSCGVDSGEYVFMNPRVYLSRANGLDEM 291

Query: 466  RDSPXXXXXXXXXXXXXXGLPPKRTRSVETEHGGSSFRLLADSIKKFGEIYEKIENSKRQ 287
            RDSP               LPPK+ +S    + GSSFR+LADSI+KF EIYEKIEN+KRQ
Sbjct: 292  RDSPENTESADEEEDSEG-LPPKKRKSRRDRNEGSSFRVLADSIQKFSEIYEKIENNKRQ 350

Query: 286  QMVELEKMRMDFHRDLELQKRQIMERAHAEIAKIRQGDDEEIDVSTGNTSG 134
            QM+ELEKMRMDFHRDLE+QKRQIMER  AEI KIRQGDDEE D+S  N SG
Sbjct: 351  QMLELEKMRMDFHRDLEMQKRQIMERTQAEIVKIRQGDDEENDISADNASG 401


>ref|XP_004141778.1| PREDICTED: uncharacterized protein LOC101223116 [Cucumis sativus]
            gi|449522534|ref|XP_004168281.1| PREDICTED:
            uncharacterized protein LOC101226171 [Cucumis sativus]
          Length = 385

 Score =  330 bits (845), Expect = 5e-88
 Identities = 186/292 (63%), Positives = 206/292 (70%), Gaps = 3/292 (1%)
 Frame = -2

Query: 1000 ERHRKKRKLKSLAYGYEFAPRIAAAATPPSVTGSKPQSFGIGSGGRNSPADWSEHATFVL 821
            ERH KKR+LK+L   YE APR+     PPS T S+ +SF    GGRNS  DW+EH T VL
Sbjct: 108  ERHPKKRRLKNLISNYELAPRMP----PPSSTPSQ-KSF---VGGRNSLTDWNEHETVVL 159

Query: 820  LDAWGDRFLQLGRKSLRSEEWVEVAKKVSHGSKQVRTDTQCRNRLDTLXXXXXXXKMMLA 641
            LDAWG+RFLQ GRKSLRSEEW EVA+KVS  SK  RTDTQCRNRLDTL       K    
Sbjct: 160  LDAWGERFLQHGRKSLRSEEWQEVAEKVSEVSKIDRTDTQCRNRLDTLKKKYKKEKSKST 219

Query: 640  ETGESSSKWTFFKKMDMLLXXXXXSRQPP---GLSCGLDSGEYVFMNPKSYLNRSNGLDE 470
            E G  +SKW +FKKMDML+        PP   GLSCGLDSGEYVFMNP++YLNR+NGLDE
Sbjct: 220  EMGGPTSKWVYFKKMDMLMS------SPPNQGGLSCGLDSGEYVFMNPRAYLNRANGLDE 273

Query: 469  MRDSPXXXXXXXXXXXXXXGLPPKRTRSVETEHGGSSFRLLADSIKKFGEIYEKIENSKR 290
            MRDSP              GLPPK+         GSSFR+LADSI KF EIYEKIE+SKR
Sbjct: 274  MRDSPDNSESDDCEDDELDGLPPKKRIYGRNNEDGSSFRMLADSIHKFSEIYEKIESSKR 333

Query: 289  QQMVELEKMRMDFHRDLELQKRQIMERAHAEIAKIRQGDDEEIDVSTGNTSG 134
            QQM+ELEKMRMDF RDLELQKRQIMERA AEIAK+RQGDDEE   S  + SG
Sbjct: 334  QQMMELEKMRMDFLRDLELQKRQIMERAQAEIAKLRQGDDEEYGASAKSASG 385


>ref|XP_002281208.1| PREDICTED: uncharacterized protein LOC100245606 isoform 1 [Vitis
           vinifera] gi|359484599|ref|XP_003633126.1| PREDICTED:
           uncharacterized protein LOC100245606 isoform 2 [Vitis
           vinifera] gi|359484601|ref|XP_003633127.1| PREDICTED:
           uncharacterized protein LOC100245606 isoform 3 [Vitis
           vinifera] gi|359484603|ref|XP_003633128.1| PREDICTED:
           uncharacterized protein LOC100245606 isoform 4 [Vitis
           vinifera] gi|147803403|emb|CAN71046.1| hypothetical
           protein VITISV_022008 [Vitis vinifera]
          Length = 366

 Score =  315 bits (806), Expect = 2e-83
 Identities = 168/286 (58%), Positives = 202/286 (70%), Gaps = 1/286 (0%)
 Frame = -2

Query: 988 KKRKLKSLAYGYEFAPRIAAAATPPSVTGSKPQSFGIGSGGRNSPADWSEHATFVLLDAW 809
           KKRKL+ L   YEFAPR+             P +  +  GGRNS A+W+EH TF+LL+AW
Sbjct: 95  KKRKLRDLVNNYEFAPRVVP-----------PPTSRLPFGGRNSSAEWTEHETFLLLEAW 143

Query: 808 GDRFLQLGRKSLRSEEWVEVAKKVSHGSKQVRTDTQCRNRLDTLXXXXXXXKMMLAETGE 629
           G+RF+QLGRKSLRS++W +VA+KVS GSK  RTD QCRNRLDTL       +  + E G 
Sbjct: 144 GERFVQLGRKSLRSDDWADVAEKVSEGSKIERTDMQCRNRLDTLKKKYKKERAKVEEMGG 203

Query: 628 SSSKWTFFKKMDMLL-XXXXXSRQPPGLSCGLDSGEYVFMNPKSYLNRSNGLDEMRDSPX 452
            +SKW F+KKMD L+      SRQ  GL+CG+DSGEYVFMNP+ YLNRSNGLDEMRDSP 
Sbjct: 204 GNSKWVFYKKMDALMGLSPTPSRQQYGLACGVDSGEYVFMNPRVYLNRSNGLDEMRDSP- 262

Query: 451 XXXXXXXXXXXXXGLPPKRTRSVETEHGGSSFRLLADSIKKFGEIYEKIENSKRQQMVEL 272
                        GLP KRT     +  GSS RLLADSI+KFGEIYEKIE +KRQQM+EL
Sbjct: 263 --GNSEYGDDDSEGLPLKRTNPGGDDEEGSSIRLLADSIEKFGEIYEKIEKTKRQQMMEL 320

Query: 271 EKMRMDFHRDLELQKRQIMERAHAEIAKIRQGDDEEIDVSTGNTSG 134
           EKMRMDFHR+LEL++++++ER  AEIAKIRQGDDE+ D S  N SG
Sbjct: 321 EKMRMDFHRELELRRKEMLERTQAEIAKIRQGDDEDTDASDENYSG 366


>emb|CBI36159.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  313 bits (802), Expect = 5e-83
 Identities = 174/288 (60%), Positives = 193/288 (67%)
 Frame = -2

Query: 1000 ERHRKKRKLKSLAYGYEFAPRIAAAATPPSVTGSKPQSFGIGSGGRNSPADWSEHATFVL 821
            ERH+KKRKLKSL   YEFAPR+A    P +V    P+      GGRNS  DW+EH TFVL
Sbjct: 87   ERHQKKRKLKSLISSYEFAPRVAV---PSAVAAPAPKP---SFGGRNSLTDWTEHETFVL 140

Query: 820  LDAWGDRFLQLGRKSLRSEEWVEVAKKVSHGSKQVRTDTQCRNRLDTLXXXXXXXKMMLA 641
            LDAWGDRFL+LGRKSLRSEEW EVA+KVS  S+  RTDTQCRNRLDTL        M   
Sbjct: 141  LDAWGDRFLKLGRKSLRSEEWQEVAEKVSRESRTERTDTQCRNRLDTLKKKYKKENMKSG 200

Query: 640  ETGESSSKWTFFKKMDMLLXXXXXSRQPPGLSCGLDSGEYVFMNPKSYLNRSNGLDEMRD 461
            ETG  ++KW +FKKMDML+                            YLNR NGLDEMRD
Sbjct: 201  ETGGGTNKWVYFKKMDMLMSAAPL-----------------------YLNRPNGLDEMRD 237

Query: 460  SPXXXXXXXXXXXXXXGLPPKRTRSVETEHGGSSFRLLADSIKKFGEIYEKIENSKRQQM 281
            SP              GLPPKR    +  + GSSFRLLA+SI+KF EIYEKIENSKRQQM
Sbjct: 238  SPGNSGSSGGEEDDSDGLPPKRKSCGQDNNEGSSFRLLANSIQKFSEIYEKIENSKRQQM 297

Query: 280  VELEKMRMDFHRDLELQKRQIMERAHAEIAKIRQGDDEEIDVSTGNTS 137
            VELEKMRMDFHRDLELQKRQI+ERA AEIAKIRQGDDEE +VST N +
Sbjct: 298  VELEKMRMDFHRDLELQKRQIVERAQAEIAKIRQGDDEETEVSTENVN 345


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