BLASTX nr result

ID: Coptis23_contig00000909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000909
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282569.1| PREDICTED: probable ADP-ribosylation factor ...   247   4e-63
emb|CAN69475.1| hypothetical protein VITISV_014376 [Vitis vinife...   243   5e-62
ref|XP_002534010.1| ARF GTPase activator, putative [Ricinus comm...   232   1e-58
ref|NP_001185174.1| calcium-dependent lipid-binding domain [Arab...   232   1e-58
ref|NP_175292.2| calcium-dependent lipid-binding domain [Arabido...   232   1e-58

>ref|XP_002282569.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD11-like [Vitis vinifera]
          Length = 181

 Score =  247 bits (630), Expect = 4e-63
 Identities = 117/154 (75%), Positives = 138/154 (89%)
 Frame = -3

Query: 464 GLSVMEHLLGLLKIRVRRGINLAVRDVRSSDPYVVIKIGKQKVKTSVMYNNVNPEWNEDL 285
           G S+ME+LLGLL++RV+RGINLAVRDVRSSDPY VIK+GKQK+KT VM  NVNPEWNEDL
Sbjct: 13  GTSLMENLLGLLRVRVKRGINLAVRDVRSSDPYAVIKMGKQKLKTRVMKKNVNPEWNEDL 72

Query: 284 TLSISDASLPVKLTVYDKDTFSMDDKMGDAEFDIKPFLEAVKMHLVDLPSGTIVTKVTPS 105
           TLSISD +LP+KLTVYD DTFS DDKMGDAEF I P+LEA++MHL  LPSGTI+++V PS
Sbjct: 73  TLSISDPNLPIKLTVYDHDTFSKDDKMGDAEFTINPYLEALRMHLEGLPSGTIISRVQPS 132

Query: 104 RQNCLSEESRIIWVNGSILQNICLRLRNVECGEV 3
           RQNCL+EES I+W +G ++Q+ICLRLRNVECGEV
Sbjct: 133 RQNCLAEESCIVWTDGRVVQDICLRLRNVECGEV 166


>emb|CAN69475.1| hypothetical protein VITISV_014376 [Vitis vinifera]
           gi|297734335|emb|CBI15582.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score =  243 bits (620), Expect = 5e-62
 Identities = 115/150 (76%), Positives = 135/150 (90%)
 Frame = -3

Query: 452 MEHLLGLLKIRVRRGINLAVRDVRSSDPYVVIKIGKQKVKTSVMYNNVNPEWNEDLTLSI 273
           ME+LLGLL++RV+RGINLAVRDVRSSDPY VIK+GKQK+KT VM  NVNPEWNEDLTLSI
Sbjct: 1   MENLLGLLRVRVKRGINLAVRDVRSSDPYAVIKMGKQKLKTRVMKKNVNPEWNEDLTLSI 60

Query: 272 SDASLPVKLTVYDKDTFSMDDKMGDAEFDIKPFLEAVKMHLVDLPSGTIVTKVTPSRQNC 93
           SD +LP+KLTVYD DTFS DDKMGDAEF I P+LEA++MHL  LPSGTI+++V PSRQNC
Sbjct: 61  SDPNLPIKLTVYDHDTFSKDDKMGDAEFTINPYLEALRMHLEGLPSGTIISRVQPSRQNC 120

Query: 92  LSEESRIIWVNGSILQNICLRLRNVECGEV 3
           L+EES I+W +G ++Q+ICLRLRNVECGEV
Sbjct: 121 LAEESCIVWTDGRVVQDICLRLRNVECGEV 150


>ref|XP_002534010.1| ARF GTPase activator, putative [Ricinus communis]
           gi|223525988|gb|EEF28372.1| ARF GTPase activator,
           putative [Ricinus communis]
          Length = 169

 Score =  232 bits (592), Expect = 1e-58
 Identities = 105/152 (69%), Positives = 134/152 (88%)
 Frame = -3

Query: 458 SVMEHLLGLLKIRVRRGINLAVRDVRSSDPYVVIKIGKQKVKTSVMYNNVNPEWNEDLTL 279
           S +E L+GLL+I V RG+NLA+RDV +SDPY+V+K+GKQK+KT V+  N+NPEWNEDLTL
Sbjct: 3   SNIESLMGLLRIHVHRGVNLAIRDVLTSDPYIVVKLGKQKLKTRVVKKNINPEWNEDLTL 62

Query: 278 SISDASLPVKLTVYDKDTFSMDDKMGDAEFDIKPFLEAVKMHLVDLPSGTIVTKVTPSRQ 99
           SIS+ +LPVK+ VYD+DTFS DDKMGDAEFDI PFLEA+KMHL  LPSGTI+T++ PSR+
Sbjct: 63  SISNPNLPVKIGVYDRDTFSRDDKMGDAEFDIHPFLEALKMHLQGLPSGTIITRIQPSRE 122

Query: 98  NCLSEESRIIWVNGSILQNICLRLRNVECGEV 3
           NCL+EES ++WV+G ++QN+ LRLRNVECGE+
Sbjct: 123 NCLAEESHVLWVDGKVVQNLFLRLRNVECGEI 154


>ref|NP_001185174.1| calcium-dependent lipid-binding domain [Arabidopsis thaliana]
           gi|8778695|gb|AAF79703.1|AC020889_11 T1N15.21
           [Arabidopsis thaliana] gi|332194199|gb|AEE32320.1|
           calcium-dependent lipid-binding domain [Arabidopsis
           thaliana]
          Length = 200

 Score =  232 bits (591), Expect = 1e-58
 Identities = 110/152 (72%), Positives = 133/152 (87%)
 Frame = -3

Query: 458 SVMEHLLGLLKIRVRRGINLAVRDVRSSDPYVVIKIGKQKVKTSVMYNNVNPEWNEDLTL 279
           S+M+ LLGLL+IR++RG+NLAVRD+ SSDPYVV+K+ KQK+KT V+Y NVNPEWNEDLTL
Sbjct: 35  SLMDSLLGLLRIRIKRGVNLAVRDLNSSDPYVVVKMAKQKLKTRVIYKNVNPEWNEDLTL 94

Query: 278 SISDASLPVKLTVYDKDTFSMDDKMGDAEFDIKPFLEAVKMHLVDLPSGTIVTKVTPSRQ 99
           S+SD +L V LTVYD DTF+ DDKMGDAEF IKPF+ A+KMHL DLPSGTIVT V PSR 
Sbjct: 95  SVSDPNLTVLLTVYDYDTFTKDDKMGDAEFGIKPFVNALKMHLHDLPSGTIVTTVQPSRD 154

Query: 98  NCLSEESRIIWVNGSILQNICLRLRNVECGEV 3
           NCL+EESR+IW +G ++Q+I LRLR+VECGEV
Sbjct: 155 NCLAEESRVIWSDGKLVQDIVLRLRHVECGEV 186


>ref|NP_175292.2| calcium-dependent lipid-binding domain [Arabidopsis thaliana]
           gi|194708798|gb|ACF88483.1| At1g48590 [Arabidopsis
           thaliana] gi|332194198|gb|AEE32319.1| calcium-dependent
           lipid-binding domain [Arabidopsis thaliana]
          Length = 169

 Score =  232 bits (591), Expect = 1e-58
 Identities = 110/152 (72%), Positives = 133/152 (87%)
 Frame = -3

Query: 458 SVMEHLLGLLKIRVRRGINLAVRDVRSSDPYVVIKIGKQKVKTSVMYNNVNPEWNEDLTL 279
           S+M+ LLGLL+IR++RG+NLAVRD+ SSDPYVV+K+ KQK+KT V+Y NVNPEWNEDLTL
Sbjct: 4   SLMDSLLGLLRIRIKRGVNLAVRDLNSSDPYVVVKMAKQKLKTRVIYKNVNPEWNEDLTL 63

Query: 278 SISDASLPVKLTVYDKDTFSMDDKMGDAEFDIKPFLEAVKMHLVDLPSGTIVTKVTPSRQ 99
           S+SD +L V LTVYD DTF+ DDKMGDAEF IKPF+ A+KMHL DLPSGTIVT V PSR 
Sbjct: 64  SVSDPNLTVLLTVYDYDTFTKDDKMGDAEFGIKPFVNALKMHLHDLPSGTIVTTVQPSRD 123

Query: 98  NCLSEESRIIWVNGSILQNICLRLRNVECGEV 3
           NCL+EESR+IW +G ++Q+I LRLR+VECGEV
Sbjct: 124 NCLAEESRVIWSDGKLVQDIVLRLRHVECGEV 155


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