BLASTX nr result

ID: Coptis23_contig00000916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000916
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553978.1| PREDICTED: uncharacterized protein LOC100816...   111   7e-23
ref|XP_003548886.1| PREDICTED: uncharacterized protein LOC100800...   109   3e-22
ref|XP_004143761.1| PREDICTED: uncharacterized protein LOC101222...   101   6e-20
dbj|BAK07883.1| predicted protein [Hordeum vulgare subsp. vulgare]    100   1e-19
ref|XP_002321083.1| predicted protein [Populus trichocarpa] gi|1...    99   3e-19

>ref|XP_003553978.1| PREDICTED: uncharacterized protein LOC100816092 [Glycine max]
          Length = 190

 Score =  111 bits (277), Expect = 7e-23
 Identities = 56/96 (58%), Positives = 70/96 (72%), Gaps = 8/96 (8%)
 Frame = +1

Query: 79  MACTLDFRYLDEGLGGTGNKRKR--------DENNINESSMMDLDNNLNRPSKRLAIPSL 234
           MACT+DFR LDEG GG   KRKR        D+N I+ +S+MD D+ L  P+KR A+PS 
Sbjct: 1   MACTIDFRCLDEGFGGKTYKRKREQQSQPQHDDNAIDGASLMDTDDALPPPAKRSAVPSS 60

Query: 235 TNQEKPFYGKPSYDGVIAGKVSGRKWKQVRQQRSSS 342
            N +KP +G+ SYDGVIAG+VSGRKWKQVRQ R+S+
Sbjct: 61  ENPDKPVFGQASYDGVIAGRVSGRKWKQVRQHRASA 96


>ref|XP_003548886.1| PREDICTED: uncharacterized protein LOC100800534 [Glycine max]
          Length = 193

 Score =  109 bits (272), Expect = 3e-22
 Identities = 55/99 (55%), Positives = 71/99 (71%), Gaps = 11/99 (11%)
 Frame = +1

Query: 79  MACTLDFRYLDEGLGGTGNKRKRDENN-----------INESSMMDLDNNLNRPSKRLAI 225
           MACT+DFR LDEG GG   KRKR++ +           I+ +S+MD D+ L  P+KR A+
Sbjct: 1   MACTIDFRCLDEGFGGKTYKRKREQQSQPQHDAAADDVIDGASLMDTDDALPPPAKRSAL 60

Query: 226 PSLTNQEKPFYGKPSYDGVIAGKVSGRKWKQVRQQRSSS 342
           PS  N +KP +G PSYDGVIAG+VSGRKWKQVRQ+R+S+
Sbjct: 61  PSSENPDKPAFGHPSYDGVIAGRVSGRKWKQVRQRRASA 99


>ref|XP_004143761.1| PREDICTED: uncharacterized protein LOC101222479 [Cucumis sativus]
           gi|449526267|ref|XP_004170135.1| PREDICTED:
           uncharacterized LOC101222479 [Cucumis sativus]
          Length = 191

 Score =  101 bits (252), Expect = 6e-20
 Identities = 53/97 (54%), Positives = 67/97 (69%), Gaps = 9/97 (9%)
 Frame = +1

Query: 79  MACTLDFRYLDEGLGGTGNKRKRDE--------NNINESSMMDLDNNLNRP-SKRLAIPS 231
           MACT+DFR LDEG GG   KRKR+E         + N  + M++D++L  P +KR AIPS
Sbjct: 1   MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTGMEIDDSLPPPPAKRSAIPS 60

Query: 232 LTNQEKPFYGKPSYDGVIAGKVSGRKWKQVRQQRSSS 342
             N +KP YG P+YDGVI GKVSGRKWKQ R+ R+S+
Sbjct: 61  SENPDKPTYGNPTYDGVIGGKVSGRKWKQARKHRTSA 97


>dbj|BAK07883.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 199

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/89 (57%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
 Frame = +1

Query: 79  MACTLDFRYLDEGLGGTGNKRKRDENNINESSMMDLDNNLNRPSKRLAIPSLTNQEKP-F 255
           MA  LDFRYLDEGLGG   KRKR E   + +  MDLD +  RPSK  A+PS ++  KP  
Sbjct: 1   MASHLDFRYLDEGLGGERGKRKRREEEADAADSMDLDADAPRPSKLRAVPSQSDPSKPAA 60

Query: 256 YGKPSYDGVIAGKVSGRKWKQVRQQRSSS 342
           +G+P+YDGVIAG+VSGR WK+ R +RSS+
Sbjct: 61  FGQPTYDGVIAGRVSGRTWKEPRTRRSSA 89


>ref|XP_002321083.1| predicted protein [Populus trichocarpa] gi|118486447|gb|ABK95063.1|
           unknown [Populus trichocarpa]
           gi|222861856|gb|EEE99398.1| predicted protein [Populus
           trichocarpa]
          Length = 192

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 2/90 (2%)
 Frame = +1

Query: 79  MACTLDFRYLDEGLGGTGNKRKRDENNINESSMMDLDNNLNRPS-KRLAIPSLTNQEKPF 255
           MACT+DFR LDEG GG   KRKR+E  +  ++  D    ++ P+ KR AIPS  N +KP 
Sbjct: 1   MACTIDFRRLDEGFGGKTYKRKREEEALQLTATTDASMEIDAPAAKRTAIPSSDNPDKPV 60

Query: 256 -YGKPSYDGVIAGKVSGRKWKQVRQQRSSS 342
             GKP+YDGV+AGKVSGRKWKQ R+QR+S+
Sbjct: 61  AVGKPTYDGVMAGKVSGRKWKQPRKQRASA 90


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