BLASTX nr result

ID: Coptis23_contig00000866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000866
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAZ32896.1| ribosomal protein L32 [Medicago sativa]                134   6e-30
gb|AFK42243.1| unknown [Medicago truncatula]                          133   1e-29
ref|XP_002303076.1| predicted protein [Populus trichocarpa] gi|2...   133   1e-29
ref|XP_002331857.1| predicted protein [Populus trichocarpa] gi|2...   133   1e-29
gb|AAR83884.1| ly200 protein [Capsicum annuum]                        133   1e-29

>gb|AAZ32896.1| ribosomal protein L32 [Medicago sativa]
          Length = 133

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/69 (92%), Positives = 68/69 (98%)
 Frame = +2

Query: 2   RHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVLTNKL 181
           RHYLPNGFKKF+VHNV DLE+LMMHNRTYCAEIAHNVST+KRKEIVERAAQLDVV+TNKL
Sbjct: 65  RHYLPNGFKKFVVHNVQDLELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNKL 124

Query: 182 ARLRSQEDE 208
           ARLRSQEDE
Sbjct: 125 ARLRSQEDE 133


>gb|AFK42243.1| unknown [Medicago truncatula]
          Length = 133

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/69 (91%), Positives = 68/69 (98%)
 Frame = +2

Query: 2   RHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVLTNKL 181
           RHYLPNGFKKF+VHNV DLE+LMMHNRTYCAEIAHNVST+KRK+IVERAAQLDVV+TNKL
Sbjct: 65  RHYLPNGFKKFVVHNVQDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVVTNKL 124

Query: 182 ARLRSQEDE 208
           ARLRSQEDE
Sbjct: 125 ARLRSQEDE 133


>ref|XP_002303076.1| predicted protein [Populus trichocarpa] gi|222844802|gb|EEE82349.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/69 (91%), Positives = 68/69 (98%)
 Frame = +2

Query: 2   RHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVLTNKL 181
           RHYLPNGFKKF+VHNV +LE+LMMHNRTYCAEIAHNVST+KRKEIVERAAQLDVV+TNKL
Sbjct: 65  RHYLPNGFKKFVVHNVGELEVLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNKL 124

Query: 182 ARLRSQEDE 208
           ARLRSQEDE
Sbjct: 125 ARLRSQEDE 133


>ref|XP_002331857.1| predicted protein [Populus trichocarpa]
           gi|224132224|ref|XP_002321286.1| predicted protein
           [Populus trichocarpa] gi|118483614|gb|ABK93702.1|
           unknown [Populus trichocarpa]
           gi|118484494|gb|ABK94122.1| unknown [Populus
           trichocarpa] gi|222862059|gb|EEE99601.1| predicted
           protein [Populus trichocarpa]
           gi|222875375|gb|EEF12506.1| predicted protein [Populus
           trichocarpa]
          Length = 133

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/69 (91%), Positives = 68/69 (98%)
 Frame = +2

Query: 2   RHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVLTNKL 181
           RHYLPNGFKKF+VHNV +LE+LMMHNRTYCAEIAHNVST+KRKEIVERAAQLDVV+TNKL
Sbjct: 65  RHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNKL 124

Query: 182 ARLRSQEDE 208
           ARLRSQEDE
Sbjct: 125 ARLRSQEDE 133


>gb|AAR83884.1| ly200 protein [Capsicum annuum]
          Length = 133

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/69 (91%), Positives = 68/69 (98%)
 Frame = +2

Query: 2   RHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVLTNKL 181
           RHYLPNGFKKF+VHN S+LE+LMMHNRTYCAEIAHNVST+KRKEIVERAAQLDVV+TNKL
Sbjct: 65  RHYLPNGFKKFVVHNASELEVLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNKL 124

Query: 182 ARLRSQEDE 208
           ARLRSQEDE
Sbjct: 125 ARLRSQEDE 133


Top