BLASTX nr result
ID: Coptis23_contig00000880
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00000880
(2156 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274576.1| PREDICTED: protein Red isoform 1 [Vitis vini... 754 0.0
ref|XP_002274600.1| PREDICTED: protein Red isoform 2 [Vitis vini... 741 0.0
ref|XP_003546528.1| PREDICTED: protein Red-like [Glycine max] 719 0.0
ref|XP_003533803.1| PREDICTED: protein Red [Glycine max] 712 0.0
ref|XP_002516205.1| red protein, putative [Ricinus communis] gi|... 709 0.0
>ref|XP_002274576.1| PREDICTED: protein Red isoform 1 [Vitis vinifera]
gi|297738505|emb|CBI27750.3| unnamed protein product
[Vitis vinifera]
Length = 566
Score = 754 bits (1946), Expect = 0.0
Identities = 392/580 (67%), Positives = 426/580 (73%), Gaps = 4/580 (0%)
Frame = +2
Query: 206 NRHSKPTSRGEVKKEELEGPKYRDRAKERREDQNPDYEPTELGSFHAVAPPGNVDLRLAD 385
N K R E K EE E PKYRDRAKERREDQNPDYEPTELGSFHAVAPPG VDLR D
Sbjct: 7 NHKEKIIRRKEEKPEEPELPKYRDRAKERREDQNPDYEPTELGSFHAVAPPGTVDLRSTD 66
Query: 386 AQKISIENSKYLGGDVEHTHLVKGLDFALLNKVRSEIDKKPDVGDEADGKPRVSKEDQVL 565
A KISIE+SKYLGGDVEHTHLVKGLD+ALL+KVRSEI+KKP+VGD+ADGK RVS EDQ L
Sbjct: 67 ANKISIEHSKYLGGDVEHTHLVKGLDYALLHKVRSEIEKKPEVGDDADGKSRVSNEDQPL 126
Query: 566 TFRTETAKSVYQWTVKPQTTGKLNEMFLPGRMAFIFNVEDGFSHDIPTTVHRSKADCPVP 745
+FRT TAKSVYQW VKPQT K NEMFLPGRMAFIF++E GFS DIPTT+HRSKADCPVP
Sbjct: 127 SFRTATAKSVYQWIVKPQTVVKSNEMFLPGRMAFIFSMEGGFSSDIPTTLHRSKADCPVP 186
Query: 746 EEMVTVSVDGSVLDRITKIMSYLRXXXXXXXXXXXXXXXXXXXXXXXAVANGDNEDEKPA 925
EEMVTV VDGSVLDRI KIMSYLR V N +E++KP+
Sbjct: 187 EEMVTVGVDGSVLDRIAKIMSYLR-LGSSGKVLKKKKKERDVKGKISTVGNEFDEEKKPS 245
Query: 926 HAQGRMLKHQTERERLPSP-PPLKSYLDSTEKQSPPIVRVEEDDIFVGEGIDYTIPNKDV 1102
G M K+QTERE LP P PP K+Y+DS EK P + R E+DDIFVG+G++Y IP+KD+
Sbjct: 246 KLDGGMSKNQTERESLPPPLPPRKNYVDSREKHGPSVARSEQDDIFVGDGVEYDIPSKDM 305
Query: 1103 SQSPASEDMQESPRNRETQNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1282
SQSP SEDM+ESPRN+E +Y
Sbjct: 306 SQSPVSEDMEESPRNKERISY-------------------LSEPAYGPVPPSEPQEWQQT 346
Query: 1283 XXXXAMQAQVGPSGYQEVWQEYPNAEQFAYPEQYLQQNLQAYDVQAGTNFPQDPRLMTQE 1462
AMQAQ +GYQ WQEY AEQ AYPEQYLQQN+Q YDVQAG PQDPR MTQE
Sbjct: 347 NGYDAMQAQALAAGYQGDWQEYQYAEQMAYPEQYLQQNMQTYDVQAGMGIPQDPRFMTQE 406
Query: 1463 EKDRGFGSVFKRDDERLQQLREKDAREKDPGFISESYSECYPGYQEYNRXXXXXXXXXXX 1642
EKDRG GSVFKRDD+RLQQLREKDAREKDP FISESYSECYPGYQEYNR
Sbjct: 407 EKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPGYQEYNREVVDSDDEDDL 466
Query: 1643 XXXXXGGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKL 1822
GGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKL
Sbjct: 467 SKMDMGGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKL 526
Query: 1823 TNELHKINKILARK---KGESHDDDGEYDDEMQPGKKIRV 1933
TNELHKINKILARK KGE +DD G YDD+ QPGKK+R+
Sbjct: 527 TNELHKINKILARKKMEKGEMNDDGGRYDDDSQPGKKLRI 566
>ref|XP_002274600.1| PREDICTED: protein Red isoform 2 [Vitis vinifera]
Length = 567
Score = 741 bits (1914), Expect = 0.0
Identities = 388/581 (66%), Positives = 424/581 (72%), Gaps = 5/581 (0%)
Frame = +2
Query: 206 NRHSKPTSRGEVKKEELEGPKYRDRAKERREDQNPDYEPTELGSFHAVAPPGNVDLRLAD 385
N K R E K EE E PKYRDRAKERREDQNPDYEPTELGSFHAVAPPG VDLR D
Sbjct: 7 NHKEKIIRRKEEKPEEPELPKYRDRAKERREDQNPDYEPTELGSFHAVAPPGTVDLRSTD 66
Query: 386 AQKISIENSKYLGGDVEHTHLVKGLDFALLNKVRSEIDKKPDVGDEADG-KPRVSKEDQV 562
A KISIE+SKYLGGDVEHTHLVKGLD+ALL+KVRSEI+KKP+VGD+ADG K ++DQ
Sbjct: 67 ANKISIEHSKYLGGDVEHTHLVKGLDYALLHKVRSEIEKKPEVGDDADGNKTSNPRKDQP 126
Query: 563 LTFRTETAKSVYQWTVKPQTTGKLNEMFLPGRMAFIFNVEDGFSHDIPTTVHRSKADCPV 742
L+FRT TAKSVYQW VKPQT K NEMFLPGRMAFIF++E GFS DIPTT+HRSKADCPV
Sbjct: 127 LSFRTATAKSVYQWIVKPQTVVKSNEMFLPGRMAFIFSMEGGFSSDIPTTLHRSKADCPV 186
Query: 743 PEEMVTVSVDGSVLDRITKIMSYLRXXXXXXXXXXXXXXXXXXXXXXXAVANGDNEDEKP 922
PEEMVTV VDGSVLDRI KIMSYLR V N +E++KP
Sbjct: 187 PEEMVTVGVDGSVLDRIAKIMSYLR-LGSSGKVLKKKKKERDVKGKISTVGNEFDEEKKP 245
Query: 923 AHAQGRMLKHQTERERLPSP-PPLKSYLDSTEKQSPPIVRVEEDDIFVGEGIDYTIPNKD 1099
+ G M K+QTERE LP P PP K+Y+DS EK P + R E+DDIFVG+G++Y IP+KD
Sbjct: 246 SKLDGGMSKNQTERESLPPPLPPRKNYVDSREKHGPSVARSEQDDIFVGDGVEYDIPSKD 305
Query: 1100 VSQSPASEDMQESPRNRETQNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1279
+SQSP SEDM+ESPRN+E +Y
Sbjct: 306 MSQSPVSEDMEESPRNKERISY-------------------LSEPAYGPVPPSEPQEWQQ 346
Query: 1280 XXXXXAMQAQVGPSGYQEVWQEYPNAEQFAYPEQYLQQNLQAYDVQAGTNFPQDPRLMTQ 1459
AMQAQ +GYQ WQEY AEQ AYPEQYLQQN+Q YDVQAG PQDPR MTQ
Sbjct: 347 TNGYDAMQAQALAAGYQGDWQEYQYAEQMAYPEQYLQQNMQTYDVQAGMGIPQDPRFMTQ 406
Query: 1460 EEKDRGFGSVFKRDDERLQQLREKDAREKDPGFISESYSECYPGYQEYNRXXXXXXXXXX 1639
EEKDRG GSVFKRDD+RLQQLREKDAREKDP FISESYSECYPGYQEYNR
Sbjct: 407 EEKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPGYQEYNREVVDSDDEDD 466
Query: 1640 XXXXXXGGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQK 1819
GGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQK
Sbjct: 467 LSKMDMGGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQK 526
Query: 1820 LTNELHKINKILARK---KGESHDDDGEYDDEMQPGKKIRV 1933
LTNELHKINKILARK KGE +DD G YDD+ QPGKK+R+
Sbjct: 527 LTNELHKINKILARKKMEKGEMNDDGGRYDDDSQPGKKLRI 567
>ref|XP_003546528.1| PREDICTED: protein Red-like [Glycine max]
Length = 565
Score = 719 bits (1855), Expect = 0.0
Identities = 373/580 (64%), Positives = 416/580 (71%), Gaps = 4/580 (0%)
Frame = +2
Query: 206 NRHSKPTSRGEVKKEELEGPKYRDRAKERREDQNPDYEPTELGSFHAVAPPGNVDLRLAD 385
N KP R E K EE E PKYRDRAKERREDQNPDYE TELG FHAVAPPG VD+R +D
Sbjct: 8 NHKEKPIRRKEEKPEEPEVPKYRDRAKERREDQNPDYEQTELG-FHAVAPPGTVDIRSSD 66
Query: 386 AQKISIENSKYLGGDVEHTHLVKGLDFALLNKVRSEIDKKPDVGDEADGKPRVSKEDQVL 565
A K+SIE SKYLGGDVEHTHLVKGLD+ALLNKVRSEIDKKP+ GD+ +GK R +KEDQ +
Sbjct: 67 AHKLSIEKSKYLGGDVEHTHLVKGLDYALLNKVRSEIDKKPETGDDVEGKSRSAKEDQQV 126
Query: 566 TFRTETAKSVYQWTVKPQTTGKLNEMFLPGRMAFIFNVEDGFSHDIPTTVHRSKADCPVP 745
+ RT TAKSVYQW VKPQT K NEMFLPGRM FI+N+E G+ HDIPTT+HRSKADCPVP
Sbjct: 127 SIRTATAKSVYQWIVKPQTISKTNEMFLPGRMTFIYNMEGGYHHDIPTTLHRSKADCPVP 186
Query: 746 EEMVTVSVDGSVLDRITKIMSYLRXXXXXXXXXXXXXXXXXXXXXXXAVANGDNEDEKPA 925
EEMVTV+VDGSVLDRI KIMSYLR AV NG ++++KP+
Sbjct: 187 EEMVTVNVDGSVLDRIAKIMSYLR-LGSSGKILKKKKKEKDAKGKILAVGNGFDKEDKPS 245
Query: 926 HAQGRMLKHQTERERLPSPPPLKSYLDSTEKQSPPIVRVEEDDIFVGEGIDYTIPNKDVS 1105
+G K+QTE+E +P PP K+ L S EKQ P + R E+DDIFVGEG+ Y +P KD+S
Sbjct: 246 KVEGG-AKNQTEKEIIPPPPIKKNPLHSREKQGPAVARAEDDDIFVGEGVHYDVPGKDLS 304
Query: 1106 QSPASEDMQESPRNRETQNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1285
QSP SEDM+ESPRN+E +Y
Sbjct: 305 QSPVSEDMEESPRNKEKPSY------------------VTEPTYGPVPPSMVPQGWQETN 346
Query: 1286 XXXAMQAQVGPSGYQEVWQEYPNAEQFAYPEQYLQQNLQAYDVQAGTNFPQDPRLMTQEE 1465
MQ Q +GYQ WQEY AEQ AYP+QYLQQN+Q YDVQAG N PQDPR M+QEE
Sbjct: 347 GYDVMQTQAFDAGYQGEWQEYQYAEQLAYPDQYLQQNMQPYDVQAGLNLPQDPRFMSQEE 406
Query: 1466 KDRGFGSVFKRDDERLQQLREKDAREKDPGFISESYSECYPGYQEYNRXXXXXXXXXXXX 1645
KDRG GSVFKRDD+RLQQLRE+DAREKDP FISESYSECYPGYQEYNR
Sbjct: 407 KDRGLGSVFKRDDQRLQQLRERDAREKDPNFISESYSECYPGYQEYNREIVDSDDEDDLS 466
Query: 1646 XXXXGGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLT 1825
GGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKL
Sbjct: 467 KMDMGGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLN 526
Query: 1826 NELHKINKILARKKGESHDDDGE----YDDEMQPGKKIRV 1933
N+LHKINKILARKK E D +GE YDDE PGKK+R+
Sbjct: 527 NDLHKINKILARKKMEK-DTNGEGGHHYDDEPTPGKKLRI 565
>ref|XP_003533803.1| PREDICTED: protein Red [Glycine max]
Length = 567
Score = 712 bits (1838), Expect = 0.0
Identities = 376/582 (64%), Positives = 416/582 (71%), Gaps = 6/582 (1%)
Frame = +2
Query: 206 NRHSKPTSRGEVKKEELEGPKYRDRAKERREDQNPDYEPTELGSFHAVAPPGNVDLRLAD 385
N KP R E K EE E PKYRDRAKERREDQNPDYE TELG FHAVAPPG VD+R +D
Sbjct: 8 NPKEKPIRRKEEKPEEPEVPKYRDRAKERREDQNPDYEQTELG-FHAVAPPGTVDIRSSD 66
Query: 386 AQKISIENSKYLGGDVEHTHLVKGLDFALLNKVRSEIDKKPDVGDEADGKPRVSKEDQVL 565
A K+SIE SKYLGGDVEHTHLVKGLD+ALLNKVRSEIDKKP+ GD+ +GK R + EDQ +
Sbjct: 67 AHKLSIEKSKYLGGDVEHTHLVKGLDYALLNKVRSEIDKKPEAGDDVEGKSRSAMEDQQV 126
Query: 566 TFRTETAKSVYQWTVKPQTTGKLNEMFLPGRMAFIFNVEDGFSHDIPTTVHRSKADCPVP 745
+ RT TAKSVYQW VKPQT K NEMFLPGRM FI+N+E G+ HDIPTT+HRSKADCPVP
Sbjct: 127 SIRTATAKSVYQWIVKPQTISKTNEMFLPGRMTFIYNMEGGYHHDIPTTLHRSKADCPVP 186
Query: 746 EEMVTVSVDGSVLDRITKIMSYLRXXXXXXXXXXXXXXXXXXXXXXXAVANGDNEDEKPA 925
EEMVTV+VDGSVLDRI KIMSYLR AV NG ++++KP+
Sbjct: 187 EEMVTVNVDGSVLDRIAKIMSYLR-LGSSGKILKKKRKEKDAKGKILAVGNGFDKEDKPS 245
Query: 926 HAQGRMLKHQTERE-RLPSPPPL-KSYLDSTEKQSPPIVRVEEDDIFVGEGIDYTIPNKD 1099
+G K+QTE+E LP PPP+ K+ L S EKQ P + R E+DDIFVGEG+DY IP KD
Sbjct: 246 KVEGG-AKNQTEKEIILPPPPPIKKNPLHSIEKQGPAVARAEDDDIFVGEGVDYDIPGKD 304
Query: 1100 VSQSPASEDMQESPRNRETQNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1279
+SQSP SEDM+ESPRN+E +Y
Sbjct: 305 LSQSPVSEDMEESPRNKEKPSY------------------FTEPTYGPVQPSMVPQGWQE 346
Query: 1280 XXXXXAMQAQVGPSGYQEVWQEYPNAEQFAYPEQYLQQNLQAYDVQAGTNFPQDPRLMTQ 1459
MQ Q +GYQ WQEY AEQ AYP+QYLQQN+QAYD QA N P DPR MTQ
Sbjct: 347 TNGYDVMQTQALAAGYQGEWQEYQYAEQLAYPDQYLQQNMQAYDEQADLNLPLDPRFMTQ 406
Query: 1460 EEKDRGFGSVFKRDDERLQQLREKDAREKDPGFISESYSECYPGYQEYNRXXXXXXXXXX 1639
EEKDRG GSVFKRDD+RLQQLREKDAREKDP FISESYSECYPGYQEYNR
Sbjct: 407 EEKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPGYQEYNREIVDSDDEDD 466
Query: 1640 XXXXXXGGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQK 1819
GGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQK
Sbjct: 467 LSKMDMGGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQK 526
Query: 1820 LTNELHKINKILARKKGESHDDDGE----YDDEMQPGKKIRV 1933
L N+LHKINKILARKK E D +GE YDDE PGKK+R+
Sbjct: 527 LNNDLHKINKILARKKMEK-DTNGEGGNHYDDEPTPGKKLRI 567
>ref|XP_002516205.1| red protein, putative [Ricinus communis] gi|223544691|gb|EEF46207.1|
red protein, putative [Ricinus communis]
Length = 567
Score = 709 bits (1829), Expect = 0.0
Identities = 374/580 (64%), Positives = 412/580 (71%), Gaps = 4/580 (0%)
Frame = +2
Query: 206 NRHSKPTSRGEVKKEELEGPKYRDRAKERREDQNPDYEPTELGSFHAVAPPGNVDLRLAD 385
N K R E K EE E PKYRDRAKERREDQNPDYEPTELGSFHAVAPPG VD R AD
Sbjct: 7 NYKEKIARRKEEKAEEPETPKYRDRAKERREDQNPDYEPTELGSFHAVAPPGAVDTRSAD 66
Query: 386 AQKISIENSKYLGGDVEHTHLVKGLDFALLNKVRSEIDKKPDVGDEADGKPRVSKEDQVL 565
A KISIE SKYLGGDVEHTHLVKGLD+ALLNKVRSEIDKKPD GD+ADGK R SKEDQ L
Sbjct: 67 AHKISIEKSKYLGGDVEHTHLVKGLDYALLNKVRSEIDKKPDAGDDADGKSRKSKEDQQL 126
Query: 566 TFRTETAKSVYQWTVKPQTTGKLNEMFLPGRMAFIFNVEDGFSHDIPTTVHRSKADCPVP 745
+FRT TAKSVYQ VKPQ K NEMFLPGRM+FIFN+E G++HDIPTT+HRSKADCPVP
Sbjct: 127 SFRTATAKSVYQSIVKPQAIMKTNEMFLPGRMSFIFNMEGGYTHDIPTTLHRSKADCPVP 186
Query: 746 EEMVTVSVDGSVLDRITKIMSYLRXXXXXXXXXXXXXXXXXXXXXXXAVANGDNEDEKPA 925
EEMVTV+VDGSVLDRI KIMSYLR + + NE++K +
Sbjct: 187 EEMVTVNVDGSVLDRIAKIMSYLR-LGSSGKVLKKKKKEKDAKGKISVIGHEHNEEDKHS 245
Query: 926 HAQGRMLKHQTERERL--PSPPPLKSYLDSTEKQSPPIVRVEEDDIFVGEGIDYTIPNKD 1099
G + ++TERE L P PPP KS DS EKQ P + R EE+DIFVG+G+DY +P KD
Sbjct: 246 KPNGGISNNKTEREILPPPPPPPKKSQPDSHEKQGPIVARGEENDIFVGDGVDYDVPGKD 305
Query: 1100 VSQSPASEDMQESPRNRETQNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1279
+SQSP SEDM+ESPRN+E +Y
Sbjct: 306 MSQSPVSEDMEESPRNKERVSY------------------FSEPVYGPVPPSGPSQEWQD 347
Query: 1280 XXXXXAMQAQVGPSGYQEVWQEYPNAEQFAYPEQYLQQNLQAYDVQAGTNFPQDPRLMTQ 1459
A+QAQ SGYQ WQ+Y EQ AY EQYLQQ +QAYD+QA +N QDPR MTQ
Sbjct: 348 LNGYDAIQAQALASGYQGEWQDYQYTEQLAYSEQYLQQTMQAYDMQAASNVLQDPRFMTQ 407
Query: 1460 EEKDRGFGSVFKRDDERLQQLREKDAREKDPGFISESYSECYPGYQEYNRXXXXXXXXXX 1639
EEKDRG GSVFKRDD+RLQQLREKDAREKDP FISESYSECYPGYQEYNR
Sbjct: 408 EEKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPGYQEYNREVVDSDDEDD 467
Query: 1640 XXXXXXGGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQK 1819
GGRAKGRLHRWDFETEEEWA YNEQKEAMPKAA+QFGVKMQDGRKTRKQNKDQK
Sbjct: 468 LSKMDMGGRAKGRLHRWDFETEEEWAKYNEQKEAMPKAAYQFGVKMQDGRKTRKQNKDQK 527
Query: 1820 LTNELHKINKILARKKGESHDDDGEY--DDEMQPGKKIRV 1933
L NELHKINKILARKK E DG++ DD++Q KK R+
Sbjct: 528 LNNELHKINKILARKKMEKDSGDGDHFDDDDVQHAKKPRI 567