BLASTX nr result
ID: Coptis23_contig00000873
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00000873
(1356 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270610.1| PREDICTED: probable serine incorporator [Vit... 603 e-170
ref|XP_002304839.1| predicted protein [Populus trichocarpa] gi|2... 601 e-169
ref|XP_002297693.1| predicted protein [Populus trichocarpa] gi|1... 596 e-168
ref|NP_173069.1| serinc-domain containing protein [Arabidopsis t... 593 e-167
gb|EAZ24909.1| hypothetical protein OsJ_08689 [Oryza sativa Japo... 592 e-167
>ref|XP_002270610.1| PREDICTED: probable serine incorporator [Vitis vinifera]
gi|298204750|emb|CBI25248.3| unnamed protein product
[Vitis vinifera]
Length = 413
Score = 603 bits (1555), Expect = e-170
Identities = 287/390 (73%), Positives = 314/390 (80%)
Frame = +2
Query: 86 ISRRSARIAYCGLFGLSLIVAWILREVAAPLMEKIPWINHFTKTPNREWFETDAVLRVSL 265
ISRRSARIAYCGLF LSLIV+WILREVAAPLMEK+PWINHF KTPNREWFETDAVLRVS
Sbjct: 26 ISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPNREWFETDAVLRVSF 85
Query: 266 GNFLFFTIFALIMVGVKNQKDPRDRLHHGGWMMKVVTWCLLVIFMFFLPNGIVSFYESAS 445
GNFLFFTI A++M+GVKNQKDPRD +HHGGWMMK++ WC+LVIF FFLPN ++SFYE+ S
Sbjct: 86 GNFLFFTILAILMIGVKNQKDPRDGMHHGGWMMKIICWCILVIFTFFLPNELISFYETTS 145
Query: 446 KFGSGMFXXXXXXXXXDFVHGWNDAWVKKDEQFWYVALFVVSLVCYIATICFSGLLFHFF 625
KFGSG+F DFVH WND WV EQFWY+ALFVVSLVCY+AT FSGLLFHFF
Sbjct: 146 KFGSGLFLLVQVVLLLDFVHRWNDTWVGYGEQFWYIALFVVSLVCYVATFSFSGLLFHFF 205
Query: 626 VPSGHDCGLNIFFISMTLIFVFVFAIVALHPIVGGSLLPASVISLYCTYLCYSGLASEPR 805
PSGHDCGLN FFI MTLI FVFAIVALHP VGGS+LPASV+SLYC YLCYSGL+SEPR
Sbjct: 206 TPSGHDCGLNTFFIVMTLILAFVFAIVALHPAVGGSILPASVVSLYCMYLCYSGLSSEPR 265
Query: 806 DYECNGLHHHSKAXXXXXXXXXXXXXXXXXXYSAVRXXXXXXXXXXXXXXRAGADKPLLP 985
DYECNGLH HSKA YSAVR RAGA KPLLP
Sbjct: 266 DYECNGLHKHSKAVSTGTLTLGLLTTILSVIYSAVRAGSSTTLLSPPSSPRAGAGKPLLP 325
Query: 986 FQKTDEVDEKKDGKDRTVTYSYSFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPS 1165
+KTD +EK + K VTYSY+FFHIIFSLASMYSAMLLTGWSTSVGESG+LVDVGWPS
Sbjct: 326 LEKTDVPEEKHEAK--PVTYSYTFFHIIFSLASMYSAMLLTGWSTSVGESGRLVDVGWPS 383
Query: 1166 VWVRVITGWATAGLFIWSLVAPVLFPEREF 1255
VWVR++TGWATA L+IWSL AP+LFPEREF
Sbjct: 384 VWVRIVTGWATAALYIWSLAAPILFPEREF 413
>ref|XP_002304839.1| predicted protein [Populus trichocarpa] gi|222842271|gb|EEE79818.1|
predicted protein [Populus trichocarpa]
Length = 415
Score = 601 bits (1549), Expect = e-169
Identities = 291/390 (74%), Positives = 311/390 (79%)
Frame = +2
Query: 86 ISRRSARIAYCGLFGLSLIVAWILREVAAPLMEKIPWINHFTKTPNREWFETDAVLRVSL 265
ISRRSARIAYCGLF LSLIV+WILREVAAPLMEK+PWINHF KTP+REWFETDAVLRVSL
Sbjct: 26 ISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDAVLRVSL 85
Query: 266 GNFLFFTIFALIMVGVKNQKDPRDRLHHGGWMMKVVTWCLLVIFMFFLPNGIVSFYESAS 445
GNF+FFTI A +MVGVKNQKDPRD LHHGGWM KVV WC+LVI MFFLPN IVSFYES S
Sbjct: 86 GNFMFFTILATMMVGVKNQKDPRDSLHHGGWMAKVVCWCILVILMFFLPNEIVSFYESIS 145
Query: 446 KFGSGMFXXXXXXXXXDFVHGWNDAWVKKDEQFWYVALFVVSLVCYIATICFSGLLFHFF 625
KFGSG+F DFVHGWND WV DE+FWYVALFVVSLVCY+ T FSGLLFH+F
Sbjct: 146 KFGSGLFLLVQVVLLLDFVHGWNDKWVGYDEKFWYVALFVVSLVCYVGTFAFSGLLFHWF 205
Query: 626 VPSGHDCGLNIFFISMTLIFVFVFAIVALHPIVGGSLLPASVISLYCTYLCYSGLASEPR 805
PSG DCGLN FFI MTLIF FVFAIVALHP V GS+LPASVISLYC YLCYSGLASEPR
Sbjct: 206 TPSGQDCGLNTFFIVMTLIFAFVFAIVALHPAVNGSVLPASVISLYCMYLCYSGLASEPR 265
Query: 806 DYECNGLHHHSKAXXXXXXXXXXXXXXXXXXYSAVRXXXXXXXXXXXXXXRAGADKPLLP 985
+YECNGLH HSKA YSAVR RAGADKPLLP
Sbjct: 266 EYECNGLHRHSKAVSTGTLSIGLLTTVLSVVYSAVRAGSSTALLSPPSSPRAGADKPLLP 325
Query: 986 FQKTDEVDEKKDGKDRTVTYSYSFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPS 1165
E+K+ + VTYSYSFFHIIFSLASMYSAMLLTGWSTS+GESGKLVDVGWPS
Sbjct: 326 LDNKANEQEEKEKACKPVTYSYSFFHIIFSLASMYSAMLLTGWSTSIGESGKLVDVGWPS 385
Query: 1166 VWVRVITGWATAGLFIWSLVAPVLFPEREF 1255
VWVR++TGWATAGL+ WSLVAP+LFPEREF
Sbjct: 386 VWVRILTGWATAGLYTWSLVAPILFPEREF 415
>ref|XP_002297693.1| predicted protein [Populus trichocarpa] gi|118488403|gb|ABK96018.1|
unknown [Populus trichocarpa] gi|222844951|gb|EEE82498.1|
predicted protein [Populus trichocarpa]
Length = 414
Score = 596 bits (1537), Expect = e-168
Identities = 291/390 (74%), Positives = 310/390 (79%)
Frame = +2
Query: 86 ISRRSARIAYCGLFGLSLIVAWILREVAAPLMEKIPWINHFTKTPNREWFETDAVLRVSL 265
ISRRSARIAYCGLF LSLIV+WILREVAAPLME+IPWINHF KTP+REWFETDAVLRVSL
Sbjct: 26 ISRRSARIAYCGLFALSLIVSWILREVAAPLMEQIPWINHFHKTPDREWFETDAVLRVSL 85
Query: 266 GNFLFFTIFALIMVGVKNQKDPRDRLHHGGWMMKVVTWCLLVIFMFFLPNGIVSFYESAS 445
GNFLFFTI A++MVGVKNQKDPRD LHHGGWM KVV WCLLVIFMFFLPN IVSFYES S
Sbjct: 86 GNFLFFTILAIMMVGVKNQKDPRDSLHHGGWMAKVVCWCLLVIFMFFLPNEIVSFYESIS 145
Query: 446 KFGSGMFXXXXXXXXXDFVHGWNDAWVKKDEQFWYVALFVVSLVCYIATICFSGLLFHFF 625
KFGSG+F DFVHGWND WV DEQFWY ALF VS VCY+ T FSGLLFH+F
Sbjct: 146 KFGSGLFLLVQVVLLLDFVHGWNDKWVGYDEQFWYAALFAVSFVCYVGTFAFSGLLFHWF 205
Query: 626 VPSGHDCGLNIFFISMTLIFVFVFAIVALHPIVGGSLLPASVISLYCTYLCYSGLASEPR 805
SG DCGLN FFI MTLIF FVFAI ALHP V GS+LPASVISLYC YLCYSGL+SEPR
Sbjct: 206 TASGQDCGLNTFFIVMTLIFAFVFAIAALHPAVNGSVLPASVISLYCMYLCYSGLSSEPR 265
Query: 806 DYECNGLHHHSKAXXXXXXXXXXXXXXXXXXYSAVRXXXXXXXXXXXXXXRAGADKPLLP 985
+YECNGLH HSKA YSAVR RAGADKPLLP
Sbjct: 266 EYECNGLHRHSKAVSTSTLTIGLLTTVLSVVYSAVRAGSSTTLLSPPSSPRAGADKPLLP 325
Query: 986 FQKTDEVDEKKDGKDRTVTYSYSFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPS 1165
E+K+ K + VTYSYSFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPS
Sbjct: 326 LDNKPSEKEEKE-KAKPVTYSYSFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPS 384
Query: 1166 VWVRVITGWATAGLFIWSLVAPVLFPEREF 1255
VWVR++TGWATAGL+IWSLVAP+LFP+REF
Sbjct: 385 VWVRILTGWATAGLYIWSLVAPILFPDREF 414
>ref|NP_173069.1| serinc-domain containing protein [Arabidopsis thaliana]
gi|334182610|ref|NP_001185008.1| serinc-domain containing
protein [Arabidopsis thaliana]
gi|6587821|gb|AAF18512.1|AC010924_25 Contains similarity
to gb|AF181686 membrane protein TMS1d from Drosophila
melanogaster. ESTs gb|R64994, gb|AI994832, gb|Z47674 come
from this gene [Arabidopsis thaliana]
gi|332191295|gb|AEE29416.1| serinc-domain containing
protein [Arabidopsis thaliana]
gi|332191296|gb|AEE29417.1| serinc-domain containing
protein [Arabidopsis thaliana]
Length = 412
Score = 593 bits (1528), Expect = e-167
Identities = 287/390 (73%), Positives = 314/390 (80%)
Frame = +2
Query: 86 ISRRSARIAYCGLFGLSLIVAWILREVAAPLMEKIPWINHFTKTPNREWFETDAVLRVSL 265
ISRRSARIAYCGLF LSLIV+WILREVAAPLMEK+PWINHF KTP+REWFETDAVLRVSL
Sbjct: 26 ISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDAVLRVSL 85
Query: 266 GNFLFFTIFALIMVGVKNQKDPRDRLHHGGWMMKVVTWCLLVIFMFFLPNGIVSFYESAS 445
GNFLFF+I +++M+GVKNQKDPRD +HHGGWMMK++ WC+LVIFMFFLPN I+SFYES S
Sbjct: 86 GNFLFFSILSVMMIGVKNQKDPRDGIHHGGWMMKIICWCILVIFMFFLPNEIISFYESMS 145
Query: 446 KFGSGMFXXXXXXXXXDFVHGWNDAWVKKDEQFWYVALFVVSLVCYIATICFSGLLFHFF 625
KFG+G F DFVHGWND WV DEQFWY AL VVSLVCY+AT FSG LFH+F
Sbjct: 146 KFGAGFFLLVQVVLLLDFVHGWNDTWVGYDEQFWYAALLVVSLVCYLATFVFSGFLFHWF 205
Query: 626 VPSGHDCGLNIFFISMTLIFVFVFAIVALHPIVGGSLLPASVISLYCTYLCYSGLASEPR 805
PSGHDCGLN FFI MTLIFVFVFAIV LHP VGGS+LPASVISLYC YLCYSGLASEPR
Sbjct: 206 TPSGHDCGLNTFFIIMTLIFVFVFAIVVLHPTVGGSILPASVISLYCMYLCYSGLASEPR 265
Query: 806 DYECNGLHHHSKAXXXXXXXXXXXXXXXXXXYSAVRXXXXXXXXXXXXXXRAGADKPLLP 985
DYECNGLH+HSKA YSAVR R A+KPLLP
Sbjct: 266 DYECNGLHNHSKAVSTGTMTIGLLTTVLSVVYSAVRAGSSTTLLSPPDSPR--AEKPLLP 323
Query: 986 FQKTDEVDEKKDGKDRTVTYSYSFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPS 1165
E E+K+ K + V+YSY+FFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPS
Sbjct: 324 IDGKAEEKEEKENK-KPVSYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPS 382
Query: 1166 VWVRVITGWATAGLFIWSLVAPVLFPEREF 1255
VWVRV+T WATAGLFIWSLVAP+LFP+REF
Sbjct: 383 VWVRVVTSWATAGLFIWSLVAPILFPDREF 412
>gb|EAZ24909.1| hypothetical protein OsJ_08689 [Oryza sativa Japonica Group]
Length = 414
Score = 592 bits (1527), Expect = e-167
Identities = 282/392 (71%), Positives = 314/392 (80%)
Frame = +2
Query: 80 GSISRRSARIAYCGLFGLSLIVAWILREVAAPLMEKIPWINHFTKTPNREWFETDAVLRV 259
GSI RRSARIAYCGLF LSL+ +W LREVAAPL++ IPWINHF KTP+REWFETDAVLRV
Sbjct: 24 GSIGRRSARIAYCGLFALSLLASWALREVAAPLLQSIPWINHFHKTPDREWFETDAVLRV 83
Query: 260 SLGNFLFFTIFALIMVGVKNQKDPRDRLHHGGWMMKVVTWCLLVIFMFFLPNGIVSFYES 439
SLGNF+FFTI A+IM G+K+QKDPRD++HHGGWM K+ W ++V MFF+PNG+VSFYES
Sbjct: 84 SLGNFVFFTILAIIMAGIKDQKDPRDKIHHGGWMAKIFCWVVIVFLMFFVPNGVVSFYES 143
Query: 440 ASKFGSGMFXXXXXXXXXDFVHGWNDAWVKKDEQFWYVALFVVSLVCYIATICFSGLLFH 619
SKFGSG+F DFVHGWN+ WV KDEQFWY+AL VVS+VCYI T FSGLLFH
Sbjct: 144 ISKFGSGLFLLVQVVLLLDFVHGWNENWVAKDEQFWYMALLVVSVVCYIVTFSFSGLLFH 203
Query: 620 FFVPSGHDCGLNIFFISMTLIFVFVFAIVALHPIVGGSLLPASVISLYCTYLCYSGLASE 799
+F PSGHDCG+N+FFI TLI VFVFAIVALHP + GSLLPASVI+LYCTYLCYSGL+SE
Sbjct: 204 WFTPSGHDCGINLFFIVFTLILVFVFAIVALHPKINGSLLPASVIALYCTYLCYSGLSSE 263
Query: 800 PRDYECNGLHHHSKAXXXXXXXXXXXXXXXXXXYSAVRXXXXXXXXXXXXXXRAGADKPL 979
PRDYECNGLH+HSKA YSAVR RAGADKPL
Sbjct: 264 PRDYECNGLHNHSKAVSTGSLSLGLLTTILSVVYSAVRAGSSATVLSAPDSPRAGADKPL 323
Query: 980 LPFQKTDEVDEKKDGKDRTVTYSYSFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGW 1159
LPF K DE EKKD R VTYSYSFFH+IFSLASMYSAMLLTGWSTSVGESGKLVDVGW
Sbjct: 324 LPFSKADEEAEKKD-VPRPVTYSYSFFHLIFSLASMYSAMLLTGWSTSVGESGKLVDVGW 382
Query: 1160 PSVWVRVITGWATAGLFIWSLVAPVLFPEREF 1255
PSVWVR+ T WATAGL+IWSLVAP+LFP+REF
Sbjct: 383 PSVWVRIATQWATAGLYIWSLVAPLLFPDREF 414