BLASTX nr result

ID: Coptis23_contig00000870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000870
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45640.1| unknown [Lotus japonicus]                              114   1e-23
gb|AFK42243.1| unknown [Medicago truncatula]                          114   1e-23
ref|XP_003629717.1| 60S ribosomal protein L32 [Medicago truncatu...   112   2e-23
gb|AAZ32896.1| ribosomal protein L32 [Medicago sativa]                111   7e-23
gb|ACJ85920.1| unknown [Medicago truncatula]                          110   9e-23

>gb|AFK45640.1| unknown [Lotus japonicus]
          Length = 133

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/70 (78%), Positives = 56/70 (80%)
 Frame = +1

Query: 91  MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 270
           MAVPLL              PQSDRKICVKQ+WRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPLLTKKIIKKRVKRFIRPQSDRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 271 DKKTRHYLPN 300
           DKKTRHYLPN
Sbjct: 61  DKKTRHYLPN 70


>gb|AFK42243.1| unknown [Medicago truncatula]
          Length = 133

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/70 (78%), Positives = 56/70 (80%)
 Frame = +1

Query: 91  MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 270
           MAVPLL              PQSDRKICVKQ+WRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPLLTKKIVKKRVKRFIRPQSDRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 271 DKKTRHYLPN 300
           DKKTRHYLPN
Sbjct: 61  DKKTRHYLPN 70


>ref|XP_003629717.1| 60S ribosomal protein L32 [Medicago truncatula]
           gi|217075658|gb|ACJ86189.1| unknown [Medicago
           truncatula] gi|355523739|gb|AET04193.1| 60S ribosomal
           protein L32 [Medicago truncatula]
           gi|388518931|gb|AFK47527.1| unknown [Medicago
           truncatula]
          Length = 133

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/70 (77%), Positives = 55/70 (78%)
 Frame = +1

Query: 91  MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 270
           MAVPLL              PQSDRKICVK+NWRRPKGIDSRVRRKFKG TLMPNIGYGS
Sbjct: 1   MAVPLLTKKIVKKRVKHFKRPQSDRKICVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 271 DKKTRHYLPN 300
           DKKTRHYLPN
Sbjct: 61  DKKTRHYLPN 70


>gb|AAZ32896.1| ribosomal protein L32 [Medicago sativa]
          Length = 133

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/70 (77%), Positives = 55/70 (78%)
 Frame = +1

Query: 91  MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 270
           MAVPLL              PQS RKICVKQ+WRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPLLTKKIVKKRVKRFIRPQSGRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 271 DKKTRHYLPN 300
           DKKTRHYLPN
Sbjct: 61  DKKTRHYLPN 70


>gb|ACJ85920.1| unknown [Medicago truncatula]
          Length = 133

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/70 (77%), Positives = 55/70 (78%)
 Frame = +1

Query: 91  MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 270
           MAVPLL              PQSDRKICVKQ+WRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPLLTKKIVKKRVKRFIRPQSDRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 271 DKKTRHYLPN 300
           DKKTRHYL N
Sbjct: 61  DKKTRHYLSN 70


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