BLASTX nr result

ID: Coptis23_contig00000974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000974
         (1745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275899.1| PREDICTED: uncharacterized protein LOC100262...    95   5e-17
emb|CAN77162.1| hypothetical protein VITISV_029831 [Vitis vinifera]    95   5e-17
ref|XP_004147022.1| PREDICTED: uncharacterized protein LOC101214...    89   5e-15
gb|ADN34011.1| translation initiation factor [Cucumis melo subsp...    88   6e-15
ref|XP_002868857.1| hypothetical protein ARALYDRAFT_490636 [Arab...    78   8e-12

>ref|XP_002275899.1| PREDICTED: uncharacterized protein LOC100262348 [Vitis vinifera]
          Length = 401

 Score = 95.1 bits (235), Expect = 5e-17
 Identities = 74/224 (33%), Positives = 98/224 (43%), Gaps = 13/224 (5%)
 Frame = +3

Query: 342 ASVKGLTPDELSRLPTGPRERSAXXXXXXXXXXXXFKSYGSDRV--GGGSRYXXXXXXXX 515
           +  KGLT ++L  LPTGPR+RSA            F+SYGS+    GG SRY        
Sbjct: 89  SQTKGLTHEDLMMLPTGPRQRSAEELDRGRLGGG-FRSYGSNGSYEGGRSRYGGGEDSAN 147

Query: 516 XXXXXXXXXXXXXXXXXXXXX-PLPPSKADEVDDWGAMKKSMGGATXXXXXXXXXXXXXX 692
                                  L PS+ADE+DDWGA KKS  G                
Sbjct: 148 PRWGPRGSEERRQGGFGRDSSRELAPSRADEIDDWGAAKKSTVG--------------NG 193

Query: 693 XXXXXXXXXXXXXXXADEADNWLAKKSFTPSPVEPXXXXXXXXXFES------GYQRDIP 854
                          ADE+ +W++ KSFTPS             FES      G+     
Sbjct: 194 FERRDRGGFFDSQSRADESASWVSNKSFTPSE---GRRFGGGGGFESLRERRGGFDSASD 250

Query: 855 IGGGADGDSWGKKRGEEVSESVG----RPRLVLQPRSVPISNGE 974
            GGGAD +SWG+K+ E    + G    RP+L+LQPR+VP+++G+
Sbjct: 251 GGGGADSESWGRKKEEGSGNANGSAGSRPKLILQPRTVPVNDGQ 294



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 36/91 (39%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
 Frame = +2

Query: 1127 NPFGAARPREEVLGERGEDWKKIDEHL----XXXXXXXXXXXXXXPXXXXXXXXXXNGRM 1294
            NPFG ARPREEVL E+G+DWK+I+E L                  P          N R 
Sbjct: 308  NPFGEARPREEVLAEKGQDWKEIEEKLESVKLKDVGSPGVGQTDGPSFGKRSFGSGNARA 367

Query: 1295 SSPEDRTERSWRRTSSVESPTPSVENVEHAE 1387
            S PE R+E+SWR+  S +      E+ EH E
Sbjct: 368  SLPESRSEKSWRKPESEDVRAAKTED-EHEE 397


>emb|CAN77162.1| hypothetical protein VITISV_029831 [Vitis vinifera]
          Length = 1434

 Score = 95.1 bits (235), Expect = 5e-17
 Identities = 74/224 (33%), Positives = 98/224 (43%), Gaps = 13/224 (5%)
 Frame = +3

Query: 342 ASVKGLTPDELSRLPTGPRERSAXXXXXXXXXXXXFKSYGSDRV--GGGSRYXXXXXXXX 515
           +  KGLT ++L  LPTGPR+RSA            F+SYGS+    GG SRY        
Sbjct: 89  SQTKGLTHEDLMMLPTGPRQRSAEELDRGRLGGG-FRSYGSNGSYEGGRSRYGGGEDSAN 147

Query: 516 XXXXXXXXXXXXXXXXXXXXX-PLPPSKADEVDDWGAMKKSMGGATXXXXXXXXXXXXXX 692
                                  L PS+ADE+DDWGA KKS  G                
Sbjct: 148 PRWGPRGSEERRQGGFGRDSSRELAPSRADEIDDWGAAKKSTVG--------------NG 193

Query: 693 XXXXXXXXXXXXXXXADEADNWLAKKSFTPSPVEPXXXXXXXXXFES------GYQRDIP 854
                          ADE+ +W++ KSFTPS             FES      G+     
Sbjct: 194 FERRDRGGFFDSQSRADESASWVSNKSFTPSE---GRRFGGGGGFESLRERRGGFDSASD 250

Query: 855 IGGGADGDSWGKKRGEEVSESVG----RPRLVLQPRSVPISNGE 974
            GGGAD +SWG+K+ E    + G    RP+L+LQPR+VP+++G+
Sbjct: 251 GGGGADSESWGRKKEEGSGNANGSAGSRPKLILQPRTVPVNDGQ 294



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 32/76 (42%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
 Frame = +2

Query: 1127 NPFGAARPREEVLGERGEDWKKIDEHL----XXXXXXXXXXXXXXPXXXXXXXXXXNGRM 1294
            NPFG ARPREEVL E+G+DWK+I+E L                  P          N R 
Sbjct: 308  NPFGEARPREEVLAEKGQDWKEIEEKLESVKLKDVGSPGVGQTDGPSFGKRSFGSGNARA 367

Query: 1295 SSPEDRTERSWRRTSS 1342
            S PE R E+SWR+  S
Sbjct: 368  SLPESRXEKSWRKPES 383


>ref|XP_004147022.1| PREDICTED: uncharacterized protein LOC101214573 [Cucumis sativus]
           gi|449489695|ref|XP_004158389.1| PREDICTED:
           uncharacterized LOC101214573 [Cucumis sativus]
          Length = 405

 Score = 88.6 bits (218), Expect = 5e-15
 Identities = 93/333 (27%), Positives = 119/333 (35%), Gaps = 30/333 (9%)
 Frame = +3

Query: 63  MATSVSAWKKPAAVAAGTWALDXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSDFPXXXXX 242
           MA +VS W KP     G WALD                           P +DFP     
Sbjct: 1   MAATVSPWGKP-----GAWALDAEEHEAELLKDQEEQSRHQEE------PSADFPSLAAA 49

Query: 243 XXXXXXXXXXXXXXXAEFNNGKSVTHGSSNKGVASV--KGLTPDELSRLPTGPRERSAXX 416
                          +EF      T+G       S   KGLT ++L  LPTGPR+R+A  
Sbjct: 50  AATKPKKKKGQSIPLSEFQ-----TYGGPKPSAQSSDPKGLTAEDLMMLPTGPRQRTAEE 104

Query: 417 XXXXXXXXXXFKSYGSDRV-GGGSRYXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---PL 584
                     FKS+G + +   G+RY                                  
Sbjct: 105 MDRNRLGGG-FKSWGQNSLYDRGNRYSNSEDSPNSRRSSRVFDESRRTNDGSDREFRRES 163

Query: 585 PPSKADEVDDWGAMKKSMGGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADEADNWLA 764
            PS+ADE+DDWGA KK M G                               ADE+D+W++
Sbjct: 164 LPSRADEIDDWGAGKKPMVG----------NGFERRERGGGGGFFDSHSSKADESDSWVS 213

Query: 765 KKSFTPSPVEPXXXXXXXXXFESGYQRDIPI-GGGADGDSWGKK---------------- 893
            KSFTPS             F+   +   P  GGGAD D+WG+K                
Sbjct: 214 SKSFTPSE------GRRSGGFDRERRGGFPTSGGGADSDNWGRKPDGARGGIGENGGSAD 267

Query: 894 ------RGEEVSESVG-RPRLVLQPRSVPISNG 971
                 R E V   +G RPRL LQPRS+P++NG
Sbjct: 268 SENWGKRSEGVRSGIGERPRLNLQPRSIPLNNG 300



 Score = 61.6 bits (148), Expect = 6e-07
 Identities = 35/84 (41%), Positives = 40/84 (47%)
 Frame = +2

Query: 1127 NPFGAARPREEVLGERGEDWKKIDEHLXXXXXXXXXXXXXXPXXXXXXXXXXNGRMSSPE 1306
            NPFG ARPREEVL E+G+DWKKIDE L                          G  S   
Sbjct: 315  NPFGNARPREEVLAEKGQDWKKIDEQLESVKIKDTVERAETSSGASFERKKGFGARSGRS 374

Query: 1307 DRTERSWRRTSSVESPTPSVENVE 1378
              + R+WR+  SVES   S E VE
Sbjct: 375  PDSGRTWRKPESVESRPQSAELVE 398


>gb|ADN34011.1| translation initiation factor [Cucumis melo subsp. melo]
          Length = 405

 Score = 88.2 bits (217), Expect = 6e-15
 Identities = 92/332 (27%), Positives = 118/332 (35%), Gaps = 29/332 (8%)
 Frame = +3

Query: 63  MATSVSAWKKPAAVAAGTWALDXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSDFPXXXXX 242
           MA +VS W KP     G WALD                           P +DFP     
Sbjct: 1   MAATVSPWGKP-----GAWALDAEEHEAELLKDQQDQSRHQSE------PSADFPSLAAA 49

Query: 243 XXXXXXXXXXXXXXXAEFNNGKSVTHGSSNKGVASV--KGLTPDELSRLPTGPRERSAXX 416
                          +EF      T+G       S   KGLT ++L  LPTGPR+R+A  
Sbjct: 50  AATKPKKKKGQSIPLSEFQ-----TYGGPRPAAQSTDPKGLTAEDLMMLPTGPRQRTAEE 104

Query: 417 XXXXXXXXXXFKSYGSDRV-GGGSRYXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---PL 584
                     FKS+G + +   G+RY                                  
Sbjct: 105 MDRNRLGGG-FKSWGQNSLYDRGNRYSNSEDSPNSRRSSRVFDESRRSNDGSDREFRRES 163

Query: 585 PPSKADEVDDWGAMKKSMGGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADEADNWLA 764
            PS+ADE+DDWGA KK M G                               ADE+D+W++
Sbjct: 164 LPSRADEIDDWGAGKKPMMG----------NGFERRERGGGGGFFDSHSSKADESDSWVS 213

Query: 765 KKSFTPSPVEPXXXXXXXXXFESGYQRDIPIGGGADGDSWGK------------------ 890
            KSFTPS  E             G+      GGGAD D+WG+                  
Sbjct: 214 SKSFTPS--EGRRSGGFDRERRGGFPTS---GGGADSDNWGRKSDGARAGMGENGGGADS 268

Query: 891 ----KRGEEVSESVG-RPRLVLQPRSVPISNG 971
               K+ E V   +G RPRL LQPRS+P++NG
Sbjct: 269 DNWGKKSEGVRSGIGERPRLNLQPRSIPLNNG 300



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 34/84 (40%), Positives = 39/84 (46%)
 Frame = +2

Query: 1127 NPFGAARPREEVLGERGEDWKKIDEHLXXXXXXXXXXXXXXPXXXXXXXXXXNGRMSSPE 1306
            NPFG ARPREEVL E+G+DWKKIDE L                          G  S   
Sbjct: 315  NPFGNARPREEVLAEKGQDWKKIDEQLGSMKIKDTVERAETSSGASFERRKGFGVRSGRS 374

Query: 1307 DRTERSWRRTSSVESPTPSVENVE 1378
              + RSWR+  S +S   S E VE
Sbjct: 375  PDSGRSWRKPESADSRPQSAELVE 398


>ref|XP_002868857.1| hypothetical protein ARALYDRAFT_490636 [Arabidopsis lyrata subsp.
           lyrata] gi|297314693|gb|EFH45116.1| hypothetical protein
           ARALYDRAFT_490636 [Arabidopsis lyrata subsp. lyrata]
          Length = 419

 Score = 77.8 bits (190), Expect = 8e-12
 Identities = 78/260 (30%), Positives = 97/260 (37%), Gaps = 10/260 (3%)
 Frame = +3

Query: 216 SDFPXXXXXXXXXXXXXXXXXXXXAEFNNGKSVTHGSSNKGVASVKGLTPDELSRLPTGP 395
           SDFP                    AEF      T+GS+ K  A  + LT  EL  LPTGP
Sbjct: 43  SDFPSLAAAATTKTKKKKAQTISLAEF-----ATYGSA-KAAAQTERLTQAELVSLPTGP 96

Query: 396 RERSAXXXXXXXXXXXXFKSYGSDRVGGGSRYXXXXXXXXXXXXXXXXXXXXXXXXXXXX 575
           RERSA            F+SYG  R G  S                              
Sbjct: 97  RERSADELDRSKLGGG-FRSYGGGRYGDESSSSRWGSSRVSEDGERRGGGFNRDREPSRD 155

Query: 576 XPLPPSKADEVDDWGAMKKSMGGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADEADN 755
               PS+ADE D+W A KK +GG                               ADE D+
Sbjct: 156 SG--PSRADEDDNWAAAKKPIGG-----------NGFERRERGAGGGFFESQSKADEVDS 202

Query: 756 WLAKKSFTPSPVEPXXXXXXXXXFESGYQRDIPIGGG--ADGDSWGKKRGEEVSESVG-- 923
           W++ K     P EP               RD   GGG  +D D+WG++R EE S + G  
Sbjct: 203 WVSSK-----PSEPRRYEKRGSFESLSRNRDSQYGGGGSSDSDTWGRRR-EESSGANGVP 256

Query: 924 ------RPRLVLQPRSVPIS 965
                 RPRLVLQPR++P++
Sbjct: 257 SPTAGSRPRLVLQPRTLPVA 276



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 36/91 (39%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
 Frame = +2

Query: 1127 NPFGAARPREEVLGERGEDWKKIDEHLXXXXXXXXXXXXXXP----XXXXXXXXXXNGRM 1294
            NPFG ARPREEVL E+G+DWK+IDE L              P              NGR 
Sbjct: 298  NPFGNARPREEVLAEKGQDWKEIDEKLEADKLKDVAAAIEKPDEKSPGKMGGFGLGNGR- 356

Query: 1295 SSPEDRTERSWRRTSSVESPTPSVENVEHAE 1387
               ++RTERSWR+++      P+VE  +  E
Sbjct: 357  -KDDERTERSWRKSTEQSEEEPAVEEAKKEE 386


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