BLASTX nr result

ID: Coptis23_contig00000929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000929
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263305.2| PREDICTED: ethylene-responsive transcription...   140   1e-31
ref|XP_003635449.1| PREDICTED: ethylene-responsive transcription...   140   1e-31
gb|ADC94856.1| DRE transcription factor 1 [Vitis pseudoreticulata]    137   1e-30
ref|XP_002285802.1| PREDICTED: ethylene-responsive transcription...   135   3e-30
ref|XP_002307098.1| AP2/ERF domain-containing transcription fact...   125   5e-27

>ref|XP_002263305.2| PREDICTED: ethylene-responsive transcription factor RAP2-4-like,
           partial [Vitis vinifera]
          Length = 290

 Score =  140 bits (353), Expect = 1e-31
 Identities = 77/138 (55%), Positives = 86/138 (62%), Gaps = 6/138 (4%)
 Frame = +1

Query: 1   PNL--DYCSTSTTPMFSQGFSTYNDQLGLEQTGSIGLNHLTPSXXXXXXXXXXXXXXXXX 174
           PN+  D+CSTSTT +FSQGFS Y DQ+GLEQTGSIGLNH+TP+                 
Sbjct: 72  PNMYPDFCSTSTTHVFSQGFSGY-DQMGLEQTGSIGLNHITPAQILQIQAQIQFQQQQQQ 130

Query: 175 XRDALAAAASFHXXXXXXXXXXXXXXX----FLSPKAIPMKQVGISSKPTKLYRGVRQRH 342
              A+A A+S                     FL PKAIPMKQVG   KP KLYRGVRQRH
Sbjct: 131 RMAAVATASSIQNQRLSQWQQQQQQQQHTLNFLGPKAIPMKQVGTPPKPAKLYRGVRQRH 190

Query: 343 WGKWVAEIRLPRNRTRLW 396
           WGKWVAEIRLP+NRTRLW
Sbjct: 191 WGKWVAEIRLPKNRTRLW 208


>ref|XP_003635449.1| PREDICTED: ethylene-responsive transcription factor RAP2-4-like
           [Vitis vinifera]
          Length = 374

 Score =  140 bits (353), Expect = 1e-31
 Identities = 77/134 (57%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
 Frame = +1

Query: 1   PNL--DYCSTSTTPMFSQGFSTYNDQLGLEQTGSIGLNHLTPSXXXXXXXXXXXXXXXXX 174
           PN+  D+CSTSTT MFSQGFS Y DQ+GLEQT SIGLNH+TP+                 
Sbjct: 72  PNMYPDFCSTSTTHMFSQGFSGY-DQMGLEQTRSIGLNHITPAQILQIQAQIQFQQQQQQ 130

Query: 175 XRDALAAAASFHXXXXXXXXXXXXXXXFLSPKAIPMKQVGISSKPTKLYRGVRQRHWGKW 354
              A+A A+S                 FL PKAIPMKQVG   KP KLYRGVRQRHWGKW
Sbjct: 131 RMAAVATASSIQNQRLSQWQQQHNLN-FLGPKAIPMKQVGTPPKPAKLYRGVRQRHWGKW 189

Query: 355 VAEIRLPRNRTRLW 396
           VAEIRLP+NRTRLW
Sbjct: 190 VAEIRLPKNRTRLW 203


>gb|ADC94856.1| DRE transcription factor 1 [Vitis pseudoreticulata]
          Length = 379

 Score =  137 bits (344), Expect = 1e-30
 Identities = 76/138 (55%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
 Frame = +1

Query: 1   PNL--DYCSTSTTPMFSQGFSTYNDQLGLEQTGSIGLNHLTPSXXXXXXXXXXXXXXXXX 174
           PN+   +CSTSTT MFSQGF  Y DQ+GLEQTGSIGLNH+TP+                 
Sbjct: 72  PNMYPGFCSTSTTHMFSQGFLGY-DQMGLEQTGSIGLNHITPAQILQIQAQIQFQQQQQQ 130

Query: 175 XRDALAAAASFHXXXXXXXXXXXXXXX----FLSPKAIPMKQVGISSKPTKLYRGVRQRH 342
              A+A A+S                     FL PKAIPMKQVG   KP KLYRGVRQRH
Sbjct: 131 RMAAVATASSIQNQRLSQWQQQQQQQQHTLNFLGPKAIPMKQVGTPPKPAKLYRGVRQRH 190

Query: 343 WGKWVAEIRLPRNRTRLW 396
           WGKWVAEIRLP+NRTRLW
Sbjct: 191 WGKWVAEIRLPKNRTRLW 208


>ref|XP_002285802.1| PREDICTED: ethylene-responsive transcription factor RAP2-4-like
           isoform 1 [Vitis vinifera]
          Length = 367

 Score =  135 bits (340), Expect = 3e-30
 Identities = 74/129 (57%), Positives = 83/129 (64%)
 Frame = +1

Query: 10  DYCSTSTTPMFSQGFSTYNDQLGLEQTGSIGLNHLTPSXXXXXXXXXXXXXXXXXXRDAL 189
           D CSTSTT + SQGFS+++ Q G E +G IGLNHLTPS                    A+
Sbjct: 69  DGCSTSTTHVISQGFSSHDLQ-GFEHSGPIGLNHLTPSQIHQIQAQIQLQQHHNHM-PAV 126

Query: 190 AAAASFHXXXXXXXXXXXXXXXFLSPKAIPMKQVGISSKPTKLYRGVRQRHWGKWVAEIR 369
           AAAASF+               FLSPK IPMKQVG+  KPTKLYRGVRQRHWGKWVAEIR
Sbjct: 127 AAAASFNTQNLPQWQQRQQAPNFLSPKPIPMKQVGVPPKPTKLYRGVRQRHWGKWVAEIR 186

Query: 370 LPRNRTRLW 396
           LP+NRTRLW
Sbjct: 187 LPKNRTRLW 195


>ref|XP_002307098.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222856547|gb|EEE94094.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 372

 Score =  125 bits (313), Expect = 5e-27
 Identities = 71/135 (52%), Positives = 79/135 (58%), Gaps = 3/135 (2%)
 Frame = +1

Query: 1   PNLD--YCSTSTTPMFSQGFSTYNDQLGLEQTGSIGLNHLTPSXXXXXXXXXXXXXXXXX 174
           PNLD  +CS ++T MFS GF  YN Q+G EQTG IGLNHLTPS                 
Sbjct: 72  PNLDLSFCSPTSTQMFSNGFLDYN-QMGFEQTGPIGLNHLTPSQILQIQAKIHFQQQQQQ 130

Query: 175 XRDALAAAASFHXXXXXXXXXXXXXXXFLSPKAIPMKQVGIS-SKPTKLYRGVRQRHWGK 351
             + LA   S                 FL+PK +PMKQ   S  KPTKLYRGVRQRHWGK
Sbjct: 131 KMENLATTTS-------QFVHNQRASNFLAPKPVPMKQSAASPQKPTKLYRGVRQRHWGK 183

Query: 352 WVAEIRLPRNRTRLW 396
           WVAEIRLP+NRTRLW
Sbjct: 184 WVAEIRLPKNRTRLW 198


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