BLASTX nr result

ID: Coptis23_contig00000853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000853
         (1557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP73457.1| actin [Gossypium hirsutum] gi|219563046|gb|ACL278...   649   0.0  
gb|AEK70332.1| actin [Paeonia lactiflora] gi|340784775|gb|AEK703...   649   0.0  
ref|XP_002331880.1| actin 9 [Populus trichocarpa] gi|118481204|g...   649   0.0  
gb|AAN40685.1| actin [Stevia rebaudiana]                              649   0.0  
ref|XP_004147353.1| PREDICTED: actin-7-like [Cucumis sativus] gi...   648   0.0  

>gb|AAP73457.1| actin [Gossypium hirsutum] gi|219563046|gb|ACL27885.1| actin
            [Helianthus annuus] gi|219563048|gb|ACL27886.1| actin
            [Helianthus annuus] gi|306922316|dbj|BAJ17659.1| actin
            [Gynura bicolor]
          Length = 377

 Score =  649 bits (1674), Expect = 0.0
 Identities = 336/393 (85%), Positives = 337/393 (85%)
 Frame = -3

Query: 1480 MADSEDIQPLVCDNGTGMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRH 1301
            MAD+EDIQPLVCDNGTGMV                                       RH
Sbjct: 1    MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP------------------RH 42

Query: 1300 TGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE 1121
            TGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 43   TGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE 102

Query: 1120 HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 941
            HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS
Sbjct: 103  HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162

Query: 940  HTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVA 761
            HTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVA
Sbjct: 163  HTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVA 222

Query: 760  LDYXXXXXXXXXXXXXXXXXELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYN 581
            LDY                 ELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYN
Sbjct: 223  LDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYN 282

Query: 580  SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 401
            SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW
Sbjct: 283  SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342

Query: 400  IGGSILASLSTFQQMWISKGEYDESGPSIVHRK 302
            IGGSILASLSTFQQMWISKGEYDESGPSIVHRK
Sbjct: 343  IGGSILASLSTFQQMWISKGEYDESGPSIVHRK 375


>gb|AEK70332.1| actin [Paeonia lactiflora] gi|340784775|gb|AEK70337.1| actin [Paeonia
            lactiflora] gi|402693643|gb|AFQ89888.1| actin [Paeonia
            lactiflora]
          Length = 377

 Score =  649 bits (1674), Expect = 0.0
 Identities = 336/393 (85%), Positives = 337/393 (85%)
 Frame = -3

Query: 1480 MADSEDIQPLVCDNGTGMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRH 1301
            MAD+EDIQPLVCDNGTGMV                                       RH
Sbjct: 1    MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP------------------RH 42

Query: 1300 TGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE 1121
            TGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 43   TGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE 102

Query: 1120 HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 941
            HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS
Sbjct: 103  HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162

Query: 940  HTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVA 761
            HTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVA
Sbjct: 163  HTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVA 222

Query: 760  LDYXXXXXXXXXXXXXXXXXELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYN 581
            LDY                 ELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYN
Sbjct: 223  LDYEQELETSKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYN 282

Query: 580  SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 401
            SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW
Sbjct: 283  SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342

Query: 400  IGGSILASLSTFQQMWISKGEYDESGPSIVHRK 302
            IGGSILASLSTFQQMWISKGEYDESGPSIVHRK
Sbjct: 343  IGGSILASLSTFQQMWISKGEYDESGPSIVHRK 375


>ref|XP_002331880.1| actin 9 [Populus trichocarpa] gi|118481204|gb|ABK92553.1| unknown
            [Populus trichocarpa] gi|118482913|gb|ABK93370.1| unknown
            [Populus trichocarpa] gi|133925835|gb|ABO43670.1| actin
            [Populus trichocarpa] gi|222874629|gb|EEF11760.1| actin 9
            [Populus trichocarpa] gi|429326374|gb|AFZ78527.1| actin
            [Populus tomentosa]
          Length = 377

 Score =  649 bits (1674), Expect = 0.0
 Identities = 336/393 (85%), Positives = 337/393 (85%)
 Frame = -3

Query: 1480 MADSEDIQPLVCDNGTGMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRH 1301
            MADSEDIQPLVCDNGTGMV                                       RH
Sbjct: 1    MADSEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP------------------RH 42

Query: 1300 TGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE 1121
            TGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 43   TGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE 102

Query: 1120 HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 941
            HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS
Sbjct: 103  HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162

Query: 940  HTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVA 761
            HTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYMFTTTAEREIVRDMKEKLAYVA
Sbjct: 163  HTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVA 222

Query: 760  LDYXXXXXXXXXXXXXXXXXELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYN 581
            LDY                 ELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYN
Sbjct: 223  LDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYN 282

Query: 580  SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 401
            SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW
Sbjct: 283  SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342

Query: 400  IGGSILASLSTFQQMWISKGEYDESGPSIVHRK 302
            IGGSILASLSTFQQMWISKGEYDESGPSIVHRK
Sbjct: 343  IGGSILASLSTFQQMWISKGEYDESGPSIVHRK 375


>gb|AAN40685.1| actin [Stevia rebaudiana]
          Length = 377

 Score =  649 bits (1674), Expect = 0.0
 Identities = 336/393 (85%), Positives = 337/393 (85%)
 Frame = -3

Query: 1480 MADSEDIQPLVCDNGTGMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRH 1301
            MAD+EDIQPLVCDNGTGMV                                       RH
Sbjct: 1    MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP------------------RH 42

Query: 1300 TGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE 1121
            TGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 43   TGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE 102

Query: 1120 HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 941
            HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS
Sbjct: 103  HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162

Query: 940  HTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVA 761
            HTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVA
Sbjct: 163  HTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVA 222

Query: 760  LDYXXXXXXXXXXXXXXXXXELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYN 581
            LDY                 ELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYN
Sbjct: 223  LDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYN 282

Query: 580  SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 401
            SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW
Sbjct: 283  SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342

Query: 400  IGGSILASLSTFQQMWISKGEYDESGPSIVHRK 302
            IGGSILASLSTFQQMWISKGEYDESGPSIVHRK
Sbjct: 343  IGGSILASLSTFQQMWISKGEYDESGPSIVHRK 375


>ref|XP_004147353.1| PREDICTED: actin-7-like [Cucumis sativus]
            gi|449461823|ref|XP_004148641.1| PREDICTED: actin-7-like
            [Cucumis sativus] gi|449532903|ref|XP_004173417.1|
            PREDICTED: actin-7-like [Cucumis sativus]
          Length = 377

 Score =  648 bits (1671), Expect = 0.0
 Identities = 335/393 (85%), Positives = 337/393 (85%)
 Frame = -3

Query: 1480 MADSEDIQPLVCDNGTGMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRH 1301
            MAD+EDIQPLVCDNGTGMV                                       RH
Sbjct: 1    MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP------------------RH 42

Query: 1300 TGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE 1121
            TGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 43   TGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE 102

Query: 1120 HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 941
            HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS
Sbjct: 103  HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162

Query: 940  HTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVA 761
            HTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYMFTTTAEREIVRDMKEKLAYVA
Sbjct: 163  HTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVA 222

Query: 760  LDYXXXXXXXXXXXXXXXXXELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYN 581
            LDY                 ELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYN
Sbjct: 223  LDYEQELETAKSSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYN 282

Query: 580  SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 401
            SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW
Sbjct: 283  SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342

Query: 400  IGGSILASLSTFQQMWISKGEYDESGPSIVHRK 302
            IGGSILASLSTFQQMWISKGEYDESGPSIVHRK
Sbjct: 343  IGGSILASLSTFQQMWISKGEYDESGPSIVHRK 375


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