BLASTX nr result

ID: Coptis23_contig00000889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000889
         (1052 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518692.1| conserved hypothetical protein [Ricinus comm...   364   2e-98
ref|XP_002300232.1| predicted protein [Populus trichocarpa] gi|2...   362   6e-98
ref|XP_004136964.1| PREDICTED: kynurenine formamidase-like [Cucu...   362   8e-98
gb|AFK40095.1| unknown [Medicago truncatula]                          360   2e-97
ref|XP_002869098.1| cyclase family protein [Arabidopsis lyrata s...   360   2e-97

>ref|XP_002518692.1| conserved hypothetical protein [Ricinus communis]
           gi|223542073|gb|EEF43617.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 274

 Score =  364 bits (935), Expect = 2e-98
 Identities = 181/274 (66%), Positives = 222/274 (81%), Gaps = 2/274 (0%)
 Frame = -1

Query: 977 MSSPLVVLLILTYTFELSLCTSPTQQAYPSL-NSDSCESTQFETDPLVPPRREVYGNGRI 801
           MS+ ++ LL+L   F  S   + +  AYP++  +     T  + D L P RREVYG+G+I
Sbjct: 1   MSNSIISLLVLLLLFSSSSTATASISAYPTIPGAVDTTFTATQHDNLTPIRREVYGDGKI 60

Query: 800 FDITHKFRESLPAFNSKTGLGKFIWLDESMKNGSGANLSKFELVVHTGTHVDAPGHMFDH 621
            DI+HK+  ++P++ S  GLG+F+WL  SMKNGS AN S+ +L  HTGTHVDAPGH+FDH
Sbjct: 61  LDISHKYTTNMPSWGSDEGLGQFLWLPASMKNGSLANNSEMKLPTHTGTHVDAPGHVFDH 120

Query: 620 YYDAGFDVDSLDLEVLNGPALLVDVPRDKNITAEVMESLNIPRGVHRVLFRTLNTDRRLM 441
           Y+DAGFDVD+LDLEVLNG ALLVDVPRD NITAEVM+SL+IP+GV RVLFRTLNTDR+LM
Sbjct: 121 YFDAGFDVDTLDLEVLNGHALLVDVPRDSNITAEVMKSLHIPKGVRRVLFRTLNTDRQLM 180

Query: 440 WKSEFDTSFVGFMKDGAQWLVDNTDIKLVGVDYLSVATFDDLFPTHYVFLQGREIILVEG 261
           +K +FDTS+VGF KDGA+WLV+NTDIK+VG+DYLSVA + DL P+H VFL+GREIILVEG
Sbjct: 181 FKRQFDTSYVGFTKDGAKWLVENTDIKMVGIDYLSVAAYSDLIPSHLVFLEGREIILVEG 240

Query: 260 LKLDDINPGIYSVHCLPLR-LPADGSPIRCILIK 162
           LKLD+I  GIYSVHCLPLR L A+GSPIRCILIK
Sbjct: 241 LKLDNIQAGIYSVHCLPLRLLGAEGSPIRCILIK 274


>ref|XP_002300232.1| predicted protein [Populus trichocarpa] gi|222847490|gb|EEE85037.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score =  362 bits (930), Expect = 6e-98
 Identities = 181/271 (66%), Positives = 221/271 (81%), Gaps = 2/271 (0%)
 Frame = -1

Query: 968 PLVVLLILTYTFELSLCTSPTQQAYPSLNSDSCES-TQFETDPLVPPRREVYGNGRIFDI 792
           PL++LL+L+      L T+ +  AYP++      S +  + D L+P R E+YGNG+IFDI
Sbjct: 3   PLLLLLLLS-----PLSTTASTAAYPTIPGTIDTSVSSSQPDNLIPIRNEIYGNGKIFDI 57

Query: 791 THKFRESLPAFNSKTGLGKFIWLDESMKNGSGANLSKFELVVHTGTHVDAPGHMFDHYYD 612
           +H++   +P ++SK GLGKF+ L  SMKNGS AN S+ +L  HTGTHVD+PGH+FDHY+D
Sbjct: 58  SHRYINDMPVWDSKDGLGKFLSLPASMKNGSLANNSEMKLPTHTGTHVDSPGHVFDHYFD 117

Query: 611 AGFDVDSLDLEVLNGPALLVDVPRDKNITAEVMESLNIPRGVHRVLFRTLNTDRRLMWKS 432
           +GFDVD+LDLEVLNGPALLVDVPR  NITAEVM+SL+IP+GV RVLFRTLNTDRRLM+K 
Sbjct: 118 SGFDVDTLDLEVLNGPALLVDVPRHSNITAEVMKSLHIPKGVRRVLFRTLNTDRRLMFKR 177

Query: 431 EFDTSFVGFMKDGAQWLVDNTDIKLVGVDYLSVATFDDLFPTHYVFLQGREIILVEGLKL 252
           EFD S+VGF KDGA+WLVDNTDIKLVG+DYLSVA + DL P+H VFL+GREIILVE LKL
Sbjct: 178 EFDRSYVGFTKDGAKWLVDNTDIKLVGIDYLSVAAWSDLIPSHLVFLEGREIILVEALKL 237

Query: 251 DDINPGIYSVHCLPLRL-PADGSPIRCILIK 162
           DDI PG+YSVHCLPLRL  A+GSPIRC+LIK
Sbjct: 238 DDIQPGVYSVHCLPLRLFGAEGSPIRCVLIK 268


>ref|XP_004136964.1| PREDICTED: kynurenine formamidase-like [Cucumis sativus]
          Length = 272

 Score =  362 bits (929), Expect = 8e-98
 Identities = 180/265 (67%), Positives = 209/265 (78%), Gaps = 2/265 (0%)
 Frame = -1

Query: 950 ILTYTFELSLCTSPTQQAYPSLNSDSCESTQFETDPLVPPRREVYGNGRIFDITHKFRES 771
           +L   F+  L  + +  AYPS+              L P RREVY NGRI DI+H+F   
Sbjct: 8   LLFLLFQALLLAAASTTAYPSVVDTGPTDCSLSDGDLTPIRREVYDNGRIIDISHRFTTD 67

Query: 770 LPAFNSKTGLGKFIWLDESMKNGSGANLSKFELVVHTGTHVDAPGHMFDHYYDAGFDVDS 591
           +PA+ S  GLG+F+WL +SMKNGS AN S+ +L  HTGTHVDAPGH+FDHY+DAGFDVD+
Sbjct: 68  MPAWESDQGLGQFLWLPKSMKNGSLANNSEMKLPAHTGTHVDAPGHVFDHYFDAGFDVDT 127

Query: 590 LDLEVLNGPALLVDVPRDKNITAEVMESLNIPRGVHRVLFRTLNTDRRLMWKSEFDTSFV 411
           LDLEVLNGP LLVDVPRDKNITAEVM+SLNIP+GV RVLFRTLNTDR LMWK EFDTS+V
Sbjct: 128 LDLEVLNGPGLLVDVPRDKNITAEVMKSLNIPKGVRRVLFRTLNTDRGLMWKKEFDTSYV 187

Query: 410 GFMKDGAQWLVDNTDIKLVG-VDYLSVATFDDLFPTHYVFLQGREIILVEGLKLDDINPG 234
           GFMKDGA+WLV+NTDIKLV  +DYLSVA F DL P+H  FL+GRE ILVEGLKLD + PG
Sbjct: 188 GFMKDGAKWLVENTDIKLVVLIDYLSVAAFKDLIPSHLEFLRGRETILVEGLKLDGVQPG 247

Query: 233 IYSVHCLPLR-LPADGSPIRCILIK 162
           +YS+HCLPLR L A+GSPIRCILIK
Sbjct: 248 LYSIHCLPLRLLGAEGSPIRCILIK 272


>gb|AFK40095.1| unknown [Medicago truncatula]
          Length = 254

 Score =  360 bits (925), Expect = 2e-97
 Identities = 173/230 (75%), Positives = 202/230 (87%), Gaps = 1/230 (0%)
 Frame = -1

Query: 848 DPLVPPRREVYGNGRIFDITHKFRESLPAFNSKTGLGKFIWLDESMKNGSGANLSKFELV 669
           D L+PPRREVY NG+IFDITH+++  +PAF +  G+G+F+WL +SMKNGS AN S+ +L 
Sbjct: 24  DNLIPPRREVYDNGKIFDITHRYQPDMPAFETNDGIGQFLWLPKSMKNGSIANNSEMKLP 83

Query: 668 VHTGTHVDAPGHMFDHYYDAGFDVDSLDLEVLNGPALLVDVPRDKNITAEVMESLNIPRG 489
            HTGTHVDAPGH+FDHY+DAGFDVDSLDL VLNGPALLVDVPRD NITAEVM+SLNIPRG
Sbjct: 84  THTGTHVDAPGHVFDHYFDAGFDVDSLDLHVLNGPALLVDVPRDSNITAEVMKSLNIPRG 143

Query: 488 VHRVLFRTLNTDRRLMWKSEFDTSFVGFMKDGAQWLVDNTDIKLVGVDYLSVATFDDLFP 309
           V RVLFRTLNTDRRLM++ EFD+S+VGF  DGA+WLV+NTDIKLVG+DYLSVA++D L P
Sbjct: 144 VKRVLFRTLNTDRRLMFQKEFDSSYVGFTVDGAKWLVENTDIKLVGIDYLSVASYDYLIP 203

Query: 308 THYVFLQGREIILVEGLKLDDINPGIYSVHCLPLRLP-ADGSPIRCILIK 162
           +H VFL+ RE ILVE LKLDDI PG+YSVHCLPLRL  A+GSPIRCILIK
Sbjct: 204 SHLVFLKDRESILVESLKLDDIPPGLYSVHCLPLRLAGAEGSPIRCILIK 253


>ref|XP_002869098.1| cyclase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314934|gb|EFH45357.1| cyclase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 272

 Score =  360 bits (925), Expect = 2e-97
 Identities = 179/272 (65%), Positives = 220/272 (80%), Gaps = 1/272 (0%)
 Frame = -1

Query: 977 MSSPLVVLLILTYTFELSLCTSPTQQAYPSLNSDSCESTQFETDPLVPPRREVYGNGRIF 798
           M+ P + LL+   +    L ++    AYPS+   +     F TD L P RREVYG+G+I+
Sbjct: 1   MAVPPLFLLLTLLSLPSLLISASASDAYPSIPGTAPIDGGF-TDELKPIRREVYGHGKIY 59

Query: 797 DITHKFRESLPAFNSKTGLGKFIWLDESMKNGSGANLSKFELVVHTGTHVDAPGHMFDHY 618
           DI+H++   +P+++S  GLG+F+WL  SMKNGS AN S+ ++  HTGTHVD+PGH++D+Y
Sbjct: 60  DISHRYTPDMPSWDSSEGLGRFLWLAASMKNGSLANNSEMKIPTHTGTHVDSPGHVYDNY 119

Query: 617 YDAGFDVDSLDLEVLNGPALLVDVPRDKNITAEVMESLNIPRGVHRVLFRTLNTDRRLMW 438
           YDAGFDVDSLDL+VLNG ALLVDVP+DKNITAEVM+SL+IP+GV RVLFRTLNTDRRLM+
Sbjct: 120 YDAGFDVDSLDLQVLNGLALLVDVPKDKNITAEVMKSLHIPKGVSRVLFRTLNTDRRLMF 179

Query: 437 KSEFDTSFVGFMKDGAQWLVDNTDIKLVGVDYLSVATFDDLFPTHYVFLQGREIILVEGL 258
           K EFDTS+VGFMKDGAQWLVDNTDIKLVG+DYLSVA +DDL P+H VFL+ RE ILVEGL
Sbjct: 180 KKEFDTSYVGFMKDGAQWLVDNTDIKLVGIDYLSVAAYDDLIPSHLVFLKDRETILVEGL 239

Query: 257 KLDDINPGIYSVHCLPLRL-PADGSPIRCILI 165
           KLD +  G+YSVHCLPLRL  A+GSPIRCILI
Sbjct: 240 KLDGVKAGLYSVHCLPLRLVGAEGSPIRCILI 271


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