BLASTX nr result

ID: Coptis23_contig00000902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000902
         (2122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314686.1| predicted protein [Populus trichocarpa] gi|2...   324   5e-86
ref|XP_002282784.1| PREDICTED: uncharacterized protein LOC100245...   311   6e-82
ref|XP_002517116.1| conserved hypothetical protein [Ricinus comm...   308   5e-81
ref|XP_004139816.1| PREDICTED: uncharacterized protein LOC101210...   291   4e-76
ref|XP_003632307.1| PREDICTED: uncharacterized protein LOC100855...   264   8e-68

>ref|XP_002314686.1| predicted protein [Populus trichocarpa] gi|222863726|gb|EEF00857.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  324 bits (831), Expect = 5e-86
 Identities = 180/324 (55%), Positives = 215/324 (66%), Gaps = 4/324 (1%)
 Frame = -3

Query: 1322 MLRKRSRAMTSNQAFKTGNGSPSSPKDKEMKPTSSFFGSPRFFTGFSGKGSSET-ESAMS 1146
            M++KRSR  TS QA  + + S  SP DK  KPTS     P+  TG + K  SET E+ MS
Sbjct: 1    MMKKRSRTATSKQALMSQHSSIPSPTDKFRKPTSF----PKLLTGLTFKNFSETAEAIMS 56

Query: 1145 PTSILDSKSFTAFVNPFWFDXXXXXXXXXXXXXXXXXXXXXXKHHQFDSKGVGLGIVDAL 966
            PTSILDSK F+   NPFW D                         + DSKG+GLGIVDAL
Sbjct: 57   PTSILDSKPFSGLKNPFWHDACPSPKTPEPDTRRHWD--------KLDSKGIGLGIVDAL 108

Query: 965  NDEETNQKLLNPDSRMVLFGSQLKIQIPSLPPSVISPTE-SPKSPSDFGIKTRNTQLGLI 789
            +DEET+  L  P+SRMVLFGSQLKIQIP LPP  +SPT+ SPK   DFGIKTRN+Q G  
Sbjct: 109  DDEETDSNLSKPESRMVLFGSQLKIQIPPLPPPFLSPTDQSPKLNGDFGIKTRNSQFG-- 166

Query: 788  SFSSGLSPLSVKNSLFXXXXXXXXXXXXPQVFTRCLSASDMELSEDYTCVISHGPNPKTT 609
            SFSSGLSP  VK SLF            P+VFT CLSAS+MELSEDYTCVI+HGP PKTT
Sbjct: 167  SFSSGLSPSPVKKSLFGSANSGMDTPNSPRVFTGCLSASEMELSEDYTCVITHGPVPKTT 226

Query: 608  HIFGDCIVENCCGVIGLSPS--KMDISYSADCSRFSPENFLSFCYNCKKKLGEGKDIYMY 435
            HIF +CIVE+CCG +G S S  K +  +  D   +  ++FLSFC +CKK L +GKDIY+Y
Sbjct: 227  HIFDNCIVESCCGAVGFSASSRKDNNRFLGDGLTYRSDSFLSFCSSCKKNLEQGKDIYIY 286

Query: 434  RGEKAFCSRECRYQEMLFDEGMEK 363
            RGE+AFCS ECRYQ ML +EG+++
Sbjct: 287  RGERAFCSNECRYQVMLLEEGIDE 310


>ref|XP_002282784.1| PREDICTED: uncharacterized protein LOC100245904 [Vitis vinifera]
          Length = 307

 Score =  311 bits (796), Expect = 6e-82
 Identities = 175/320 (54%), Positives = 210/320 (65%), Gaps = 1/320 (0%)
 Frame = -3

Query: 1322 MLRKRSRAMTSNQAFKTGNGSPSSPKDKEMKP-TSSFFGSPRFFTGFSGKGSSETESAMS 1146
            MLRKRSRA TS QA     GS  SP DK  +P +SSFF SPR FTGFS K  SETE+ MS
Sbjct: 1    MLRKRSRASTSKQALMADCGSLPSPTDKYRRPPSSSFFSSPRLFTGFSSKVFSETETMMS 60

Query: 1145 PTSILDSKSFTAFVNPFWFDXXXXXXXXXXXXXXXXXXXXXXKHHQFDSKGVGLGIVDAL 966
            PTSILDSK F+ F NPF                            + DS+ +GLGIVDAL
Sbjct: 61   PTSILDSKPFSGFRNPF---------TNTTSTIKPSEPEPRRHWDKLDSRMIGLGIVDAL 111

Query: 965  NDEETNQKLLNPDSRMVLFGSQLKIQIPSLPPSVISPTESPKSPSDFGIKTRNTQLGLIS 786
              +E++ KL  P+SRMVLFGSQLKIQIP LP SV+SP ESPKSP+DFGIKTRN+QLG   
Sbjct: 112  THDESDPKLSKPESRMVLFGSQLKIQIPPLPSSVLSPAESPKSPADFGIKTRNSQLG--P 169

Query: 785  FSSGLSPLSVKNSLFXXXXXXXXXXXXPQVFTRCLSASDMELSEDYTCVISHGPNPKTTH 606
            FS  LS    K S F            P++FT CLSA++MELSEDYTCVISHGPNP+TTH
Sbjct: 170  FSPCLSQSPAKKSGFGSANSGLEAPNSPRIFTGCLSATEMELSEDYTCVISHGPNPRTTH 229

Query: 605  IFGDCIVENCCGVIGLSPSKMDISYSADCSRFSPENFLSFCYNCKKKLGEGKDIYMYRGE 426
            IF +CIV       G S S+ +       +   PE+FL+FC++C+K +G+GKDIY+YRGE
Sbjct: 230  IFDNCIV-------GFSASRKE-------NDVFPESFLNFCHSCRKNIGQGKDIYIYRGE 275

Query: 425  KAFCSRECRYQEMLFDEGME 366
            KAFCS ECR +E++ +E ME
Sbjct: 276  KAFCSSECRQREIMLEERME 295


>ref|XP_002517116.1| conserved hypothetical protein [Ricinus communis]
            gi|223543751|gb|EEF45279.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 319

 Score =  308 bits (788), Expect = 5e-81
 Identities = 182/329 (55%), Positives = 213/329 (64%), Gaps = 4/329 (1%)
 Frame = -3

Query: 1322 MLRKRSRAMTSNQAFKTGNGSPSSPKDKEMKPTSSFFGSPRFFTGFSGKGSSET-ESAMS 1146
            M+RKRSR  +S Q       S  SP +K  KPTS     PR FTGFS K  SET ES MS
Sbjct: 1    MIRKRSRVSSSKQVLMADYSSILSPTEKYRKPTSF----PRLFTGFSFKNFSETTESVMS 56

Query: 1145 PTSILDSKSFTAFVNPFWFDXXXXXXXXXXXXXXXXXXXXXXKHHQFDSKGVGLGIVDAL 966
            PTSILDSK F+ F NPF  D                         + DSKG+GL IVDAL
Sbjct: 57   PTSILDSKPFSGFRNPFLPDQNLTPKTQESDTKRTWD--------KLDSKGIGLAIVDAL 108

Query: 965  N-DEETNQKLLNPDSRMVLFGSQLKIQIPSLPPSVISPTE-SPKSPSDFGIKTRNTQLGL 792
            N D++T+  L  P+SRMVLFGSQLKIQ+P LP   +SPT+ SPKSP+DFGIKTR++QLG 
Sbjct: 109  NYDDKTDSNLSKPESRMVLFGSQLKIQVPPLP---VSPTDQSPKSPADFGIKTRHSQLG- 164

Query: 791  ISFSSGLSPLSVKNSLFXXXXXXXXXXXXPQVFTRCLSASDMELSEDYTCVISHGPNPKT 612
             S SSGLS   VK S+             P VF   LSA +ME SEDYTCVIS+GPNPKT
Sbjct: 165  -SSSSGLSHSPVKKSVCGSANSSIDTSSSPGVFNGSLSAIEMEQSEDYTCVISYGPNPKT 223

Query: 611  THIFGDCIVENCCGVIGLSPSKMDIS-YSADCSRFSPENFLSFCYNCKKKLGEGKDIYMY 435
            THIF D IVE+CC V+  S S+   + +  D S +  +NFLSFCY CKK LG+GKDIYMY
Sbjct: 224  THIFDDYIVESCCDVVEFSTSRTQTNGFLGDGSSYPSDNFLSFCYACKKNLGQGKDIYMY 283

Query: 434  RGEKAFCSRECRYQEMLFDEGMEKSNMED 348
            RGEKAFCS ECRYQEML +EG++K + ED
Sbjct: 284  RGEKAFCSSECRYQEMLSEEGIDKLDHED 312


>ref|XP_004139816.1| PREDICTED: uncharacterized protein LOC101210425 [Cucumis sativus]
            gi|449492592|ref|XP_004159042.1| PREDICTED:
            uncharacterized LOC101210425 [Cucumis sativus]
          Length = 294

 Score =  291 bits (746), Expect = 4e-76
 Identities = 161/301 (53%), Positives = 189/301 (62%)
 Frame = -3

Query: 1265 GSPSSPKDKEMKPTSSFFGSPRFFTGFSGKGSSETESAMSPTSILDSKSFTAFVNPFWFD 1086
            G   SP     K +SSFFGSPR FT  S KG SETE+ MSPTSIL+   F    N FW +
Sbjct: 11   GCLPSPTSNSRKLSSSFFGSPRLFTSSSSKGLSETEAVMSPTSILEP--FLGLRNSFWGE 68

Query: 1085 XXXXXXXXXXXXXXXXXXXXXXKHHQFDSKGVGLGIVDALNDEETNQKLLNPDSRMVLFG 906
                                      +DSKG+GL IVD L +E ++ K   PD+RMV+ G
Sbjct: 69   SNSPRTQLTESK------------RPWDSKGIGLAIVDGLTEENSDPKPSKPDTRMVVLG 116

Query: 905  SQLKIQIPSLPPSVISPTESPKSPSDFGIKTRNTQLGLISFSSGLSPLSVKNSLFXXXXX 726
            SQLKIQIP LPP V    +SP SP +FGIKTRN+ LG +S  S LSP   K S F     
Sbjct: 117  SQLKIQIPPLPPFVSPTDDSPVSPIEFGIKTRNSHLGSLSPVSSLSP--AKKSAFGSSSS 174

Query: 725  XXXXXXXPQVFTRCLSASDMELSEDYTCVISHGPNPKTTHIFGDCIVENCCGVIGLSPSK 546
                   P VFT CLSA ++E SEDYTCVISHGPNPKTTHIFGDC++E+ CGV   SP +
Sbjct: 175  GQETPNSPLVFTGCLSAGEIEQSEDYTCVISHGPNPKTTHIFGDCVIESGCGV--YSPVR 232

Query: 545  MDISYSADCSRFSPENFLSFCYNCKKKLGEGKDIYMYRGEKAFCSRECRYQEMLFDEGME 366
             +  +  D + FSPENFLSFC NCKK L +GKDIYMYRGEKAFCS ECRYQEM+ +E  E
Sbjct: 233  KENGFFRDRTSFSPENFLSFCNNCKKNLEQGKDIYMYRGEKAFCSDECRYQEMMLEEEEE 292

Query: 365  K 363
            +
Sbjct: 293  E 293


>ref|XP_003632307.1| PREDICTED: uncharacterized protein LOC100855273 [Vitis vinifera]
            gi|296085215|emb|CBI28710.3| unnamed protein product
            [Vitis vinifera]
          Length = 293

 Score =  264 bits (674), Expect = 8e-68
 Identities = 153/319 (47%), Positives = 190/319 (59%), Gaps = 3/319 (0%)
 Frame = -3

Query: 1322 MLRKRSRAMTSNQAFKTGNGSPSSPKDKEMKPTSSFFGSPRFFTGFSGKGSSETESAMSP 1143
            MLR RSRA+ S QA    + S  SP +   KP S   GSP+ F GF  K   E E  +SP
Sbjct: 1    MLRNRSRAVASKQAIMGDHSSLPSPTENLTKPISFLLGSPKIFRGFISKCLPEAEDIISP 60

Query: 1142 TSILDSKSFTAFVNPFWFDXXXXXXXXXXXXXXXXXXXXXXKHHQFDSKGVGLGIVDA-- 969
            TSI D+K F+   NPF ++                           DS G+G+ ++D+  
Sbjct: 61   TSIFDTKPFSG--NPFEYEKTQASPGTFSETKRSW--------ENLDSIGIGVALIDSDP 110

Query: 968  LNDEETNQKLLNPDSRMVLFGSQLKIQIPSLPPSVISPTESPKSPSDFGIKTRNTQLGLI 789
            +N E  N+    P+SRMVLFGSQLK+QIP L PS +SP ESPKSP+DFGIKTRN+QL  +
Sbjct: 111  INGEGANENFSKPNSRMVLFGSQLKVQIPHLQPSALSPAESPKSPADFGIKTRNSQLASL 170

Query: 788  S-FSSGLSPLSVKNSLFXXXXXXXXXXXXPQVFTRCLSASDMELSEDYTCVISHGPNPKT 612
            S F S  S +  K+S              P++FT       MELSE+YTCVISHGPNP+T
Sbjct: 171  SPFGSLNSGIQTKDS--------------PRIFT------GMELSEEYTCVISHGPNPRT 210

Query: 611  THIFGDCIVENCCGVIGLSPSKMDISYSADCSRFSPENFLSFCYNCKKKLGEGKDIYMYR 432
            THIF +CIVE+CCGV  LS +  +     +     PENFLS C+ CKK L + +DIY+YR
Sbjct: 211  THIFDNCIVESCCGVSALSQN--NYCTFPENPNSPPENFLSCCHTCKKNLSQERDIYIYR 268

Query: 431  GEKAFCSRECRYQEMLFDE 375
            GEKAFCS ECR QEMLFDE
Sbjct: 269  GEKAFCSHECRSQEMLFDE 287


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