BLASTX nr result

ID: Coptis23_contig00000857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000857
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278691.2| PREDICTED: uncharacterized protein LOC100252...   147   6e-33
ref|XP_003525978.1| PREDICTED: uncharacterized protein LOC100790...   147   6e-33
emb|CAN70604.1| hypothetical protein VITISV_040194 [Vitis vinifera]   147   6e-33
ref|XP_003522228.1| PREDICTED: uncharacterized protein LOC100807...   144   5e-32
emb|CBI20613.3| unnamed protein product [Vitis vinifera]              141   4e-31

>ref|XP_002278691.2| PREDICTED: uncharacterized protein LOC100252590 [Vitis vinifera]
          Length = 400

 Score =  147 bits (371), Expect = 6e-33
 Identities = 112/261 (42%), Positives = 136/261 (52%), Gaps = 26/261 (9%)
 Frame = -2

Query: 707 KHRISGGGESAAVAETSVP---SSDFVLQWGNRKRLRCMKIQVKNEST-TDQTRVRINRG 540
           + R  G  + + +  +S P   +SDFVLQWGNRKRLRCMKIQVK++S    +T VR++R 
Sbjct: 139 RERSGGADDGSLLRASSEPRSTASDFVLQWGNRKRLRCMKIQVKDDSAPVHKTTVRVDRR 198

Query: 539 VVKPVKENIS--------------NFR-RPISXXXXXXPA-HRISRNSETMKSH--QCNG 414
           VV+  K++++              N R RP S      P   R+ RNSE   +   Q NG
Sbjct: 199 VVRADKDSLNQPTTTAAATSNGYFNLRHRPSSPQPPPPPPPQRVLRNSENSSAMKGQSNG 258

Query: 413 VIS-PEGAEEXXXXXXXXXXXXXXXXXXXXXXXSETA--AQDXXXXXXXXXSEAIP-VWL 246
           V      A +                       SETA  ++          SEA+P VW 
Sbjct: 259 VRGFSSPARDQDRRGNHHNANNHHHNNDNKSASSETAHDSKKGGGGSSSAGSEAVPPVWP 318

Query: 245 PKFVLALTNKEKEEDFMAXXXXXXXXXXXXXXXXXXXXEEDFMAIKGSKLPQRPKKRAKF 66
           PKFV+ALTNKEKEEDFM                          AIKGSKLPQRPKKRAKF
Sbjct: 319 PKFVIALTNKEKEEDFM--------------------------AIKGSKLPQRPKKRAKF 352

Query: 65  VQRTLNLVSPGAWLCDLTLER 3
           +QRTLNLVSPGAWLCDLTLER
Sbjct: 353 IQRTLNLVSPGAWLCDLTLER 373


>ref|XP_003525978.1| PREDICTED: uncharacterized protein LOC100790617 [Glycine max]
          Length = 279

 Score =  147 bits (371), Expect = 6e-33
 Identities = 95/235 (40%), Positives = 122/235 (51%), Gaps = 19/235 (8%)
 Frame = -2

Query: 650 SSDFVLQWGNRKRLRCMKIQVKNEST--TDQTRVRINRGVVKPVKENISNFRRPISXXXX 477
           +SD VLQWGNRKRLRCMK+QVK++S+    +T VR++R VV+  K++++     ++    
Sbjct: 43  TSDLVLQWGNRKRLRCMKVQVKDDSSGPVQRTTVRVDRRVVRTDKDSLNKLTFGVNNNNH 102

Query: 476 XXPAH--------------RISRNSET---MKSHQCNGVISPEGAEEXXXXXXXXXXXXX 348
              ++              RI RNSE+   M+  Q NG +S  G                
Sbjct: 103 HHQSNGYPNLRQRPSSPQPRILRNSESSSAMRGGQSNGGVSVRGIASPDRGAHDKRGTHN 162

Query: 347 XXXXXXXXXXSETAAQDXXXXXXXXXSEAIPVWLPKFVLALTNKEKEEDFMAXXXXXXXX 168
                     +   ++          + A PVW PKFV+ALTNKEKEEDF+         
Sbjct: 163 DNNKSAASSDTAHDSKKGGSPSGSGDAAAPPVWPPKFVIALTNKEKEEDFL--------- 213

Query: 167 XXXXXXXXXXXXEEDFMAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLER 3
                            AIKGSKLPQRPKKRAKF+QRTLNLVSPGAWLCDLTLER
Sbjct: 214 -----------------AIKGSKLPQRPKKRAKFIQRTLNLVSPGAWLCDLTLER 251


>emb|CAN70604.1| hypothetical protein VITISV_040194 [Vitis vinifera]
          Length = 481

 Score =  147 bits (371), Expect = 6e-33
 Identities = 112/261 (42%), Positives = 136/261 (52%), Gaps = 26/261 (9%)
 Frame = -2

Query: 707 KHRISGGGESAAVAETSVP---SSDFVLQWGNRKRLRCMKIQVKNEST-TDQTRVRINRG 540
           + R  G  + + +  +S P   +SDFVLQWGNRKRLRCMKIQVK++S    +T VR++R 
Sbjct: 220 RERSGGADDGSLLRASSEPRSTASDFVLQWGNRKRLRCMKIQVKDDSAPVHKTTVRVDRR 279

Query: 539 VVKPVKENIS--------------NFR-RPISXXXXXXPA-HRISRNSETMKSH--QCNG 414
           VV+  K++++              N R RP S      P   R+ RNSE   +   Q NG
Sbjct: 280 VVRADKDSLNQPTTTAAATSNGYFNLRHRPSSPQPPPPPPPQRVLRNSENSSAMKGQSNG 339

Query: 413 VIS-PEGAEEXXXXXXXXXXXXXXXXXXXXXXXSETA--AQDXXXXXXXXXSEAIP-VWL 246
           V      A +                       SETA  ++          SEA+P VW 
Sbjct: 340 VRGFSSPARDQDRRGNHHNANNHHHNNDNKSASSETAHDSKKGGGGSSSAGSEAVPPVWP 399

Query: 245 PKFVLALTNKEKEEDFMAXXXXXXXXXXXXXXXXXXXXEEDFMAIKGSKLPQRPKKRAKF 66
           PKFV+ALTNKEKEEDFM                          AIKGSKLPQRPKKRAKF
Sbjct: 400 PKFVIALTNKEKEEDFM--------------------------AIKGSKLPQRPKKRAKF 433

Query: 65  VQRTLNLVSPGAWLCDLTLER 3
           +QRTLNLVSPGAWLCDLTLER
Sbjct: 434 IQRTLNLVSPGAWLCDLTLER 454


>ref|XP_003522228.1| PREDICTED: uncharacterized protein LOC100807540 [Glycine max]
          Length = 281

 Score =  144 bits (363), Expect = 5e-32
 Identities = 100/265 (37%), Positives = 132/265 (49%), Gaps = 27/265 (10%)
 Frame = -2

Query: 716 VVKKHRISGGGESAAVAETSVPS------SDFVLQWGNRKRLRCMKIQVKNEST--TDQT 561
           ++   R   GG+ + +   S  S      S+ VLQWGNRKRLRCMK+QVK++S+    +T
Sbjct: 15  IMSSVREKNGGDGSLLLRASSDSARQATTSNLVLQWGNRKRLRCMKVQVKDDSSGPVQRT 74

Query: 560 RVRINRGVVKPVKENISNFRRPISXXXXXXPAH--------------RISRNSET---MK 432
            VR++R VV+  K++++     ++       ++              RI RNSE+   M+
Sbjct: 75  TVRVDRRVVRTDKDSLNKATFGVNYNNHHHQSNGYPNLRERPSSPQPRILRNSESSSAMR 134

Query: 431 SHQCNGVISPEGAEEXXXXXXXXXXXXXXXXXXXXXXXSETAAQDXXXXXXXXXSEAI-- 258
             Q NG +    + +                       S+TA             +A   
Sbjct: 135 GGQSNGGVRGIASPDRGAHDKRGAHNNLLNDNNKSAASSDTAHDSKKGGSPSGSGDAAAP 194

Query: 257 PVWLPKFVLALTNKEKEEDFMAXXXXXXXXXXXXXXXXXXXXEEDFMAIKGSKLPQRPKK 78
           PVW PKFV+ALTNKEKEEDF+                          AIKGSKLPQRPKK
Sbjct: 195 PVWPPKFVIALTNKEKEEDFL--------------------------AIKGSKLPQRPKK 228

Query: 77  RAKFVQRTLNLVSPGAWLCDLTLER 3
           RAKF+QRTLNLVSPGAWLCDLTLER
Sbjct: 229 RAKFIQRTLNLVSPGAWLCDLTLER 253


>emb|CBI20613.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score =  141 bits (355), Expect = 4e-31
 Identities = 111/276 (40%), Positives = 134/276 (48%), Gaps = 41/276 (14%)
 Frame = -2

Query: 707 KHRISGGGESAAVAETSVP---SSDFVLQWGNRKRLRCMKIQVKNEST-TDQTRVRINRG 540
           + R  G  + + +  +S P   +SDFVLQWGNRKRLRCMKIQVK++S    +T VR++R 
Sbjct: 24  RERSGGADDGSLLRASSEPRSTASDFVLQWGNRKRLRCMKIQVKDDSAPVHKTTVRVDRR 83

Query: 539 VVKPVKENIS--------------NFR---------------RPISXXXXXXPAHRI--- 456
           VV+  K++++              N R               R +         HR    
Sbjct: 84  VVRADKDSLNQPTTTAAATSNGYFNLRHRPSSPQPPPPPPPQRVLRSGYHNRDHHRSPFS 143

Query: 455 -SRNSETMKSHQCNGVIS-PEGAEEXXXXXXXXXXXXXXXXXXXXXXXSETA--AQDXXX 288
            S NS  MK  Q NGV      A +                       SETA  ++    
Sbjct: 144 NSENSSAMKG-QSNGVRGFSSPARDQDRRGNHHNANNHHHNNDNKSASSETAHDSKKGGG 202

Query: 287 XXXXXXSEAIP-VWLPKFVLALTNKEKEEDFMAXXXXXXXXXXXXXXXXXXXXEEDFMAI 111
                 SEA+P VW PKFV+ALTNKEKEEDFM                          AI
Sbjct: 203 GSSSAGSEAVPPVWPPKFVIALTNKEKEEDFM--------------------------AI 236

Query: 110 KGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLER 3
           KGSKLPQRPKKRAKF+QRTLNLVSPGAWLCDLTLER
Sbjct: 237 KGSKLPQRPKKRAKFIQRTLNLVSPGAWLCDLTLER 272


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