BLASTX nr result

ID: Coptis23_contig00000989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000989
         (1123 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15806.3| unnamed protein product [Vitis vinifera]              422   e-116
ref|XP_002265847.1| PREDICTED: eukaryotic translation initiation...   422   e-116
ref|XP_004171578.1| PREDICTED: eukaryotic translation initiation...   397   e-108
ref|XP_002319977.1| predicted protein [Populus trichocarpa] gi|2...   397   e-108
gb|ABK96053.1| unknown [Populus trichocarpa]                          397   e-108

>emb|CBI15806.3| unnamed protein product [Vitis vinifera]
          Length = 290

 Score =  422 bits (1086), Expect = e-116
 Identities = 211/261 (80%), Positives = 226/261 (86%)
 Frame = -2

Query: 1122 IKDEASELASFDPTXXXXXXKVLIQDPADESVDKLTDKTESLSVSDGVENVFTGLKKKKK 943
            +KDE +ELA FDPT      KV+IQDPAD+SVDKL +KTESLSVS+GVEN F+G+KKKKK
Sbjct: 30   VKDEVAELAPFDPTKKKKKKKVVIQDPADDSVDKLAEKTESLSVSEGVENTFSGMKKKKK 89

Query: 942  KPVETDFMSDENGXXXXXXXXXXXXXXXXXGIVLQQRYPWEGSDRDYQYEELLGRVFNIL 763
            KPVETD ++D+ G                 GIVLQ RYPWEGSDRDY+YEELLGRVFNIL
Sbjct: 90   KPVETDILNDDGGDGKEDLDDHNGEDEEGEGIVLQPRYPWEGSDRDYKYEELLGRVFNIL 149

Query: 762  RENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPEHVMNFLLAEMGTSG 583
            RENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQP+HVM FLLAE+GTSG
Sbjct: 150  RENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSG 209

Query: 582  SLDGQQRLVVKGRFAPKNFEGILRRYINEYVICNGCKSPDTILSKENRLFFLRCEQCGSG 403
            SLDGQQRLVVKGRFAPKNFEGILRRYINEYVIC GCKSPDTILSKENRLFFLRCEQCGSG
Sbjct: 210  SLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEQCGSG 269

Query: 402  RSVAPIKAGFLARVGRRKAVT 340
            RSVAPIKAGF+ARVGRR   T
Sbjct: 270  RSVAPIKAGFVARVGRRNTGT 290


>ref|XP_002265847.1| PREDICTED: eukaryotic translation initiation factor 2 subunit beta
            [Vitis vinifera]
          Length = 269

 Score =  422 bits (1086), Expect = e-116
 Identities = 211/261 (80%), Positives = 226/261 (86%)
 Frame = -2

Query: 1122 IKDEASELASFDPTXXXXXXKVLIQDPADESVDKLTDKTESLSVSDGVENVFTGLKKKKK 943
            +KDE +ELA FDPT      KV+IQDPAD+SVDKL +KTESLSVS+GVEN F+G+KKKKK
Sbjct: 9    VKDEVAELAPFDPTKKKKKKKVVIQDPADDSVDKLAEKTESLSVSEGVENTFSGMKKKKK 68

Query: 942  KPVETDFMSDENGXXXXXXXXXXXXXXXXXGIVLQQRYPWEGSDRDYQYEELLGRVFNIL 763
            KPVETD ++D+ G                 GIVLQ RYPWEGSDRDY+YEELLGRVFNIL
Sbjct: 69   KPVETDILNDDGGDGKEDLDDHNGEDEEGEGIVLQPRYPWEGSDRDYKYEELLGRVFNIL 128

Query: 762  RENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPEHVMNFLLAEMGTSG 583
            RENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQP+HVM FLLAE+GTSG
Sbjct: 129  RENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSG 188

Query: 582  SLDGQQRLVVKGRFAPKNFEGILRRYINEYVICNGCKSPDTILSKENRLFFLRCEQCGSG 403
            SLDGQQRLVVKGRFAPKNFEGILRRYINEYVIC GCKSPDTILSKENRLFFLRCEQCGSG
Sbjct: 189  SLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEQCGSG 248

Query: 402  RSVAPIKAGFLARVGRRKAVT 340
            RSVAPIKAGF+ARVGRR   T
Sbjct: 249  RSVAPIKAGFVARVGRRNTGT 269


>ref|XP_004171578.1| PREDICTED: eukaryotic translation initiation factor 2 subunit
            beta-like [Cucumis sativus]
          Length = 270

 Score =  397 bits (1021), Expect = e-108
 Identities = 198/262 (75%), Positives = 220/262 (83%), Gaps = 1/262 (0%)
 Frame = -2

Query: 1122 IKDEASELASFDPTXXXXXXKVLIQDPADESVDKLTDKTESLSVSDGVENV-FTGLKKKK 946
            + D+ +++A FDPT      KV++QDP DESVDKL +KTESLSVSDG+E   F+GLKKKK
Sbjct: 9    VNDQVADIAPFDPTKKKKKKKVVLQDPTDESVDKLAEKTESLSVSDGLEAATFSGLKKKK 68

Query: 945  KKPVETDFMSDENGXXXXXXXXXXXXXXXXXGIVLQQRYPWEGSDRDYQYEELLGRVFNI 766
            KKPVE   ++++                   G+VLQ RYPWEG+DRDY+YEELLGRVFNI
Sbjct: 69   KKPVEASSLNEDGADATEDLEDQAGENEDREGLVLQYRYPWEGTDRDYEYEELLGRVFNI 128

Query: 765  LRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPEHVMNFLLAEMGTS 586
            LRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQP+HVM FLLAE+GTS
Sbjct: 129  LRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTS 188

Query: 585  GSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICNGCKSPDTILSKENRLFFLRCEQCGS 406
            GSLDGQQRLVVKGRFAPKNFEGILRRY+NEYVIC GCKSPDTILSKENRLFFLRCE+CGS
Sbjct: 189  GSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICIGCKSPDTILSKENRLFFLRCEKCGS 248

Query: 405  GRSVAPIKAGFLARVGRRKAVT 340
            GRSVAPIKAGF+ARVGRR   T
Sbjct: 249  GRSVAPIKAGFVARVGRRNTGT 270


>ref|XP_002319977.1| predicted protein [Populus trichocarpa] gi|222858353|gb|EEE95900.1|
            predicted protein [Populus trichocarpa]
          Length = 270

 Score =  397 bits (1019), Expect = e-108
 Identities = 201/263 (76%), Positives = 219/263 (83%), Gaps = 2/263 (0%)
 Frame = -2

Query: 1122 IKDEASELASFDPTXXXXXXKVLIQDPADESVDKLTDKTESLSVSDGVENVFTGLKKKKK 943
            +KDE +ELA FDPT      KV+IQ+ ADESVD L +KTESLSVSDG+E+ FTGLKKKKK
Sbjct: 8    LKDEVAELAPFDPTKKKKKKKVVIQENADESVDSLAEKTESLSVSDGLESSFTGLKKKKK 67

Query: 942  KPVETDFMSDENGXXXXXXXXXXXXXXXXXG--IVLQQRYPWEGSDRDYQYEELLGRVFN 769
            KPVET  + +E G                     + QQR+PW+G+DRDY YEELLGRVFN
Sbjct: 68   KPVETSLLDEETGDAGEEDLDVHAGEEENGEGADLQQQRFPWDGTDRDYDYEELLGRVFN 127

Query: 768  ILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPEHVMNFLLAEMGT 589
            ILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQ +HVM FLLAE+GT
Sbjct: 128  ILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQADHVMAFLLAELGT 187

Query: 588  SGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICNGCKSPDTILSKENRLFFLRCEQCG 409
            SGSLDGQQRLV+KGRFAPKNFEGILRRYINEYVIC GCKSPDTILSKENRLFFLRCE+CG
Sbjct: 188  SGSLDGQQRLVIKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCG 247

Query: 408  SGRSVAPIKAGFLARVGRRKAVT 340
            SGRSVAPIKAGF+ARVGRR A T
Sbjct: 248  SGRSVAPIKAGFVARVGRRNAGT 270


>gb|ABK96053.1| unknown [Populus trichocarpa]
          Length = 270

 Score =  397 bits (1019), Expect = e-108
 Identities = 201/263 (76%), Positives = 219/263 (83%), Gaps = 2/263 (0%)
 Frame = -2

Query: 1122 IKDEASELASFDPTXXXXXXKVLIQDPADESVDKLTDKTESLSVSDGVENVFTGLKKKKK 943
            +KDE +ELA FDPT      KV+IQ+ ADESVD L +KTESLSVSDG+E+ FTGLKKKKK
Sbjct: 8    LKDEVAELAPFDPTKKKKKEKVVIQENADESVDSLAEKTESLSVSDGLESSFTGLKKKKK 67

Query: 942  KPVETDFMSDENGXXXXXXXXXXXXXXXXXG--IVLQQRYPWEGSDRDYQYEELLGRVFN 769
            KPVET  + +E G                     + QQR+PW+G+DRDY YEELLGRVFN
Sbjct: 68   KPVETSLLDEETGDAGEEDLDVHAGEEENGEGADLQQQRFPWDGTDRDYDYEELLGRVFN 127

Query: 768  ILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPEHVMNFLLAEMGT 589
            ILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQ +HVM FLLAE+GT
Sbjct: 128  ILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQADHVMAFLLAELGT 187

Query: 588  SGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICNGCKSPDTILSKENRLFFLRCEQCG 409
            SGSLDGQQRLV+KGRFAPKNFEGILRRYINEYVIC GCKSPDTILSKENRLFFLRCE+CG
Sbjct: 188  SGSLDGQQRLVIKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCG 247

Query: 408  SGRSVAPIKAGFLARVGRRKAVT 340
            SGRSVAPIKAGF+ARVGRR A T
Sbjct: 248  SGRSVAPIKAGFVARVGRRNAGT 270


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