BLASTX nr result
ID: Coptis23_contig00002599
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00002599
(1606 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274072.1| PREDICTED: putative E3 ubiquitin-protein lig... 442 e-121
gb|ABG37641.1| auxin-regulated protein-like protein [Populus tri... 432 e-118
ref|XP_004167338.1| PREDICTED: putative E3 ubiquitin-protein lig... 422 e-115
ref|XP_004134060.1| PREDICTED: putative E3 ubiquitin-protein lig... 421 e-115
emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera] 403 e-110
>ref|XP_002274072.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35 [Vitis
vinifera] gi|302143289|emb|CBI21850.3| unnamed protein
product [Vitis vinifera]
Length = 497
Score = 442 bits (1137), Expect = e-121
Identities = 251/517 (48%), Positives = 313/517 (60%), Gaps = 1/517 (0%)
Frame = -2
Query: 1548 MGLQQSKEALLYQQVIDGNIEGIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 1369
MG +QSK+ LLYQ V GNIE IKAL REGASLEWFD E KT LIVAC + L VA+TL
Sbjct: 8 MGGRQSKDELLYQHVATGNIEAIKALCREGASLEWFDSEAKTPLIVACMDSNLIMVAQTL 67
Query: 1368 IQLGANVNAYRPGGHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVEVARVKG 1189
I LGANVNAYRPG AGT LHHA K+GLDQTVKLLLS GAN L NDD +T ++VAR+ G
Sbjct: 68 IDLGANVNAYRPGREAGTPLHHAAKRGLDQTVKLLLSKGANALVRNDDGQTSLDVARING 127
Query: 1188 HYNVVRTIESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSRNXXXXXXXXX 1009
+ NVVRTIE+HIC FSGWLREL+GPGF++ AP LLS+KIWVV++P G N
Sbjct: 128 YINVVRTIENHICLFSGWLRELHGPGFLKALAPQLLSRKIWVVIIPSGFNN---PSKPLR 184
Query: 1008 LELAMYNSLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKSTKKKFRLASSDEGERQQ 829
LEL +Y++ QDA+P T IAL +EEPKF+Q P + IFDKS K +++LAS++EG++QQ
Sbjct: 185 LELVIYSNFQDAQPCTVIALGNVNIEEPKFHQSDPALIIFDKSNKTRYKLASANEGDKQQ 244
Query: 828 LQWLSNACRGIPQVMHPTLLTNAHTSVVPPTMPPPNGDDVELAMAGNASLLAAREEMPRI 649
L+WL NACRGIPQV+ +L +A S VP + + ELAMA AS+ +A + P +
Sbjct: 245 LRWLYNACRGIPQVLPTPMLHDARPS-VPASQTAT--EAAELAMAVGASIQSAAVDQPVL 301
Query: 648 MDS-HSSPEFSNAIGWGSSADISSHNGWLXXXXXXXXXXXXXGWLVEPAEEAYNGWGTSE 472
+ S E S+ GWG+ D +SH GW GW E +NG G E
Sbjct: 302 LSSTRLGSEASSTNGWGNPVDNTSHGGWSLDGTPTHSASSSSGWADESKRGEFNGLGVPE 361
Query: 471 TESSSNRTQQNISAPXXXXXXXXXXXXXXXXSAFSSKESCGGWLNNQSENVQNGWGMSET 292
+ N+TQ N + NN + VQ
Sbjct: 362 SRLIRNQTQLNKTQ------------------------------NNIPQVVQT------- 384
Query: 291 GSRSNQNNSTSVPLTHATPQTASVPSAPPVPEGADDGPIQYPSIDFSPVDWTMPNMDNKD 112
SN N + P PSAPP+PE +GP+ YP ID SPVD ++P +
Sbjct: 385 ---SNTNPVLASP----------APSAPPIPEALTEGPVYYPPIDLSPVDLSVPAAEYDA 431
Query: 111 SRTSQAKEDGGASSSCVICLDAPVEGACVPCGHMAGC 1
+ TS+ K D G SSSCVIC +AP+EGAC+PCGHMAGC
Sbjct: 432 AGTSKTK-DKGDSSSCVICWEAPIEGACIPCGHMAGC 467
>gb|ABG37641.1| auxin-regulated protein-like protein [Populus trichocarpa]
Length = 499
Score = 432 bits (1111), Expect = e-118
Identities = 242/521 (46%), Positives = 314/521 (60%), Gaps = 2/521 (0%)
Frame = -2
Query: 1557 IEVMGLQQSKEALLYQQVIDGNIEGIKALHREGASLEWFDKEGKTALIVACTNPQLYDVA 1378
++ M +QSK+ LLYQ I GN++ +KAL EGA LEW D++GKT LIVAC + LY+VA
Sbjct: 5 LDSMTQKQSKDELLYQLAIAGNVDAVKALCSEGAILEWIDRDGKTPLIVACMDSGLYNVA 64
Query: 1377 KTLIQLGANVNAYRPGGHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVEVAR 1198
K LI++GANVNAYRPG HAGT LHHAVK+GL+QTVKLLLS GAN L NDD +T ++VAR
Sbjct: 65 KVLIEMGANVNAYRPGRHAGTPLHHAVKRGLEQTVKLLLSSGANALVRNDDCQTALDVAR 124
Query: 1197 VKGHYNVVRTIESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSRNXXXXXX 1018
+KG+ N+VRTIESHIC+F+GWLRE YGPGF+ FAP LS+KIW V+P GS N
Sbjct: 125 IKGNINIVRTIESHICYFTGWLREFYGPGFLRAFAPQFLSRKIWAAVIPQGSSN---PMT 181
Query: 1017 XXXLELAMYNSLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKSTKKKFRLASSDEGE 838
LEL +Y S QD +PRT IALW A++EEP F +P P + IFD+STK +++LAS++EG+
Sbjct: 182 PKKLELVIYPSSQDVQPRTVIALWNAEIEEPNFNRPDPELTIFDQSTKTQYKLASANEGD 241
Query: 837 RQQLQWLSNACRGIPQVMHPTLLTNAHTSVVPPTMPPPNGDDVELAMA-GNASLLAAREE 661
+QQL WL +AC GIPQVM P + N T+ VP + + V AMA G S+ + E+
Sbjct: 242 KQQLHWLYDACSGIPQVMLPPMYGNPPTT-VPVVGHHTSAEAVGSAMAIGGGSIQSTTED 300
Query: 660 MPRIMDSHSSPEFSNAIGWGSSADISSHNGWLXXXXXXXXXXXXXGWLVEPAEEAYNGWG 481
P ++H S E NA GW SHN W GW+ E +E +NG
Sbjct: 301 NPLHPNTHQSSEVINANGWEDPVRGDSHNRWGVTVASTHSEARSSGWMGEAPKEDHNGCA 360
Query: 480 TSETESSSNRTQQNISAPXXXXXXXXXXXXXXXXSAFSSKESCGGWLNNQSENVQNGWGM 301
S ++ ++VQ + +
Sbjct: 361 VPNMGPSGSQ-----------------------------------------DHVQTRYDI 379
Query: 300 SETGSRSNQNNSTSVPLTHATPQTASVPSAPPVP-EGADDGPIQYPSIDFSPVDWTMPNM 124
S ++ N+ SVP S PSAPP+P E D GPI YPS DFS +D ++P +
Sbjct: 380 PPV-SETSGGNTASVP---------SAPSAPPIPDEELDAGPIHYPSFDFSLLDLSVPAI 429
Query: 123 DNKDSRTSQAKEDGGASSSCVICLDAPVEGACVPCGHMAGC 1
+ S TS + GG SSSC+IC +APVEGAC+PCGHMAGC
Sbjct: 430 ELGASVTSDVNK-GGTSSSCIICWEAPVEGACIPCGHMAGC 469
>ref|XP_004167338.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like [Cucumis
sativus]
Length = 459
Score = 422 bits (1084), Expect = e-115
Identities = 241/516 (46%), Positives = 301/516 (58%)
Frame = -2
Query: 1548 MGLQQSKEALLYQQVIDGNIEGIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 1369
MG QQSK+ LLYQQV GN EGIKAL R+GA LEW DKE KT LIVAC NP+L++VA+TL
Sbjct: 1 MGQQQSKDELLYQQVSYGNTEGIKALCRDGAGLEWIDKEAKTPLIVACMNPELHNVARTL 60
Query: 1368 IQLGANVNAYRPGGHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVEVARVKG 1189
I+LGANVNAYRPG H GT LHHA K+GL+ VKLLLS+GANPL +NDD ++P++VAR KG
Sbjct: 61 IELGANVNAYRPGRHNGTPLHHAAKRGLENNVKLLLSNGANPLIMNDDCQSPLDVARAKG 120
Query: 1188 HYNVVRTIESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSRNXXXXXXXXX 1009
H NVVRTIESHIC FSGWLRE YGPGF+E+ AP L+S+K+W V+LPCG+RN
Sbjct: 121 HSNVVRTIESHICLFSGWLREFYGPGFLELLAPQLVSRKVWAVILPCGARN---LSKPFK 177
Query: 1008 LELAMYNSLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKSTKKKFRLASSDEGERQQ 829
LELA+Y SLQDA+PRT + LWKA +++ K P V I D + K + +LAS +E +++Q
Sbjct: 178 LELAIYTSLQDAQPRTVVQLWKADLDQSKLQHSDPSVMIVDNAAKTRLKLASGNENDKEQ 237
Query: 828 LQWLSNACRGIPQVMHPTLLTNAHTSVVPPTMPPPNGDDVELAMAGNASLLAAREEMPRI 649
LQW NAC+GI +MHPT ++ H V T PP+ +DVELAMA NAS+ + P
Sbjct: 238 LQWFCNACKGITSMMHPTFMSGNHGPGVSAT-APPDSEDVELAMAINASIQSVIHGRPPF 296
Query: 648 MDSHSSPEFSNAIGWGSSADISSHNGWLXXXXXXXXXXXXXGWLVEPAEEAYNGWGTSET 469
D + S E S + SSH G P + +
Sbjct: 297 PDPNPSSEASTS---------SSHTG--------------------PVGQTTHSTKLGTN 327
Query: 468 ESSSNRTQQNISAPXXXXXXXXXXXXXXXXSAFSSKESCGGWLNNQSENVQNGWGMSETG 289
ES N Q+I+A N+ +Q
Sbjct: 328 ESEMNEAGQSITA-------------------------------NEHPQIQ--------- 347
Query: 288 SRSNQNNSTSVPLTHATPQTASVPSAPPVPEGADDGPIQYPSIDFSPVDWTMPNMDNKDS 109
T+V A P S P A E D+G I YPSID SP+D + N
Sbjct: 348 --------TNVTPPDAVP---SAPLA--ADEILDNGAIHYPSIDSSPIDLSSQTAHNAPL 394
Query: 108 RTSQAKEDGGASSSCVICLDAPVEGACVPCGHMAGC 1
+ + K D +SSSCVICLDAPV+GAC+PCGHMAGC
Sbjct: 395 QAGEGK-DETSSSSCVICLDAPVQGACIPCGHMAGC 429
>ref|XP_004134060.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like [Cucumis
sativus]
Length = 459
Score = 421 bits (1083), Expect = e-115
Identities = 241/516 (46%), Positives = 301/516 (58%)
Frame = -2
Query: 1548 MGLQQSKEALLYQQVIDGNIEGIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 1369
MG QQSK+ LLYQQV GN EGIKAL R+GA LEW DKE KT LIVAC NP+L++VA+TL
Sbjct: 1 MGQQQSKDELLYQQVSYGNTEGIKALCRDGAGLEWIDKEAKTPLIVACMNPELHNVARTL 60
Query: 1368 IQLGANVNAYRPGGHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVEVARVKG 1189
I+LGANVNAYRPG H GT LHHA K+GL+ VKLLLS+GANPL +NDD ++P++VAR KG
Sbjct: 61 IELGANVNAYRPGRHNGTPLHHAAKRGLENNVKLLLSNGANPLIMNDDCQSPLDVARAKG 120
Query: 1188 HYNVVRTIESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSRNXXXXXXXXX 1009
H NVVRTIESHIC FSGWLRE YGPGF+E+ AP L+S+K+W V+LPCG+RN
Sbjct: 121 HSNVVRTIESHICLFSGWLREFYGPGFLELLAPQLVSRKVWAVILPCGARN---LSKPFK 177
Query: 1008 LELAMYNSLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKSTKKKFRLASSDEGERQQ 829
LELA+Y SLQDA+PRT + LWKA +++ K P V I D + K + +LAS +E +++Q
Sbjct: 178 LELAIYTSLQDAQPRTVVQLWKADLDQSKLQHSDPSVMIVDNAAKTRLKLASGNENDKEQ 237
Query: 828 LQWLSNACRGIPQVMHPTLLTNAHTSVVPPTMPPPNGDDVELAMAGNASLLAAREEMPRI 649
LQW NAC+GI +MHPT ++ H V T PP+ +DVELAMA NAS+ + P
Sbjct: 238 LQWFCNACKGITSMMHPTFMSGNHGPGVSAT-APPDSEDVELAMAINASIQSVIHGRPPF 296
Query: 648 MDSHSSPEFSNAIGWGSSADISSHNGWLXXXXXXXXXXXXXGWLVEPAEEAYNGWGTSET 469
D + S E S + SSH G P + +
Sbjct: 297 PDPNPSSEASTS---------SSHTG--------------------PVGQTTHSTKLGTN 327
Query: 468 ESSSNRTQQNISAPXXXXXXXXXXXXXXXXSAFSSKESCGGWLNNQSENVQNGWGMSETG 289
ES N Q+I+A N+ +Q
Sbjct: 328 ESEMNEAGQSITA-------------------------------NEHPQIQ--------- 347
Query: 288 SRSNQNNSTSVPLTHATPQTASVPSAPPVPEGADDGPIQYPSIDFSPVDWTMPNMDNKDS 109
T+V A P S P A E D+G I YPSID SP+D + N
Sbjct: 348 --------TNVTPPDAVP---SAPLA--ADEILDNGAIHYPSIDSSPIDLSSQTAHNAPL 394
Query: 108 RTSQAKEDGGASSSCVICLDAPVEGACVPCGHMAGC 1
+ + K D +SSSCVICLDAPV+GAC+PCGHMAGC
Sbjct: 395 QAGEGK-DEMSSSSCVICLDAPVQGACIPCGHMAGC 429
>emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]
Length = 500
Score = 403 bits (1036), Expect = e-110
Identities = 251/545 (46%), Positives = 305/545 (55%), Gaps = 29/545 (5%)
Frame = -2
Query: 1548 MGLQQSKEALLYQQVIDGNIEGIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 1369
MG QQSK+ LL+QQV+ GN+EGIKAL REGA LEW D+EGKT LIVAC +L++VAKTL
Sbjct: 1 MGQQQSKDELLHQQVVYGNVEGIKALSREGAGLEWTDREGKTPLIVACMFSELFNVAKTL 60
Query: 1368 IQLGANVNAYRPGGHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVEVARVKG 1189
I+LGANVNAYRPG HAGT LHHA KKGL++TV LLLSHGAN L +NDD +T ++VAR KG
Sbjct: 61 IELGANVNAYRPGRHAGTPLHHAAKKGLEETVNLLLSHGANALVMNDDCQTALDVARAKG 120
Query: 1188 HYNVVRTIESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSRNXXXXXXXXX 1009
H VVR IESHIC FSGWLRE YGPGF+EV AP +S+K+WVV+LPCGSR
Sbjct: 121 HSRVVRVIESHICLFSGWLREFYGPGFLEVLAPQWVSRKVWVVILPCGSRKPTKPFKL-- 178
Query: 1008 LELAMYNSLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKST---------------- 877
ELA+Y+SLQDA+PRTTIALWKA ++E KF P P V I D ST
Sbjct: 179 -ELAIYSSLQDAQPRTTIALWKANMDEAKFEDPDPAVIILDNSTISRGRRRRRCYTSREA 237
Query: 876 --------KKKFRLASSDEGERQQLQWLSNACRGIPQVMHPTLLTNAHTSVVPPTMPPPN 721
+ + +LA + + QQLQW NAC+G +P M PP
Sbjct: 238 RCKPRALRQTQIKLAPEKKSDSQQLQWFCNACKG-----------------IPQAMHPP- 279
Query: 720 GDDVELAMAGNASLLAAREEMPRIMDSHSSPEFSNAIGWGSSADISSHNGWLXXXXXXXX 541
A NA A P ++ + A+ +S + G
Sbjct: 280 ------AFLHNAQTPAVPPTAPP-----TAEDLELAMAINASIQSAMQEG---------- 318
Query: 540 XXXXXGWLVEPAEEAYNGWGTSETESSSNRTQQN----ISAPXXXXXXXXXXXXXXXXSA 373
L++ NG TS +S N T N + AP
Sbjct: 319 -----PPLLDSPSSFENGASTS-WNNSVNITNHNCPDALVAPVAPA-------------- 358
Query: 372 FSSKESCGGWLNNQSENVQNGWGMSETGSRSNQNNSTSVPLTHATPQTASVPSAPPVP-E 196
SSK S SE V + G S T S + T +P P AS SAPP+ E
Sbjct: 359 -SSKAS-------SSECVVHEAGPS-TNSTQHIQIETHIP---DIPVQASTASAPPIADE 406
Query: 195 GADDGPIQYPSIDFSPVDWTMPNMDNKDSRTSQAKEDGGASSSCVICLDAPVEGACVPCG 16
DDGP+QYPSID SPVD T P + + + Q+KE GGA+SSCVICLDAP+EGAC+PCG
Sbjct: 407 VVDDGPVQYPSIDSSPVDLTSPAFETSAAASEQSKE-GGAASSCVICLDAPIEGACIPCG 465
Query: 15 HMAGC 1
HMAGC
Sbjct: 466 HMAGC 470