BLASTX nr result
ID: Coptis23_contig00000870
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00000870 (302 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK45640.1| unknown [Lotus japonicus] 114 1e-23 gb|AFK42243.1| unknown [Medicago truncatula] 114 1e-23 ref|XP_003629717.1| 60S ribosomal protein L32 [Medicago truncatu... 112 2e-23 gb|AAZ32896.1| ribosomal protein L32 [Medicago sativa] 111 7e-23 gb|ACJ85920.1| unknown [Medicago truncatula] 110 9e-23 >gb|AFK45640.1| unknown [Lotus japonicus] Length = 133 Score = 114 bits (284), Expect = 1e-23 Identities = 55/70 (78%), Positives = 56/70 (80%) Frame = +1 Query: 91 MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 270 MAVPLL PQSDRKICVKQ+WRRPKGIDSRVRRKFKGVTLMPNIGYGS Sbjct: 1 MAVPLLTKKIIKKRVKRFIRPQSDRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60 Query: 271 DKKTRHYLPN 300 DKKTRHYLPN Sbjct: 61 DKKTRHYLPN 70 >gb|AFK42243.1| unknown [Medicago truncatula] Length = 133 Score = 114 bits (284), Expect = 1e-23 Identities = 55/70 (78%), Positives = 56/70 (80%) Frame = +1 Query: 91 MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 270 MAVPLL PQSDRKICVKQ+WRRPKGIDSRVRRKFKGVTLMPNIGYGS Sbjct: 1 MAVPLLTKKIVKKRVKRFIRPQSDRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60 Query: 271 DKKTRHYLPN 300 DKKTRHYLPN Sbjct: 61 DKKTRHYLPN 70 >ref|XP_003629717.1| 60S ribosomal protein L32 [Medicago truncatula] gi|217075658|gb|ACJ86189.1| unknown [Medicago truncatula] gi|355523739|gb|AET04193.1| 60S ribosomal protein L32 [Medicago truncatula] gi|388518931|gb|AFK47527.1| unknown [Medicago truncatula] Length = 133 Score = 112 bits (281), Expect = 2e-23 Identities = 54/70 (77%), Positives = 55/70 (78%) Frame = +1 Query: 91 MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 270 MAVPLL PQSDRKICVK+NWRRPKGIDSRVRRKFKG TLMPNIGYGS Sbjct: 1 MAVPLLTKKIVKKRVKHFKRPQSDRKICVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60 Query: 271 DKKTRHYLPN 300 DKKTRHYLPN Sbjct: 61 DKKTRHYLPN 70 >gb|AAZ32896.1| ribosomal protein L32 [Medicago sativa] Length = 133 Score = 111 bits (277), Expect = 7e-23 Identities = 54/70 (77%), Positives = 55/70 (78%) Frame = +1 Query: 91 MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 270 MAVPLL PQS RKICVKQ+WRRPKGIDSRVRRKFKGVTLMPNIGYGS Sbjct: 1 MAVPLLTKKIVKKRVKRFIRPQSGRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60 Query: 271 DKKTRHYLPN 300 DKKTRHYLPN Sbjct: 61 DKKTRHYLPN 70 >gb|ACJ85920.1| unknown [Medicago truncatula] Length = 133 Score = 110 bits (276), Expect = 9e-23 Identities = 54/70 (77%), Positives = 55/70 (78%) Frame = +1 Query: 91 MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 270 MAVPLL PQSDRKICVKQ+WRRPKGIDSRVRRKFKGVTLMPNIGYGS Sbjct: 1 MAVPLLTKKIVKKRVKRFIRPQSDRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60 Query: 271 DKKTRHYLPN 300 DKKTRHYL N Sbjct: 61 DKKTRHYLSN 70