BLASTX nr result
ID: Coptis23_contig00003663
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003663
(1829 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284787.1| PREDICTED: seryl-tRNA synthetase [Vitis vini... 779 0.0
ref|XP_002514398.1| seryl-tRNA synthetase, putative [Ricinus com... 756 0.0
ref|XP_002519916.1| seryl-tRNA synthetase, putative [Ricinus com... 746 0.0
ref|XP_003536082.1| PREDICTED: seryl-tRNA synthetase-like [Glyci... 744 0.0
ref|XP_003556504.1| PREDICTED: seryl-tRNA synthetase-like [Glyci... 738 0.0
>ref|XP_002284787.1| PREDICTED: seryl-tRNA synthetase [Vitis vinifera]
gi|296088317|emb|CBI36762.3| unnamed protein product
[Vitis vinifera]
Length = 447
Score = 779 bits (2012), Expect = 0.0
Identities = 374/447 (83%), Positives = 413/447 (92%)
Frame = +3
Query: 147 MLDINLFREDKGYNPELVRESLRHRFKNVSIVDEIINLDKEWRQRQFELDGLRRDFNKIN 326
MLDINLFREDKG+NPE++RES R R+ NV +VDE+I+LDKEWRQRQFE + LR++FNKIN
Sbjct: 1 MLDINLFREDKGHNPEIIRESQRRRYANVELVDEVIHLDKEWRQRQFEYENLRKEFNKIN 60
Query: 327 KEVAKLKISGGDASEKIRDTDDNKRLTAEKEIEVQTAKTDLYARLEIVGNLVHDSVPISN 506
K+VAKLKISG DASE I+ TD+NKRLT++KE EVQ A L ++LEI+GNLVHDSVP+SN
Sbjct: 61 KQVAKLKISGEDASEMIKSTDENKRLTSKKEAEVQEALAALNSKLEIIGNLVHDSVPVSN 120
Query: 507 DEANNRVERTWGEKRMEPKLKNHVELVELLGIADLKKGANVAGGRGFYLKGAGVLLNQAL 686
DEANN V R+WGEK++EPKLKNHVELVELLGIADLKKGAN+AGGRGFYLKG GV LNQAL
Sbjct: 121 DEANNAVIRSWGEKKVEPKLKNHVELVELLGIADLKKGANIAGGRGFYLKGDGVRLNQAL 180
Query: 687 INFGLMFLAKRDYTPLQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 866
INFGL FL KR YT LQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL
Sbjct: 181 INFGLDFLEKRGYTALQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
Query: 867 CAYHIDEWIHPSGLPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITTPDDNK 1046
CAYH+D+WIHPS LP+RYAGYS+CFRKEAGSHGRDTLGIFRVHQFEK+EQFCIT+P+ N
Sbjct: 241 CAYHLDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGND 300
Query: 1047 SWEMHEEMITNSEDFYKELNIPYQVVSIVSGALNDAAAKKYDLEGWFPASKTYRELVSCS 1226
SW+MHEEMI NSEDFYK LNIPYQVV+IVSGALNDAAAKKYDLEGWFPAS+TYRELVSCS
Sbjct: 301 SWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEGWFPASQTYRELVSCS 360
Query: 1227 NCTDYQSRRLEIRYGQKKSNEQVKQYVHLLNSTLTATERTICCILENHQKENGVEIPAAL 1406
NCTDYQSRRLEIRYGQKKSNEQ+KQYVHLLNSTLTATERTICCILEN+QKE+GVE+P L
Sbjct: 361 NCTDYQSRRLEIRYGQKKSNEQIKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEPL 420
Query: 1407 QPFMGGTTFLPFQTSQTTDGKGKKSKA 1487
+PFMGG TFLPFQTS T+ KGKKSKA
Sbjct: 421 RPFMGGKTFLPFQTSPATEAKGKKSKA 447
>ref|XP_002514398.1| seryl-tRNA synthetase, putative [Ricinus communis]
gi|223546495|gb|EEF47994.1| seryl-tRNA synthetase,
putative [Ricinus communis]
Length = 447
Score = 756 bits (1952), Expect = 0.0
Identities = 368/447 (82%), Positives = 403/447 (90%)
Frame = +3
Query: 147 MLDINLFREDKGYNPELVRESLRHRFKNVSIVDEIINLDKEWRQRQFELDGLRRDFNKIN 326
MLDINLFREDKG+NP+L+RES R RF NV++V EII LDKEWRQRQ+ELD LR+DFNKIN
Sbjct: 1 MLDINLFREDKGHNPQLIRESQRRRFANVNVVGEIILLDKEWRQRQYELDNLRKDFNKIN 60
Query: 327 KEVAKLKISGGDASEKIRDTDDNKRLTAEKEIEVQTAKTDLYARLEIVGNLVHDSVPISN 506
K VAKLKI+G DA+E I+DT++NKRLTAEKE +VQ A L +LE VGNLVHDSVP+SN
Sbjct: 61 KLVAKLKIAGEDATEMIKDTNENKRLTAEKEAQVQEAALALNKKLEEVGNLVHDSVPVSN 120
Query: 507 DEANNRVERTWGEKRMEPKLKNHVELVELLGIADLKKGANVAGGRGFYLKGAGVLLNQAL 686
DEANN V R WGEKR+EPKLKNHV+LVELLGIAD KKGANVAGGRGFYLKG GV LNQAL
Sbjct: 121 DEANNAVIRVWGEKRLEPKLKNHVDLVELLGIADTKKGANVAGGRGFYLKGDGVRLNQAL 180
Query: 687 INFGLMFLAKRDYTPLQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 866
IN L FL KR YT LQTPFFMRKDIMAKCAQLAQFDEELYKVTGEG+DKYLIATAEQPL
Sbjct: 181 INVALDFLEKRGYTALQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGEDKYLIATAEQPL 240
Query: 867 CAYHIDEWIHPSGLPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITTPDDNK 1046
CAYH+D+WIHPS LPIRYAGYS+CFRKEAGSHGRDTLGIFRVHQFEK+EQFCIT+P+ N
Sbjct: 241 CAYHLDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGND 300
Query: 1047 SWEMHEEMITNSEDFYKELNIPYQVVSIVSGALNDAAAKKYDLEGWFPASKTYRELVSCS 1226
SW+MHEEMI NSEDFYK LNIPYQVV+IVSGALNDAAAKKYDLE WFPAS TYRELVSCS
Sbjct: 301 SWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASNTYRELVSCS 360
Query: 1227 NCTDYQSRRLEIRYGQKKSNEQVKQYVHLLNSTLTATERTICCILENHQKENGVEIPAAL 1406
NCTDYQSR+LEIRYGQKK+NEQ KQYVHLLNSTLTATERT+CCILEN+QKENGVEIP L
Sbjct: 361 NCTDYQSRKLEIRYGQKKNNEQAKQYVHLLNSTLTATERTLCCILENYQKENGVEIPEPL 420
Query: 1407 QPFMGGTTFLPFQTSQTTDGKGKKSKA 1487
+ +MGG +FLPFQ + T+GKGKKSKA
Sbjct: 421 RGYMGGKSFLPFQNNPPTEGKGKKSKA 447
>ref|XP_002519916.1| seryl-tRNA synthetase, putative [Ricinus communis]
gi|223540962|gb|EEF42520.1| seryl-tRNA synthetase,
putative [Ricinus communis]
Length = 447
Score = 746 bits (1927), Expect = 0.0
Identities = 366/447 (81%), Positives = 399/447 (89%)
Frame = +3
Query: 147 MLDINLFREDKGYNPELVRESLRHRFKNVSIVDEIINLDKEWRQRQFELDGLRRDFNKIN 326
MLDINLFREDKG+N EL+ ES R RF NV+IVDEII LDKEWRQRQFELD LR+DFNKIN
Sbjct: 1 MLDINLFREDKGHNSELIWESQRRRFANVNIVDEIILLDKEWRQRQFELDNLRKDFNKIN 60
Query: 327 KEVAKLKISGGDASEKIRDTDDNKRLTAEKEIEVQTAKTDLYARLEIVGNLVHDSVPISN 506
K+VAKLKI+G DA+E I +T++NKRL+AEKE +VQ A L +LE VGNLVHDSVPISN
Sbjct: 61 KQVAKLKIAGEDATEMINNTNENKRLSAEKEAQVQEAALALNKKLEQVGNLVHDSVPISN 120
Query: 507 DEANNRVERTWGEKRMEPKLKNHVELVELLGIADLKKGANVAGGRGFYLKGAGVLLNQAL 686
DEANN V R WGEKR EPKLKNHVELVE LGIAD KKGANVAGGRG+YLKGAGV LNQAL
Sbjct: 121 DEANNFVIRVWGEKRWEPKLKNHVELVEFLGIADTKKGANVAGGRGYYLKGAGVRLNQAL 180
Query: 687 INFGLMFLAKRDYTPLQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 866
INFGL FL KR YT LQTPFFMRKD+MAKCAQLAQFDEELYKVTGEGDDKYLI TAEQPL
Sbjct: 181 INFGLDFLEKRGYTALQTPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKYLIGTAEQPL 240
Query: 867 CAYHIDEWIHPSGLPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITTPDDNK 1046
CAYH+D+WIHPS LPIRYAGYS+CF KEAGSHGRDTLGIFRVHQFEK+EQFC T+P+ N
Sbjct: 241 CAYHLDDWIHPSQLPIRYAGYSSCFCKEAGSHGRDTLGIFRVHQFEKVEQFCNTSPNGND 300
Query: 1047 SWEMHEEMITNSEDFYKELNIPYQVVSIVSGALNDAAAKKYDLEGWFPASKTYRELVSCS 1226
SW MHEEMI NSEDFYK LNIPYQVV+IVSGALNDAAAKKYDLE WFPAS+T RELVSCS
Sbjct: 301 SWAMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASETCRELVSCS 360
Query: 1227 NCTDYQSRRLEIRYGQKKSNEQVKQYVHLLNSTLTATERTICCILENHQKENGVEIPAAL 1406
NCTDYQSR+LEIRYGQKKSNEQ KQYVHLLNSTLTATERT+CCILEN+QKENG+EIP L
Sbjct: 361 NCTDYQSRKLEIRYGQKKSNEQAKQYVHLLNSTLTATERTLCCILENYQKENGIEIPEPL 420
Query: 1407 QPFMGGTTFLPFQTSQTTDGKGKKSKA 1487
+ +MGG +FLPFQ + +T+GKGKK KA
Sbjct: 421 RVYMGGVSFLPFQNNASTEGKGKKFKA 447
>ref|XP_003536082.1| PREDICTED: seryl-tRNA synthetase-like [Glycine max]
Length = 447
Score = 744 bits (1922), Expect = 0.0
Identities = 357/447 (79%), Positives = 406/447 (90%)
Frame = +3
Query: 147 MLDINLFREDKGYNPELVRESLRHRFKNVSIVDEIINLDKEWRQRQFELDGLRRDFNKIN 326
MLDINLFRE+KG+NPEL+RES R RF +V IVDE+INLDKEWR+RQFEL+ LR++FNKIN
Sbjct: 1 MLDINLFREEKGHNPELIRESQRRRFASVEIVDEVINLDKEWRKRQFELENLRKEFNKIN 60
Query: 327 KEVAKLKISGGDASEKIRDTDDNKRLTAEKEIEVQTAKTDLYARLEIVGNLVHDSVPISN 506
KEV+KLK +G DAS+ I ++++ K+ AEKE+EV+ L ++LE +GNLVHDSVPISN
Sbjct: 61 KEVSKLKRAGEDASKFITESEETKKSIAEKEVEVRETLNLLNSKLETIGNLVHDSVPISN 120
Query: 507 DEANNRVERTWGEKRMEPKLKNHVELVELLGIADLKKGANVAGGRGFYLKGAGVLLNQAL 686
DEANN V R+WGEKR+EPKLKNHV+LVELLGIAD KKGA+VAGGRGFYLKG GV LNQAL
Sbjct: 121 DEANNVVVRSWGEKRVEPKLKNHVDLVELLGIADTKKGADVAGGRGFYLKGDGVRLNQAL 180
Query: 687 INFGLMFLAKRDYTPLQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 866
INFGL FL KR+YT L TPFFMRKDIM+KCAQLAQFDEELYKVTGEGDDKYLIATAEQPL
Sbjct: 181 INFGLDFLDKREYTLLHTPFFMRKDIMSKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
Query: 867 CAYHIDEWIHPSGLPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITTPDDNK 1046
CAYH+D+WIHP+ LPIRYAGYS+CFRKEAGSHGRDTLGIFRVHQFEK+EQFC+T+P+DN
Sbjct: 241 CAYHLDDWIHPTQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCLTSPNDND 300
Query: 1047 SWEMHEEMITNSEDFYKELNIPYQVVSIVSGALNDAAAKKYDLEGWFPASKTYRELVSCS 1226
SW+MHEEM+ NSEDFYK LN+PYQVVSIVSGALNDAAAKKYDLE WFPAS+ YRELVSCS
Sbjct: 301 SWDMHEEMLKNSEDFYKALNLPYQVVSIVSGALNDAAAKKYDLEAWFPASQAYRELVSCS 360
Query: 1227 NCTDYQSRRLEIRYGQKKSNEQVKQYVHLLNSTLTATERTICCILENHQKENGVEIPAAL 1406
NCTDYQ+RRLEIRYGQKKSNEQ+KQYVHLLNSTLTATERTICCILEN+QKE+GVEIP L
Sbjct: 361 NCTDYQARRLEIRYGQKKSNEQMKQYVHLLNSTLTATERTICCILENNQKEDGVEIPEVL 420
Query: 1407 QPFMGGTTFLPFQTSQTTDGKGKKSKA 1487
+PFMGG TFLPF++ + + KGKKSKA
Sbjct: 421 RPFMGGKTFLPFKSQPSNEAKGKKSKA 447
>ref|XP_003556504.1| PREDICTED: seryl-tRNA synthetase-like [Glycine max]
Length = 447
Score = 738 bits (1906), Expect = 0.0
Identities = 352/447 (78%), Positives = 403/447 (90%)
Frame = +3
Query: 147 MLDINLFREDKGYNPELVRESLRHRFKNVSIVDEIINLDKEWRQRQFELDGLRRDFNKIN 326
MLDINLFRE+KG+NPE +RES R RF +V +VDE+INLDKEWR+RQFEL+ LR++FNKIN
Sbjct: 1 MLDINLFREEKGHNPEFIRESQRRRFASVEVVDEVINLDKEWRKRQFELENLRKEFNKIN 60
Query: 327 KEVAKLKISGGDASEKIRDTDDNKRLTAEKEIEVQTAKTDLYARLEIVGNLVHDSVPISN 506
KEV+KLK +G DA++ I ++++ K+ EKE+EV+ L ++LE +GNLVHDSVPIS
Sbjct: 61 KEVSKLKRAGEDATKFISESEETKKSIGEKEVEVRETLNLLNSKLETIGNLVHDSVPISQ 120
Query: 507 DEANNRVERTWGEKRMEPKLKNHVELVELLGIADLKKGANVAGGRGFYLKGAGVLLNQAL 686
DEANN V R+WGEKR+EPKLKNHV+LVELLGIAD KKGA+VAGGRGFYLKG GV LNQAL
Sbjct: 121 DEANNVVVRSWGEKRVEPKLKNHVDLVELLGIADTKKGADVAGGRGFYLKGDGVRLNQAL 180
Query: 687 INFGLMFLAKRDYTPLQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 866
INFGL FL KR+YT L TPFFMRKDIM+KCAQLAQFDEELYKVTGEGDDKYLIATAEQPL
Sbjct: 181 INFGLDFLEKREYTLLHTPFFMRKDIMSKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
Query: 867 CAYHIDEWIHPSGLPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITTPDDNK 1046
CAYH+D+WIHP+ LP+RYAGYS+CFRKEAGSHGRDTLGIFRVHQFEK+EQFC+T+P+DN
Sbjct: 241 CAYHLDDWIHPTQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCLTSPNDND 300
Query: 1047 SWEMHEEMITNSEDFYKELNIPYQVVSIVSGALNDAAAKKYDLEGWFPASKTYRELVSCS 1226
SW+MHEEM+ NSEDFYK LN+PYQVVSIVSGALNDAAAKKYDLE WFPAS+ YRELVSCS
Sbjct: 301 SWDMHEEMLKNSEDFYKALNLPYQVVSIVSGALNDAAAKKYDLEAWFPASQAYRELVSCS 360
Query: 1227 NCTDYQSRRLEIRYGQKKSNEQVKQYVHLLNSTLTATERTICCILENHQKENGVEIPAAL 1406
NCTDYQ+RRLEIRYGQKKSNEQ+KQYVHLLNSTLTATERTICCILEN+QKE+GVEIP AL
Sbjct: 361 NCTDYQARRLEIRYGQKKSNEQMKQYVHLLNSTLTATERTICCILENNQKEDGVEIPEAL 420
Query: 1407 QPFMGGTTFLPFQTSQTTDGKGKKSKA 1487
+PFMGG TFLPF+ + + KGKKSKA
Sbjct: 421 RPFMGGKTFLPFKNQPSNEAKGKKSKA 447