BLASTX nr result

ID: Coptis23_contig00000925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000925
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523343.1| conserved hypothetical protein [Ricinus comm...    78   4e-12
ref|XP_002320866.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-11
ref|XP_002263610.1| PREDICTED: uncharacterized protein LOC100245...    69   1e-09
emb|CAN82990.1| hypothetical protein VITISV_009585 [Vitis vinifera]    69   1e-09
ref|XP_003548415.1| PREDICTED: uncharacterized protein LOC100796...    58   3e-06

>ref|XP_002523343.1| conserved hypothetical protein [Ricinus communis]
           gi|223537431|gb|EEF39059.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1130

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 55/185 (29%), Positives = 101/185 (54%), Gaps = 23/185 (12%)
 Frame = +1

Query: 97  SGSVEVLPVVVNRVMESTVRPQLDKQELMNSFSKAKTPGEELMLPHSSSCVDHETRRFSK 276
           +G VEV+       M  T +P++DKQELM +  +AK   ++L+L  SS      +  F++
Sbjct: 311 NGEVEVVQETSELSMPPTEKPKMDKQELMRNILEAKAKKDKLLLVGSSGSQTTHSMDFNE 370

Query: 277 KLQEIKEMAKQAREIE-------RKSREEHEIVDEDVSTDLE-----DSKIHSHVSDLSD 420
           K+Q+I+ MA++AREIE          REE + V+E++S+ +E       ++ S VS  + 
Sbjct: 371 KIQKIRAMAREAREIEFGEQPVVNNDREEKQPVNEELSSQMEMVEKHTGEVASFVSKSAS 430

Query: 421 GDSVKSMDVNATRERPSVE----------YSPTIENGSIPGRTSIKASENNNFQV-PDLA 567
           G+S ++ DVN T+ + S++          +  + + G +     +++SEN+  +V  D+ 
Sbjct: 431 GESGQNRDVNDTQGQISLDGIKGDNVGCLHEVSFDKGKV-----MQSSENSRLEVSKDMQ 485

Query: 568 SSAEG 582
           ++A G
Sbjct: 486 TTASG 490


>ref|XP_002320866.1| predicted protein [Populus trichocarpa] gi|222861639|gb|EEE99181.1|
            predicted protein [Populus trichocarpa]
          Length = 1146

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 25/230 (10%)
 Frame = +1

Query: 100  GSVEVLPVVVNRVMESTVRPQLDKQELMNSFSKAKTPGE-ELMLPHSSSCVDHETRRFSK 276
            G V V+   +   M  T RP+LDKQELM +  KAK   + EL+L  SS+        F +
Sbjct: 322  GRVGVVQESLEPPMVLTERPKLDKQELMKNIFKAKAASKNELLLVDSSNSQTTNAMDFDR 381

Query: 277  KLQEIKEMAKQAREIE----RKSREEHEIVDEDVSTDL----EDSKIHSHVSDLSDGDSV 432
            ++Q I+EMAKQ RE E     K  EE + V+E+  +++    E  ++ S  S+  + DSV
Sbjct: 382  EIQTIREMAKQVRESETRELNKGMEEKQPVNEEPFSEMQIVEEHKEVASFPSETHNKDSV 441

Query: 433  KSMDVNATRERPSVEYSPTIENGSIP-------------GRTSIKASENNNFQV-PDLAS 570
               DV+    +  +  + + + G  P             G +SI  S++    V  D+  
Sbjct: 442  DRRDVDVIIVKKKLNETESDDTGYHPKLSAEENKVMQESGTSSINFSDDRETMVRGDVIH 501

Query: 571  SAEGSGNGVQSQQDGIRSEPSSLRSIVTEEENQSSENL--TIEPQSVDVQ 714
            S    G+  +S    IR +P  +RS+    E  + + +    EPQ + VQ
Sbjct: 502  SFVPDGDSCKSNNRSIRPKPRVIRSVKEAREFLAKKGVKHIQEPQFIAVQ 551


>ref|XP_002263610.1| PREDICTED: uncharacterized protein LOC100245070 [Vitis vinifera]
          Length = 1149

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 82/314 (26%), Positives = 129/314 (41%), Gaps = 12/314 (3%)
 Frame = +1

Query: 103  SVEVLPVVVNRVMESTVRPQLDKQELMNSFSKAKTPGEELMLPHSSSCVDHETRRFSKKL 282
            SVEV+       M ST RP+LD+QELM+S  + K               D  ++ F  K+
Sbjct: 311  SVEVVQPSPELPMVSTERPKLDQQELMSSILRMKD--------------DLASKDFDGKI 356

Query: 283  QEIKEMAKQAREIERK-------SREEHEIVDEDVSTDLEDSKIH-----SHVSDLSDGD 426
            QEI+EMA++AREIE +         EE++IV E++S + E  K H     S +++LS G 
Sbjct: 357  QEIREMARRAREIEGQDPSLVDGDGEENQIVIEELSDEAEVIKQHTEEDASFLNNLSKGA 416

Query: 427  SVKSMDVNATRERPSVEYSPTIENGSIPGRTSIKASENNNFQVPDLASSAEGSGNGVQSQ 606
             +++M +N T                      +K S     +  DL  S+E S      Q
Sbjct: 417  PMQAMGINGT----------------------VKPSSLGEKERDDLGLSSEPSPKNKDLQ 454

Query: 607  QDGIRSEPSSLRSIVTEEENQSSENLTIEPQSVDVQPLLEGTFLHPLENSKSKNPAPAST 786
                 S P   +S  T ++ + SEN +    S+D    ++ T  H  + S  K       
Sbjct: 455  TLTALSGPYDRQS--TTQDLEDSENTS---DSLDAIEAIQSTDSHYGQTSMPKK------ 503

Query: 787  VEGSENGMNTQWDLNNRESSTLQSMGRSQEIPSTDLLDDETYGSNKQPIKVKPKIMLTVK 966
                                     G + +IP                     +++++VK
Sbjct: 504  -------------------------GSTSKIP---------------------RVIMSVK 517

Query: 967  EAREYLSQKRDRGE 1008
            EAR+YLS+K+D+ E
Sbjct: 518  EARDYLSKKQDKQE 531


>emb|CAN82990.1| hypothetical protein VITISV_009585 [Vitis vinifera]
          Length = 1243

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 82/314 (26%), Positives = 129/314 (41%), Gaps = 12/314 (3%)
 Frame = +1

Query: 103  SVEVLPVVVNRVMESTVRPQLDKQELMNSFSKAKTPGEELMLPHSSSCVDHETRRFSKKL 282
            SVEV+       M ST RP+LD+QELM+S  + K               D  ++ F  K+
Sbjct: 403  SVEVVQPSPELPMVSTERPKLDQQELMSSILRMKD--------------DLASKDFDGKI 448

Query: 283  QEIKEMAKQAREIERK-------SREEHEIVDEDVSTDLEDSKIH-----SHVSDLSDGD 426
            QEI+EMA++AREIE +         EE++IV E++S + E  K H     S +++LS G 
Sbjct: 449  QEIREMARRAREIEGQDPSLVDGDGEENQIVIEELSDEAEVIKQHTEEDASFLNNLSKGA 508

Query: 427  SVKSMDVNATRERPSVEYSPTIENGSIPGRTSIKASENNNFQVPDLASSAEGSGNGVQSQ 606
             +++M +N T                      +K S     +  DL  S+E S      Q
Sbjct: 509  PMQAMGINGT----------------------VKPSSLGEKERDDLGLSSEPSPKNKDLQ 546

Query: 607  QDGIRSEPSSLRSIVTEEENQSSENLTIEPQSVDVQPLLEGTFLHPLENSKSKNPAPAST 786
                 S P   +S  T ++ + SEN +    S+D    ++ T  H  + S  K       
Sbjct: 547  TLTALSGPYDRQS--TTQDLEDSENTS---DSLDAIEAIQSTDSHYGQTSMPKK------ 595

Query: 787  VEGSENGMNTQWDLNNRESSTLQSMGRSQEIPSTDLLDDETYGSNKQPIKVKPKIMLTVK 966
                                     G + +IP                     +++++VK
Sbjct: 596  -------------------------GSTSKIP---------------------RVIMSVK 609

Query: 967  EAREYLSQKRDRGE 1008
            EAR+YLS+K+D+ E
Sbjct: 610  EARDYLSKKQDKQE 623


>ref|XP_003548415.1| PREDICTED: uncharacterized protein LOC100796285 [Glycine max]
          Length = 1308

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 4/119 (3%)
 Frame = +1

Query: 154 RPQLDKQELMNSFSKAKTPGEELMLPHSSSCVDHETRRFSKKLQEIKEMAKQAREIERKS 333
           +P+LDK++L NS  K     ++L++  SS  V   +     K+QEI+EMA+QAR+IE  +
Sbjct: 326 KPKLDKEQLRNSILKVTGSADKLVVHDSSDKVKTRSTEMDYKVQEIREMARQARKIEGSN 385

Query: 334 ----REEHEIVDEDVSTDLEDSKIHSHVSDLSDGDSVKSMDVNATRERPSVEYSPTIEN 498
                 + E  D  +    +DS+ +  +S+  +  S ++ D N   +  SV+   +I+N
Sbjct: 386 GVVGNRDMETDDPVIEISSDDSEQYDGLSNHQNEVSKETTDSNTIMQSVSVDVPESIDN 444


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