BLASTX nr result

ID: Coptis23_contig00000813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000813
         (2201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517116.1| conserved hypothetical protein [Ricinus comm...   308   5e-81
ref|XP_002314686.1| predicted protein [Populus trichocarpa] gi|2...   298   5e-78
ref|XP_002282784.1| PREDICTED: uncharacterized protein LOC100245...   289   2e-75
ref|XP_002337586.1| predicted protein [Populus trichocarpa] gi|2...   258   6e-66
ref|XP_004139816.1| PREDICTED: uncharacterized protein LOC101210...   256   1e-65

>ref|XP_002517116.1| conserved hypothetical protein [Ricinus communis]
            gi|223543751|gb|EEF45279.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 319

 Score =  308 bits (788), Expect = 5e-81
 Identities = 183/330 (55%), Positives = 215/330 (65%), Gaps = 3/330 (0%)
 Frame = +3

Query: 843  MLRKRSRGVNSKQDLMADSPYLLSPNNKHSKPGSSLFNSPMLFTGLTTKAFSET-EDLIS 1019
            M+RKRSR  +SKQ LMAD   +LSP  K+ KP S     P LFTG + K FSET E ++S
Sbjct: 1    MIRKRSRVSSSKQVLMADYSSILSPTEKYRKPTSF----PRLFTGFSFKNFSETTESVMS 56

Query: 1020 PTSTLDAMLFSGLPNPFWTDKNSPVKSSQESLLDKKHPWVKKLDSRGVGLGIVDALN-DE 1196
            PTS LD+  FSG  NPF  D+N   K+ QES  D K  W  KLDS+G+GL IVDALN D+
Sbjct: 57   PTSILDSKPFSGFRNPFLPDQNLTPKT-QES--DTKRTW-DKLDSKGIGLAIVDALNYDD 112

Query: 1197 GSDKKLSKPDSRMVLFGSQLKXXXXXXXXXXXXETEYLQSPADFGIKTRNTQLEXXXXXX 1376
             +D  LSKP+SRMVLFGSQLK            ++   +SPADFGIKTR++QL       
Sbjct: 113  KTDSNLSKPESRMVLFGSQLKIQVPPLPVSPTDQSP--KSPADFGIKTRHSQLGSSSSGL 170

Query: 1377 XXXXXXXXXXXXXXEYFNSGIGGSPRVFSGRLSASVMESSEEYTCVITRGPNPKTTHIFD 1556
                             ++    SP VF+G LSA  ME SE+YTCVI+ GPNPKTTHIFD
Sbjct: 171  SHSPVKKSVCGSANSSIDTS--SSPGVFNGSLSAIEMEQSEDYTCVISYGPNPKTTHIFD 228

Query: 1557 DCIVEDCCGVVGFS-SLGKENSFLSDQVSYPSDDFLSFCYTCNKHLGQGKDIYIYRGEKA 1733
            D IVE CC VV FS S  + N FL D  SYPSD+FLSFCY C K+LGQGKDIY+YRGEKA
Sbjct: 229  DYIVESCCDVVEFSTSRTQTNGFLGDGSSYPSDNFLSFCYACKKNLGQGKDIYMYRGEKA 288

Query: 1734 FCSHECRYQEILLEEGMEKSDLEDIAKNCS 1823
            FCS ECRYQE+L EEG++K D ED    CS
Sbjct: 289  FCSSECRYQEMLSEEGIDKLDHEDGYGTCS 318


>ref|XP_002314686.1| predicted protein [Populus trichocarpa] gi|222863726|gb|EEF00857.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  298 bits (762), Expect = 5e-78
 Identities = 175/326 (53%), Positives = 210/326 (64%), Gaps = 8/326 (2%)
 Frame = +3

Query: 843  MLRKRSRGVNSKQDLMADSPYLLSPNNKHSKPGSSLFNSPMLFTGLTTKAFSET-EDLIS 1019
            M++KRSR   SKQ LM+    + SP +K  KP S     P L TGLT K FSET E ++S
Sbjct: 1    MMKKRSRTATSKQALMSQHSSIPSPTDKFRKPTSF----PKLLTGLTFKNFSETAEAIMS 56

Query: 1020 PTSTLDAMLFSGLPNPFWTDKNSPVKSSQESLLDKKHPWVKKLDSRGVGLGIVDALNDEG 1199
            PTS LD+  FSGL NPFW D     K+ +    D +  W  KLDS+G+GLGIVDAL+DE 
Sbjct: 57   PTSILDSKPFSGLKNPFWHDACPSPKTPEP---DTRRHW-DKLDSKGIGLGIVDALDDEE 112

Query: 1200 SDKKLSKPDSRMVLFGSQLKXXXXXXXXXXXXETEYLQSP---ADFGIKTRNTQLEXXXX 1370
            +D  LSKP+SRMVLFGSQLK             T+  QSP    DFGIKTRN+Q      
Sbjct: 113  TDSNLSKPESRMVLFGSQLKIQIPPLPPPFLSPTD--QSPKLNGDFGIKTRNSQFGSFSS 170

Query: 1371 XXXXXXXXXXXXXXXXEYFNSGIG--GSPRVFSGRLSASVMESSEEYTCVITRGPNPKTT 1544
                               NSG+    SPRVF+G LSAS ME SE+YTCVIT GP PKTT
Sbjct: 171  GLSPSPVKKSLFGSA----NSGMDTPNSPRVFTGCLSASEMELSEDYTCVITHGPVPKTT 226

Query: 1545 HIFDDCIVEDCCGVVGFSSLGKE--NSFLSDQVSYPSDDFLSFCYTCNKHLGQGKDIYIY 1718
            HIFD+CIVE CCG VGFS+  ++  N FL D ++Y SD FLSFC +C K+L QGKDIYIY
Sbjct: 227  HIFDNCIVESCCGAVGFSASSRKDNNRFLGDGLTYRSDSFLSFCSSCKKNLEQGKDIYIY 286

Query: 1719 RGEKAFCSHECRYQEILLEEGMEKSD 1796
            RGE+AFCS+ECRYQ +LLEEG+++ D
Sbjct: 287  RGERAFCSNECRYQVMLLEEGIDEVD 312


>ref|XP_002282784.1| PREDICTED: uncharacterized protein LOC100245904 [Vitis vinifera]
          Length = 307

 Score =  289 bits (739), Expect = 2e-75
 Identities = 171/330 (51%), Positives = 209/330 (63%), Gaps = 3/330 (0%)
 Frame = +3

Query: 843  MLRKRSRGVNSKQDLMADSPYLLSPNNKHSKP-GSSLFNSPMLFTGLTTKAFSETEDLIS 1019
            MLRKRSR   SKQ LMAD   L SP +K+ +P  SS F+SP LFTG ++K FSETE ++S
Sbjct: 1    MLRKRSRASTSKQALMADCGSLPSPTDKYRRPPSSSFFSSPRLFTGFSSKVFSETETMMS 60

Query: 1020 PTSTLDAMLFSGLPNPFWTDKNSPVKSSQESLLDKKHPWVKKLDSRGVGLGIVDALNDEG 1199
            PTS LD+  FSG  NPF T+  S +K S+    + +  W  KLDSR +GLGIVDAL  + 
Sbjct: 61   PTSILDSKPFSGFRNPF-TNTTSTIKPSEP---EPRRHW-DKLDSRMIGLGIVDALTHDE 115

Query: 1200 SDKKLSKPDSRMVLFGSQLKXXXXXXXXXXXXETEYLQSPADFGIKTRNTQLEXXXXXXX 1379
            SD KLSKP+SRMVLFGSQLK              E  +SPADFGIKTRN+QL        
Sbjct: 116  SDPKLSKPESRMVLFGSQLKIQIPPLPSSVLSPAESPKSPADFGIKTRNSQLGPFSPCLS 175

Query: 1380 XXXXXXXXXXXXXEYFNSGI--GGSPRVFSGRLSASVMESSEEYTCVITRGPNPKTTHIF 1553
                            NSG+    SPR+F+G LSA+ ME SE+YTCVI+ GPNP+TTHIF
Sbjct: 176  QSPAKKSGFGSA----NSGLEAPNSPRIFTGCLSATEMELSEDYTCVISHGPNPRTTHIF 231

Query: 1554 DDCIVEDCCGVVGFSSLGKENSFLSDQVSYPSDDFLSFCYTCNKHLGQGKDIYIYRGEKA 1733
            D+CI       VGFS+  KEN           + FL+FC++C K++GQGKDIYIYRGEKA
Sbjct: 232  DNCI-------VGFSASRKENDVF-------PESFLNFCHSCRKNIGQGKDIYIYRGEKA 277

Query: 1734 FCSHECRYQEILLEEGMEKSDLEDIAKNCS 1823
            FCS ECR +EI+LEE ME  +  D+   CS
Sbjct: 278  FCSSECRQREIMLEERMEILEGGDVYGTCS 307


>ref|XP_002337586.1| predicted protein [Populus trichocarpa] gi|222839623|gb|EEE77946.1|
            predicted protein [Populus trichocarpa]
          Length = 260

 Score =  258 bits (658), Expect = 6e-66
 Identities = 150/301 (49%), Positives = 185/301 (61%), Gaps = 4/301 (1%)
 Frame = +3

Query: 888  MADSPYLLSPNNKHSKPGSSLFNSPMLFTGLTTKAFSET-EDLISPTSTLDAMLFSGLPN 1064
            M+    + SP +K  KP S     P L T  T K FSET E ++SPTS LD+  FSGL N
Sbjct: 1    MSQHSSIPSPTDKFRKPTSF----PKLLTAFTFKNFSETSEAIMSPTSILDSKPFSGLKN 56

Query: 1065 PFWTDKNSPVKSSQESLLDKKHPWVKKLDSRGVGLGIVDALNDEGSDKKLSKPDSRMVLF 1244
            PFW D N   K+ +    + +  W  KLD++G+GLGIVDAL+DE +D  LSKP+SR VLF
Sbjct: 57   PFWPDPNPSPKTPEP---ETRRHW-DKLDAKGIGLGIVDALDDEKTDSNLSKPESRTVLF 112

Query: 1245 GSQLKXXXXXXXXXXXXETEYL-QSPADFGIKTRNTQLEXXXXXXXXXXXXXXXXXXXXE 1421
            GSQLK             T+   +SPA+ G++T N                         
Sbjct: 113  GSQLKIQIPPFPPSFLSTTDQSPKSPANSGMETPN------------------------- 147

Query: 1422 YFNSGIGGSPRVFSGRLSASVMESSEEYTCVITRGPNPKTTHIFDDCIVEDCCGVVGFSS 1601
                    SPRVF+G LSAS ME SE+YTCVIT GP P+TTHIFD+CIVE CCG VGFS+
Sbjct: 148  --------SPRVFAGCLSASEMELSEDYTCVITHGPVPRTTHIFDNCIVESCCGAVGFSA 199

Query: 1602 LGKE--NSFLSDQVSYPSDDFLSFCYTCNKHLGQGKDIYIYRGEKAFCSHECRYQEILLE 1775
              ++  N FL D ++Y SD FLSFC +C K+L QGKDIYIYRGE+AFCS+ECRYQ +LLE
Sbjct: 200  SSRKDNNRFLGDGLTYRSDSFLSFCSSCKKNLEQGKDIYIYRGERAFCSNECRYQVMLLE 259

Query: 1776 E 1778
            E
Sbjct: 260  E 260


>ref|XP_004139816.1| PREDICTED: uncharacterized protein LOC101210425 [Cucumis sativus]
            gi|449492592|ref|XP_004159042.1| PREDICTED:
            uncharacterized LOC101210425 [Cucumis sativus]
          Length = 294

 Score =  256 bits (655), Expect = 1e-65
 Identities = 145/300 (48%), Positives = 179/300 (59%), Gaps = 5/300 (1%)
 Frame = +3

Query: 906  LLSPNNKHSKPGSSLFNSPMLFTGLTTKAFSETEDLISPTSTLDAMLFSGLPNPFWTDKN 1085
            L SP +   K  SS F SP LFT  ++K  SETE ++SPTS L+  L  GL N FW + N
Sbjct: 13   LPSPTSNSRKLSSSFFGSPRLFTSSSSKGLSETEAVMSPTSILEPFL--GLRNSFWGESN 70

Query: 1086 SPVKSSQESLLDKKHPWVKKLDSRGVGLGIVDALNDEGSDKKLSKPDSRMVLFGSQLKXX 1265
            SP    +  L + K PW    DS+G+GL IVD L +E SD K SKPD+RMV+ GSQLK  
Sbjct: 71   SP----RTQLTESKRPW----DSKGIGLAIVDGLTEENSDPKPSKPDTRMVVLGSQLKIQ 122

Query: 1266 XXXXXXXXXXETEYLQSPADFGIKTRNTQLEXXXXXXXXXXXXXXXXXXXXEYFNSGIGG 1445
                        +   SP +FGIKTRN+ L                       F S   G
Sbjct: 123  IPPLPPFVSPTDDSPVSPIEFGIKTRNSHL-------GSLSPVSSLSPAKKSAFGSSSSG 175

Query: 1446 -----SPRVFSGRLSASVMESSEEYTCVITRGPNPKTTHIFDDCIVEDCCGVVGFSSLGK 1610
                 SP VF+G LSA  +E SE+YTCVI+ GPNPKTTHIF DC++E  CGV  +S + K
Sbjct: 176  QETPNSPLVFTGCLSAGEIEQSEDYTCVISHGPNPKTTHIFGDCVIESGCGV--YSPVRK 233

Query: 1611 ENSFLSDQVSYPSDDFLSFCYTCNKHLGQGKDIYIYRGEKAFCSHECRYQEILLEEGMEK 1790
            EN F  D+ S+  ++FLSFC  C K+L QGKDIY+YRGEKAFCS ECRYQE++LEE  E+
Sbjct: 234  ENGFFRDRTSFSPENFLSFCNNCKKNLEQGKDIYMYRGEKAFCSDECRYQEMMLEEEEEE 293


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