BLASTX nr result

ID: Coptis23_contig00000834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000834
         (986 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271306.1| PREDICTED: ferredoxin-thioredoxin reductase,...   129   1e-27
ref|XP_003524574.1| PREDICTED: ferredoxin-thioredoxin reductase,...   128   2e-27
gb|AFK46976.1| unknown [Lotus japonicus]                              125   1e-26
gb|AEY80143.1| lipoic acid synthase [Jatropha curcas]                 125   2e-26
ref|XP_002513160.1| lipoic acid synthetase, putative [Ricinus co...   125   2e-26

>ref|XP_002271306.1| PREDICTED: ferredoxin-thioredoxin reductase, variable chain,
           chloroplastic [Vitis vinifera]
           gi|147820518|emb|CAN76575.1| hypothetical protein
           VITISV_024425 [Vitis vinifera]
          Length = 168

 Score =  129 bits (324), Expect = 1e-27
 Identities = 67/109 (61%), Positives = 78/109 (71%), Gaps = 10/109 (9%)
 Frame = -3

Query: 633 CEVALKADSPXXXXXXXXXS----------KIGARVRVKVPLKVYHVPKVPELDLSGMEG 484
           CEVAL++DS                     KIGARVRVKVPLKV+HVP+VPE+DL+GMEG
Sbjct: 58  CEVALRSDSATSSSSAAFEQVQEDAAEEAGKIGARVRVKVPLKVFHVPRVPEVDLTGMEG 117

Query: 483 ELKQYVGFWKGKHISANLPFKVQFFAQVPDRDGPVKFLAHLKEDEFDYL 337
            LKQYVG WKGK ISANLPFK+ F A +  R GPVKF AHLK+DEF+Y+
Sbjct: 118 VLKQYVGVWKGKRISANLPFKIGFVADIEGR-GPVKFFAHLKDDEFEYV 165


>ref|XP_003524574.1| PREDICTED: ferredoxin-thioredoxin reductase, variable chain-like
           [Glycine max]
          Length = 145

 Score =  128 bits (321), Expect = 2e-27
 Identities = 66/99 (66%), Positives = 74/99 (74%)
 Frame = -3

Query: 633 CEVALKADSPXXXXXXXXXSKIGARVRVKVPLKVYHVPKVPELDLSGMEGELKQYVGFWK 454
           CEVA+ A            SKIGARV+VK  +KVYHVPKV ELDL+G+EGE+KQYVG W 
Sbjct: 51  CEVAINA---VDESTTSPESKIGARVKVKAGVKVYHVPKVAELDLTGLEGEIKQYVGLWN 107

Query: 453 GKHISANLPFKVQFFAQVPDRDGPVKFLAHLKEDEFDYL 337
           GK ISANLP+KVQF   +P R GPVKF AHLKEDEFDYL
Sbjct: 108 GKRISANLPYKVQFLTDIPAR-GPVKFFAHLKEDEFDYL 145


>gb|AFK46976.1| unknown [Lotus japonicus]
          Length = 166

 Score =  125 bits (315), Expect = 1e-26
 Identities = 64/104 (61%), Positives = 73/104 (70%), Gaps = 5/104 (4%)
 Frame = -3

Query: 633 CEVALKADSPXXXXXXXXXS-----KIGARVRVKVPLKVYHVPKVPELDLSGMEGELKQY 469
           CEVA++  SP               K+GARVRVKVPLKVYHVPKVPE DL G EGE+KQY
Sbjct: 64  CEVAVEESSPSSTSSSSESEEAESSKVGARVRVKVPLKVYHVPKVPEFDLEGAEGEIKQY 123

Query: 468 VGFWKGKHISANLPFKVQFFAQVPDRDGPVKFLAHLKEDEFDYL 337
           V  WKGK ISAN P+KVQF  ++  R G VKF AHLKEDEF++L
Sbjct: 124 VALWKGKKISANFPYKVQFVTEIEGR-GAVKFFAHLKEDEFEFL 166


>gb|AEY80143.1| lipoic acid synthase [Jatropha curcas]
          Length = 201

 Score =  125 bits (314), Expect = 2e-26
 Identities = 60/79 (75%), Positives = 67/79 (84%)
 Frame = -3

Query: 573 KIGARVRVKVPLKVYHVPKVPELDLSGMEGELKQYVGFWKGKHISANLPFKVQFFAQVPD 394
           KIGARVRVKVPLKVYHVP+VPE+DL+G EG LKQYV  WKGK ISANLP+KV+F   +  
Sbjct: 123 KIGARVRVKVPLKVYHVPRVPEVDLTGKEGNLKQYVALWKGKRISANLPYKVEFTMDIEG 182

Query: 393 RDGPVKFLAHLKEDEFDYL 337
           R GPVKF AHLKEDEF+YL
Sbjct: 183 R-GPVKFFAHLKEDEFEYL 200


>ref|XP_002513160.1| lipoic acid synthetase, putative [Ricinus communis]
           gi|223548171|gb|EEF49663.1| lipoic acid synthetase,
           putative [Ricinus communis]
          Length = 184

 Score =  125 bits (314), Expect = 2e-26
 Identities = 59/79 (74%), Positives = 67/79 (84%)
 Frame = -3

Query: 573 KIGARVRVKVPLKVYHVPKVPELDLSGMEGELKQYVGFWKGKHISANLPFKVQFFAQVPD 394
           KIGARV+VKVPLKVYHVP+VPE+DL+G EG LKQYV  WKGK ISANLP+KV+F   +  
Sbjct: 106 KIGARVKVKVPLKVYHVPRVPEVDLTGKEGHLKQYVALWKGKRISANLPYKVEFLVDIEG 165

Query: 393 RDGPVKFLAHLKEDEFDYL 337
           R GPVKF AHLKEDEFD+L
Sbjct: 166 R-GPVKFFAHLKEDEFDFL 183


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