BLASTX nr result

ID: Coptis23_contig00000924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000924
         (1189 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30629.3| unnamed protein product [Vitis vinifera]              384   e-104
ref|XP_002273268.1| PREDICTED: uncharacterized protein LOC100243...   384   e-104
ref|XP_002305772.1| predicted protein [Populus trichocarpa] gi|2...   381   e-103
emb|CBI21934.3| unnamed protein product [Vitis vinifera]              380   e-103
emb|CAN71043.1| hypothetical protein VITISV_019063 [Vitis vinifera]   380   e-103

>emb|CBI30629.3| unnamed protein product [Vitis vinifera]
          Length = 484

 Score =  384 bits (986), Expect = e-104
 Identities = 204/383 (53%), Positives = 244/383 (63%), Gaps = 10/383 (2%)
 Frame = -2

Query: 1188 ATSGLAQCIDLKPVPEPNYHSILVGDEFNLHEGCFSNQTMGEHGYQEFDDYINLP----- 1024
            ATS LA     KP P+   H I     F        N+   EHG+Q  D     P     
Sbjct: 99   ATSALADGAVPKPEPDAQGHQIGASVLFQERY----NKGPQEHGFQLVDQCKISPSGAHN 154

Query: 1023 -WVNNSEATNQLAFDQFDVHQNFQNNNCTGLVGSGKFEEDSMHYASALQQSICHPSSSMM 847
              V+N E   QL + QFD+ Q+F+ N   G  G+G   ED+M + S+   SIC P S+ +
Sbjct: 155  MGVHNLEGATQLDYRQFDLQQDFEQNFFAGYDGTGLCGEDAMPHISSFLPSICLPPSAFL 214

Query: 846  KPKCALWDCCVPAQ----YQDYCCDIHASSAFNEGQSGMTPVVRHRGISLQDDPLFATLH 679
             PKCALWDC  PAQ     Q+YC   HA+ A +EG  GMTPV+R  GI L+D  LFA L 
Sbjct: 215  GPKCALWDCPRPAQGMDWCQNYCSSFHATLALSEGPPGMTPVLRPGGIGLKDGLLFAALS 274

Query: 678  AKMEGKDVGIPECEGAATMKCPWNSPELFDISFFEGETIREWLYFDKPRKAFKCGNRKQK 499
            AK++GKDVGIPECEGAAT K PWN+PELFD+S  EGETIREWL+FDKPR+AF+ GNRKQ+
Sbjct: 275  AKVQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQR 334

Query: 498  KLPDYSGRGWHESRGQMMKEYGGVKKSYYMDPQPLERFAWHLYEYVMDNCDALILCRLTL 319
             LPDYSGRGWHESR Q+M EYGG+K+SYYMDPQPL  F WHLYEY +  CDA  L RL L
Sbjct: 335  SLPDYSGRGWHESRKQVMNEYGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLEL 394

Query: 318  KFVDEKKSPKGKVIKNSIAELQKQMGRLVAESPTDNELSVKHETEDNLKDDSETVYSTQE 139
            K VD KKS K K   +S+A+LQKQMGRL AE P DN+ SVK  T+ N+KD    VYST  
Sbjct: 395  KLVDGKKSSKAKATTDSVADLQKQMGRLTAEFPLDNKRSVKGRTKINMKDGVGDVYSTPN 454

Query: 138  QMAPSNDGRY*RASAAYGYKVQN 70
            ++ P N          Y Y V+N
Sbjct: 455  RVGPPNQQGDYGVGGPYDYLVEN 477


>ref|XP_002273268.1| PREDICTED: uncharacterized protein LOC100243518 [Vitis vinifera]
          Length = 485

 Score =  384 bits (986), Expect = e-104
 Identities = 204/383 (53%), Positives = 244/383 (63%), Gaps = 10/383 (2%)
 Frame = -2

Query: 1188 ATSGLAQCIDLKPVPEPNYHSILVGDEFNLHEGCFSNQTMGEHGYQEFDDYINLP----- 1024
            ATS LA     KP P+   H I     F        N+   EHG+Q  D     P     
Sbjct: 100  ATSALADGAVPKPEPDAQGHQIGASVLFQERY----NKGPQEHGFQLVDQCKISPSGAHN 155

Query: 1023 -WVNNSEATNQLAFDQFDVHQNFQNNNCTGLVGSGKFEEDSMHYASALQQSICHPSSSMM 847
              V+N E   QL + QFD+ Q+F+ N   G  G+G   ED+M + S+   SIC P S+ +
Sbjct: 156  MGVHNLEGATQLDYRQFDLQQDFEQNFFAGYDGTGLCGEDAMPHISSFLPSICLPPSAFL 215

Query: 846  KPKCALWDCCVPAQ----YQDYCCDIHASSAFNEGQSGMTPVVRHRGISLQDDPLFATLH 679
             PKCALWDC  PAQ     Q+YC   HA+ A +EG  GMTPV+R  GI L+D  LFA L 
Sbjct: 216  GPKCALWDCPRPAQGMDWCQNYCSSFHATLALSEGPPGMTPVLRPGGIGLKDGLLFAALS 275

Query: 678  AKMEGKDVGIPECEGAATMKCPWNSPELFDISFFEGETIREWLYFDKPRKAFKCGNRKQK 499
            AK++GKDVGIPECEGAAT K PWN+PELFD+S  EGETIREWL+FDKPR+AF+ GNRKQ+
Sbjct: 276  AKVQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQR 335

Query: 498  KLPDYSGRGWHESRGQMMKEYGGVKKSYYMDPQPLERFAWHLYEYVMDNCDALILCRLTL 319
             LPDYSGRGWHESR Q+M EYGG+K+SYYMDPQPL  F WHLYEY +  CDA  L RL L
Sbjct: 336  SLPDYSGRGWHESRKQVMNEYGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLEL 395

Query: 318  KFVDEKKSPKGKVIKNSIAELQKQMGRLVAESPTDNELSVKHETEDNLKDDSETVYSTQE 139
            K VD KKS K K   +S+A+LQKQMGRL AE P DN+ SVK  T+ N+KD    VYST  
Sbjct: 396  KLVDGKKSSKAKATTDSVADLQKQMGRLTAEFPLDNKRSVKGRTKINMKDGVGDVYSTPN 455

Query: 138  QMAPSNDGRY*RASAAYGYKVQN 70
            ++ P N          Y Y V+N
Sbjct: 456  RVGPPNQQGDYGVGGPYDYLVEN 478


>ref|XP_002305772.1| predicted protein [Populus trichocarpa] gi|222848736|gb|EEE86283.1|
            predicted protein [Populus trichocarpa]
          Length = 491

 Score =  381 bits (978), Expect = e-103
 Identities = 198/368 (53%), Positives = 239/368 (64%), Gaps = 11/368 (2%)
 Frame = -2

Query: 1188 ATSGLAQCIDLKPVPEPNYHSILVGDEFNLHEGCFSNQTMGEHGYQEFDDYINLPW---- 1021
            ATS LA      P  EPN  S+  GD     E    N    EH +   D   + P     
Sbjct: 100  ATSALAA-----PKLEPNDQSMQGGDNVVFQEEYAVNHGQQEHAFPFVDQCKDSPSGVRS 154

Query: 1020 --VNNSEATNQLAFDQFDVHQNFQNNNCTGLVGSGKFEEDSMHYASALQQSICHPSSSMM 847
              +NN E   QL + QFD+ Q+F+ N  T   G+   EED MH+ S+   S+C P S+ +
Sbjct: 155  LAINNIEGAAQLDYHQFDLPQSFEQNFYTSFNGTDLGEEDGMHHVSSYLPSMCPPPSAFL 214

Query: 846  KPKCALWDCCVPAQ-----YQDYCCDIHASSAFNEGQSGMTPVVRHRGISLQDDPLFATL 682
             PKCALWDC  PAQ      QDYC   H S A NEG  GM+PV+R  GI L+D  LFA L
Sbjct: 215  GPKCALWDCPRPAQGGLEWCQDYCSSFHHSLALNEGPPGMSPVLRPGGIGLKDGLLFAAL 274

Query: 681  HAKMEGKDVGIPECEGAATMKCPWNSPELFDISFFEGETIREWLYFDKPRKAFKCGNRKQ 502
             AK EGKDVGIPECEGAAT K PWN+PELFD+S  EGET+REWL+FDKPR+AF+ GNRKQ
Sbjct: 275  SAKAEGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETLREWLFFDKPRRAFESGNRKQ 334

Query: 501  KKLPDYSGRGWHESRGQMMKEYGGVKKSYYMDPQPLERFAWHLYEYVMDNCDALILCRLT 322
            + LPDY+GRGWHESR Q+M E+GG+K+SYYMDPQPL  F WHLYEY ++ CDA  L RL 
Sbjct: 335  RSLPDYTGRGWHESRKQVMNEFGGLKRSYYMDPQPLNNFEWHLYEYEINKCDACALYRLE 394

Query: 321  LKFVDEKKSPKGKVIKNSIAELQKQMGRLVAESPTDNELSVKHETEDNLKDDSETVYSTQ 142
            LK VD KK+ KGK+   S+A+LQKQMGRL AE P DN+ +VK  T+ N K     VYS  
Sbjct: 395  LKAVDGKKTAKGKIANESVADLQKQMGRLTAEFPPDNKRAVKGRTKVNAKVGVGNVYSGS 454

Query: 141  EQMAPSND 118
             Q+AP+N+
Sbjct: 455  TQVAPTNE 462


>emb|CBI21934.3| unnamed protein product [Vitis vinifera]
          Length = 480

 Score =  380 bits (976), Expect = e-103
 Identities = 201/383 (52%), Positives = 245/383 (63%), Gaps = 10/383 (2%)
 Frame = -2

Query: 1188 ATSGLAQCIDLKPVPEPNYHSILVGDEFNLHEGCFSNQTMGEHGYQEFDDYINLPW---- 1021
            ATS L +   LKP  EP+  S+  G+     E    N    +H    FD      +    
Sbjct: 69   ATSALVEPAALKP--EPDVQSLQAGNSMAFQEDYLVNHASQDHCLLGFDQCKGSAFGLQN 126

Query: 1020 --VNNSEATNQLAFDQFDVHQNFQNNNCTGLVGSGKFEEDSMHYASALQQSICHPSSSMM 847
               NN E T Q  ++QFD+HQ+F +    G +G     +D +     L  +IC P S+ +
Sbjct: 127  TVANNLEMTTQSDYNQFDMHQDFDHELFIGPMGL--CGQDGVPNIPGLLPNICPPPSAFL 184

Query: 846  KPKCALWDCCVPAQ----YQDYCCDIHASSAFNEGQSGMTPVVRHRGISLQDDPLFATLH 679
             PKCALWDC  PAQ     QDYC   HAS A NEG  GMTPV+R  GI L+D PLFA L 
Sbjct: 185  GPKCALWDCPRPAQGSEWCQDYCSSFHASLALNEGPPGMTPVLRPGGIGLKDGPLFAALS 244

Query: 678  AKMEGKDVGIPECEGAATMKCPWNSPELFDISFFEGETIREWLYFDKPRKAFKCGNRKQK 499
            AK +GKDVGIPECEGAAT K PWN+PELFD+S  EGE IREWL+FDKPR+AF+ GNRKQ+
Sbjct: 245  AKTQGKDVGIPECEGAATSKSPWNAPELFDLSVLEGEIIREWLFFDKPRRAFESGNRKQR 304

Query: 498  KLPDYSGRGWHESRGQMMKEYGGVKKSYYMDPQPLERFAWHLYEYVMDNCDALILCRLTL 319
             LPDYSGRGWHESR Q+MKE+GG+K+SYYMDPQPL  F WHLYEY +++CDA  L RL L
Sbjct: 305  SLPDYSGRGWHESRKQVMKEFGGLKRSYYMDPQPLTCFEWHLYEYEINHCDACALYRLEL 364

Query: 318  KFVDEKKSPKGKVIKNSIAELQKQMGRLVAESPTDNELSVKHETEDNLKDDSETVYSTQE 139
            K VD KKSPKGKVI +S+A+LQKQMGRL AE PTD + S K  T+ N K  +  +YS   
Sbjct: 365  KLVDGKKSPKGKVINDSLADLQKQMGRLTAEFPTDVKRSTKGRTKVNKKVGARNIYSAPN 424

Query: 138  QMAPSNDGRY*RASAAYGYKVQN 70
             M P+ +      S +Y Y  +N
Sbjct: 425  LMTPTAETFSYGLSGSYNYLPEN 447


>emb|CAN71043.1| hypothetical protein VITISV_019063 [Vitis vinifera]
          Length = 503

 Score =  380 bits (976), Expect = e-103
 Identities = 201/383 (52%), Positives = 245/383 (63%), Gaps = 10/383 (2%)
 Frame = -2

Query: 1188 ATSGLAQCIDLKPVPEPNYHSILVGDEFNLHEGCFSNQTMGEHGYQEFDDYINLPW---- 1021
            ATS L +   LKP  EP+  S+  G+     E    N    +H    FD      +    
Sbjct: 118  ATSALVEPAALKP--EPDVQSLQAGNSMAFQEDYLVNHASQDHCLLGFDQCKGSAFGLQN 175

Query: 1020 --VNNSEATNQLAFDQFDVHQNFQNNNCTGLVGSGKFEEDSMHYASALQQSICHPSSSMM 847
               NN E T Q  ++QFD+HQ+F +    G +G     +D +     L  +IC P S+ +
Sbjct: 176  TVANNLEMTTQSDYNQFDMHQDFDHELFIGPMGL--CGQDGVPNIPGLLPNICPPPSAFL 233

Query: 846  KPKCALWDCCVPAQ----YQDYCCDIHASSAFNEGQSGMTPVVRHRGISLQDDPLFATLH 679
             PKCALWDC  PAQ     QDYC   HAS A NEG  GMTPV+R  GI L+D PLFA L 
Sbjct: 234  GPKCALWDCPRPAQGSEWCQDYCSSFHASLALNEGPPGMTPVLRPGGIGLKDGPLFAALS 293

Query: 678  AKMEGKDVGIPECEGAATMKCPWNSPELFDISFFEGETIREWLYFDKPRKAFKCGNRKQK 499
            AK +GKDVGIPECEGAAT K PWN+PELFD+S  EGE IREWL+FDKPR+AF+ GNRKQ+
Sbjct: 294  AKTQGKDVGIPECEGAATSKSPWNAPELFDLSVLEGEIIREWLFFDKPRRAFESGNRKQR 353

Query: 498  KLPDYSGRGWHESRGQMMKEYGGVKKSYYMDPQPLERFAWHLYEYVMDNCDALILCRLTL 319
             LPDYSGRGWHESR Q+MKE+GG+K+SYYMDPQPL  F WHLYEY +++CDA  L RL L
Sbjct: 354  SLPDYSGRGWHESRKQVMKEFGGLKRSYYMDPQPLTCFEWHLYEYEINHCDACALYRLEL 413

Query: 318  KFVDEKKSPKGKVIKNSIAELQKQMGRLVAESPTDNELSVKHETEDNLKDDSETVYSTQE 139
            K VD KKSPKGKVI +S+A+LQKQMGRL AE PTD + S K  T+ N K  +  +YS   
Sbjct: 414  KLVDGKKSPKGKVINDSLADLQKQMGRLTAEFPTDVKRSTKGRTKVNKKVGARNIYSAPN 473

Query: 138  QMAPSNDGRY*RASAAYGYKVQN 70
             M P+ +      S +Y Y  +N
Sbjct: 474  LMTPTAETFSYGLSGSYNYLPEN 496


Top