BLASTX nr result

ID: Coptis23_contig00000815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000815
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282694.1| PREDICTED: probable cytosolic iron-sulfur pr...    83   3e-14
ref|XP_002528743.1| WD-repeat protein, putative [Ricinus communi...    82   5e-14
ref|XP_003625815.1| hypothetical protein MTR_7g104550 [Medicago ...    75   7e-12
gb|ABK25132.1| unknown [Picea sitchensis]                              73   3e-11
ref|XP_003561272.1| PREDICTED: LOW QUALITY PROTEIN: probable cyt...    72   5e-11

>ref|XP_002282694.1| PREDICTED: probable cytosolic iron-sulfur protein assembly protein
           [Vitis vinifera] gi|297740110|emb|CBI30292.3| unnamed
           protein product [Vitis vinifera]
          Length = 344

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 37/45 (82%), Positives = 43/45 (95%)
 Frame = -1

Query: 418 YKMLLKKEKAHDMDVNAVQWSSKENRLLASASDDGTIKIWELTSL 284
           YK++LKKE+AHDMD+N+VQWSS ENRLLASASDDGTIKIWEL S+
Sbjct: 299 YKLMLKKEQAHDMDINSVQWSSGENRLLASASDDGTIKIWELASI 343


>ref|XP_002528743.1| WD-repeat protein, putative [Ricinus communis]
           gi|223531837|gb|EEF33655.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 349

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -1

Query: 421 SYKMLLKKEKAHDMDVNAVQWSSKENRLLASASDDGTIKIWELTSL 284
           SY++LLKKEKAHDMD+N+VQW+  ENRLLASASDDGTIKIWEL +L
Sbjct: 303 SYRLLLKKEKAHDMDINSVQWAPGENRLLASASDDGTIKIWELATL 348


>ref|XP_003625815.1| hypothetical protein MTR_7g104550 [Medicago truncatula]
           gi|355500830|gb|AES82033.1| hypothetical protein
           MTR_7g104550 [Medicago truncatula]
          Length = 344

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -1

Query: 418 YKMLLKKEKAHDMDVNAVQWSSKENRLLASASDDGTIKIWELTS 287
           YK+LLKKEKAHDMD+N VQWS  E  LLASASDDGTIK+W+L S
Sbjct: 301 YKLLLKKEKAHDMDINYVQWSHGEKPLLASASDDGTIKVWDLVS 344


>gb|ABK25132.1| unknown [Picea sitchensis]
          Length = 368

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/46 (71%), Positives = 39/46 (84%)
 Frame = -1

Query: 421 SYKMLLKKEKAHDMDVNAVQWSSKENRLLASASDDGTIKIWELTSL 284
           SYK++LKKEKAH MDVN+VQW   E +LLASASDDG IKIWE+T +
Sbjct: 316 SYKLILKKEKAHSMDVNSVQWHPSEPQLLASASDDGRIKIWEVTRI 361


>ref|XP_003561272.1| PREDICTED: LOW QUALITY PROTEIN: probable cytosolic iron-sulfur
           protein assembly protein-like [Brachypodium distachyon]
          Length = 368

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 30/43 (69%), Positives = 39/43 (90%)
 Frame = -1

Query: 421 SYKMLLKKEKAHDMDVNAVQWSSKENRLLASASDDGTIKIWEL 293
           SY+++LKKEKAHDMDVN V+W  ++ R+LASASDDGT+K+WEL
Sbjct: 320 SYRLILKKEKAHDMDVNCVRWCPQDPRMLASASDDGTVKLWEL 362


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