BLASTX nr result

ID: Coptis23_contig00000846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000846
         (1411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529641.1| conserved hypothetical protein [Ricinus comm...   372   e-100
ref|XP_002303409.1| predicted protein [Populus trichocarpa] gi|2...   361   3e-97
ref|XP_002327656.1| predicted protein [Populus trichocarpa] gi|2...   357   3e-96
emb|CAN62559.1| hypothetical protein VITISV_009207 [Vitis vinifera]   356   7e-96
ref|XP_003517165.1| PREDICTED: uncharacterized protein LOC100812...   356   9e-96

>ref|XP_002529641.1| conserved hypothetical protein [Ricinus communis]
            gi|223530867|gb|EEF32728.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 637

 Score =  372 bits (954), Expect = e-100
 Identities = 184/260 (70%), Positives = 214/260 (82%)
 Frame = -2

Query: 1236 LRSMWRSVYECHQVQTHIVDQLKFLNTIPSTEPTSEIHRQSTLQLELEVQQWHLAFCDLV 1057
            L  MWRS+YE HQVQTHIV QLK+LNTIPSTEPTSEIHRQSTLQLELEVQQWH +FC+L+
Sbjct: 378  LMCMWRSMYEAHQVQTHIVQQLKYLNTIPSTEPTSEIHRQSTLQLELEVQQWHQSFCNLI 437

Query: 1056 KAQRDYMHSLTGWLRLSLFQFNNEQLTKTRHNSAIYSLCEEWQQALDRIPDKVASEGIKS 877
            KAQRDY+ SLTGWLRLSLFQF+N  L++T   S IYSLCEEW  A+DRIPDKVASEGIKS
Sbjct: 438  KAQRDYIQSLTGWLRLSLFQFSNNPLSRTSQESRIYSLCEEWHHAIDRIPDKVASEGIKS 497

Query: 876  FLTVIHAIVVQQADEHKQKKKSEATFKELEKKVVELRSLECKYGPYVVAESYGSRRNRNP 697
            FLTVIHAIVVQQA+EHKQKKKSE TFKE EKKV ELRSLE KYGPY + ++ G+ R ++P
Sbjct: 498  FLTVIHAIVVQQAEEHKQKKKSELTFKEFEKKVSELRSLETKYGPYSMPDTSGNTRIKDP 557

Query: 696  VAEKQAKVDILRXXXXXXXXXXXKLICVTRAMTLNNLQMGSPNLFQALTGFSSVCMRVYE 517
            V EK+AKV+ILR           K + +TRAMT+NNLQMG P++FQA+ GFSSVCM  +E
Sbjct: 558  VTEKRAKVEILRSKAEEEKSKHEKSVSITRAMTINNLQMGFPHVFQAIVGFSSVCMHSFE 617

Query: 516  SVCNQTKDTDQCHDLKRLLP 457
            SV NQ K T+  +D+KR+LP
Sbjct: 618  SVYNQAKSTNLENDVKRILP 637


>ref|XP_002303409.1| predicted protein [Populus trichocarpa] gi|222840841|gb|EEE78388.1|
            predicted protein [Populus trichocarpa]
          Length = 654

 Score =  361 bits (926), Expect = 3e-97
 Identities = 178/257 (69%), Positives = 207/257 (80%)
 Frame = -2

Query: 1227 MWRSVYECHQVQTHIVDQLKFLNTIPSTEPTSEIHRQSTLQLELEVQQWHLAFCDLVKAQ 1048
            MWRS+YE HQVQTHIV QLK+LNTIPSTEPTSEIHRQSTLQLELEV QWH +FC++VKAQ
Sbjct: 398  MWRSMYELHQVQTHIVQQLKYLNTIPSTEPTSEIHRQSTLQLELEVHQWHQSFCNVVKAQ 457

Query: 1047 RDYMHSLTGWLRLSLFQFNNEQLTKTRHNSAIYSLCEEWQQALDRIPDKVASEGIKSFLT 868
            RDY+ SLTGWLRLSLFQF+   +++T   S IYSLCEEW  A+DRIPDKVASEGIKSFL 
Sbjct: 458  RDYIQSLTGWLRLSLFQFSKNPISRTSQESRIYSLCEEWHHAVDRIPDKVASEGIKSFLA 517

Query: 867  VIHAIVVQQADEHKQKKKSEATFKELEKKVVELRSLECKYGPYVVAESYGSRRNRNPVAE 688
            VIHAIVVQQA+EHKQKKKSE+ FKE EKK  ELRSLE KYGPY + E+  + R ++PV E
Sbjct: 518  VIHAIVVQQAEEHKQKKKSESAFKEFEKKAAELRSLESKYGPYSMPETPSTTRKKDPVME 577

Query: 687  KQAKVDILRXXXXXXXXXXXKLICVTRAMTLNNLQMGSPNLFQALTGFSSVCMRVYESVC 508
            K+AK +I R           K I VTR+MT+NNLQMG P++FQA+ GFSSVCM  +ES+ 
Sbjct: 578  KRAKAEISRAKAEEEKSKHEKSISVTRSMTMNNLQMGFPHVFQAMVGFSSVCMNAFESLY 637

Query: 507  NQTKDTDQCHDLKRLLP 457
            NQ K+ DQ HD+KRLLP
Sbjct: 638  NQAKNGDQEHDVKRLLP 654


>ref|XP_002327656.1| predicted protein [Populus trichocarpa] gi|222836741|gb|EEE75134.1|
            predicted protein [Populus trichocarpa]
          Length = 632

 Score =  357 bits (917), Expect = 3e-96
 Identities = 177/254 (69%), Positives = 206/254 (81%)
 Frame = -2

Query: 1227 MWRSVYECHQVQTHIVDQLKFLNTIPSTEPTSEIHRQSTLQLELEVQQWHLAFCDLVKAQ 1048
            MWR +YE HQVQTHIV QLK+LN IPSTEPTSEIHRQSTLQLELEVQQWH +FC++VKAQ
Sbjct: 373  MWRGMYESHQVQTHIVQQLKYLNAIPSTEPTSEIHRQSTLQLELEVQQWHHSFCNVVKAQ 432

Query: 1047 RDYMHSLTGWLRLSLFQFNNEQLTKTRHNSAIYSLCEEWQQALDRIPDKVASEGIKSFLT 868
            RDY+ SLTGWLRLSLFQF+   +++T   S IYSLCEEW  A+DRIPDKVASEGIKSF+T
Sbjct: 433  RDYIQSLTGWLRLSLFQFSKNPISRTSQESRIYSLCEEWNHAVDRIPDKVASEGIKSFIT 492

Query: 867  VIHAIVVQQADEHKQKKKSEATFKELEKKVVELRSLECKYGPYVVAESYGSRRNRNPVAE 688
            VIHAIVVQQA+EHKQKKKSE+ FKE EKKV ELR+LE KYGPY + E+  +   ++P+ E
Sbjct: 493  VIHAIVVQQAEEHKQKKKSESAFKEFEKKVAELRALESKYGPYSMPETSSTISIKDPLTE 552

Query: 687  KQAKVDILRXXXXXXXXXXXKLICVTRAMTLNNLQMGSPNLFQALTGFSSVCMRVYESVC 508
            K+AKV+ILR           KLI VTR+MT NNLQMG P+ FQA+ GFSSVCM V+ESV 
Sbjct: 553  KRAKVEILRARAEEEKSKHEKLISVTRSMTSNNLQMGFPHAFQAMVGFSSVCMNVFESVY 612

Query: 507  NQTKDTDQCHDLKR 466
            NQ K+ DQ HD+KR
Sbjct: 613  NQAKNADQEHDVKR 626


>emb|CAN62559.1| hypothetical protein VITISV_009207 [Vitis vinifera]
          Length = 627

 Score =  356 bits (914), Expect = 7e-96
 Identities = 178/260 (68%), Positives = 206/260 (79%)
 Frame = -2

Query: 1236 LRSMWRSVYECHQVQTHIVDQLKFLNTIPSTEPTSEIHRQSTLQLELEVQQWHLAFCDLV 1057
            L SMWRS+YECHQVQ HIV QLK+LN IPSTEPTSEIHRQSTLQLELEVQQWH  FC LV
Sbjct: 368  LMSMWRSMYECHQVQMHIVQQLKYLNAIPSTEPTSEIHRQSTLQLELEVQQWHSTFCSLV 427

Query: 1056 KAQRDYMHSLTGWLRLSLFQFNNEQLTKTRHNSAIYSLCEEWQQALDRIPDKVASEGIKS 877
            K QRDY+ +LTGWLRLSLFQF+   L+KTR  S IYSLCEEW  ALDR+PDKVASEGIKS
Sbjct: 428  KTQRDYIQALTGWLRLSLFQFSKNPLSKTRQESMIYSLCEEWHLALDRVPDKVASEGIKS 487

Query: 876  FLTVIHAIVVQQADEHKQKKKSEATFKELEKKVVELRSLECKYGPYVVAESYGSRRNRNP 697
             LTVIHAIVVQQADE KQKK+SE+ FK+LEKK+VELR+LECK  P+   ES    R+++P
Sbjct: 488  LLTVIHAIVVQQADEQKQKKRSESAFKDLEKKLVELRALECKQSPFSTPESSAITRSKDP 547

Query: 696  VAEKQAKVDILRXXXXXXXXXXXKLICVTRAMTLNNLQMGSPNLFQALTGFSSVCMRVYE 517
            +AEK+AKV  LR           K + VTR++TLNNLQMG P++FQA+TGF+SVC   +E
Sbjct: 548  IAEKRAKVAXLRAKAEEEKSKHEKAVSVTRSVTLNNLQMGFPHVFQAVTGFASVCTHAFE 607

Query: 516  SVCNQTKDTDQCHDLKRLLP 457
            SV NQ K  DQ  D+KR+LP
Sbjct: 608  SVHNQAKCMDQELDVKRILP 627


>ref|XP_003517165.1| PREDICTED: uncharacterized protein LOC100812451 [Glycine max]
          Length = 783

 Score =  356 bits (913), Expect = 9e-96
 Identities = 175/254 (68%), Positives = 203/254 (79%)
 Frame = -2

Query: 1236 LRSMWRSVYECHQVQTHIVDQLKFLNTIPSTEPTSEIHRQSTLQLELEVQQWHLAFCDLV 1057
            L  MWRS+YECHQVQ HIV QL++LNTIPS  PTSEIHRQSTLQLELEV+QWH +FC+L 
Sbjct: 366  LMCMWRSMYECHQVQKHIVQQLEYLNTIPSNNPTSEIHRQSTLQLELEVKQWHQSFCNLF 425

Query: 1056 KAQRDYMHSLTGWLRLSLFQFNNEQLTKTRHNSAIYSLCEEWQQALDRIPDKVASEGIKS 877
            KA RDY+ SLTGWLR +LFQF+   L++T   S IYSLCEEW  A+DRIPDKVASEGIKS
Sbjct: 426  KAHRDYIQSLTGWLRFTLFQFSKNPLSRTPEESKIYSLCEEWHLAVDRIPDKVASEGIKS 485

Query: 876  FLTVIHAIVVQQADEHKQKKKSEATFKELEKKVVELRSLECKYGPYVVAESYGSRRNRNP 697
             LTVIHAIVVQQA+E KQKK+S++ FKELEKKVV+LRSLECKYGPY + ESYGS R ++P
Sbjct: 486  LLTVIHAIVVQQAEEQKQKKRSDSAFKELEKKVVQLRSLECKYGPYSMPESYGSMRTKDP 545

Query: 696  VAEKQAKVDILRXXXXXXXXXXXKLICVTRAMTLNNLQMGSPNLFQALTGFSSVCMRVYE 517
            V EK+AKVD LR           K + VTRAMTLNNLQMG P++FQ + GFSSVCM V+E
Sbjct: 546  VTEKRAKVDALRAKAEEEKSKYEKSVSVTRAMTLNNLQMGCPHVFQGIVGFSSVCMEVFE 605

Query: 516  SVCNQTKDTDQCHD 475
            SV N+ K  +Q HD
Sbjct: 606  SVYNKAKAAEQEHD 619


Top