BLASTX nr result

ID: Coptis23_contig00000805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000805
         (1289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60346.1| hypothetical protein VITISV_001795 [Vitis vinifera]   564   e-158
ref|XP_002263615.2| PREDICTED: LOW QUALITY PROTEIN: probable pec...   561   e-157
ref|XP_004153041.1| PREDICTED: putative pectate lyase 2-like [Cu...   553   e-155
ref|XP_002518441.1| Pectate lyase precursor, putative [Ricinus c...   551   e-154
ref|XP_004145189.1| PREDICTED: putative pectate lyase 2-like [Cu...   551   e-154

>emb|CAN60346.1| hypothetical protein VITISV_001795 [Vitis vinifera]
          Length = 397

 Score =  564 bits (1453), Expect = e-158
 Identities = 267/384 (69%), Positives = 314/384 (81%), Gaps = 8/384 (2%)
 Frame = +2

Query: 11   LAFLASTFHAHPVY----KTYNT-VPTNVQ---KQTMNQIDSCWRSNPDWVSNRRDLADC 166
            LA+ AST  A+       +T+ + +P++ +   K+ MN IDSCWR   +W SNRR LADC
Sbjct: 14   LAYYASTLQAYSSLDYTPQTFTSYMPSSSKSSTKKVMNPIDSCWRRKANWASNRRALADC 73

Query: 167  PIGFGNAGIGGKYGAIYEVTDPSDNPIIPKPGTLRYGVIQEKPLWIVFSKDMVITLENEL 346
             +GFG   +GGKYGA+Y VT PSD+P+ PKPGTLRYGVIQ KPLWIVF+KDMVITL+NEL
Sbjct: 74   AVGFGKGAMGGKYGAMYVVTTPSDDPVNPKPGTLRYGVIQTKPLWIVFAKDMVITLKNEL 133

Query: 347  IMSSFKTIDGRGAKVEIANGPCITIQEVSHIIIHGINIHDCKPSKGGLVRSNTTHIGHRL 526
            IM+SFKTIDGRGAKVEIA GPCITIQ VSH+IIHGI+IHDCKP K GLVRS T H+GHRL
Sbjct: 134  IMNSFKTIDGRGAKVEIAYGPCITIQGVSHVIIHGISIHDCKPGKSGLVRSTTMHVGHRL 193

Query: 527  PSDGDGITIFASNNIWIDHCFLARCTDGLVDVTHASTDVTISNNFFTQHDKVMLLGHDDA 706
             SDGD I+IF S+++WIDHC+LA CTDGL+DV HAST +TISNN+F+ HDKVML GHDD 
Sbjct: 194  GSDGDAISIFTSSHVWIDHCYLASCTDGLIDVIHASTAITISNNYFSHHDKVMLFGHDDH 253

Query: 707  FTADKLMRVTVVFNYFGPDLVQRMPRVRLGYAHVANNRYEEWMMYAIGGSANPTILSEGN 886
            FTADK+M VTV FN+FG  LVQRMPRVR GYAH+ANN+Y+EW MYAIGGSANPTILSEGN
Sbjct: 254  FTADKVMSVTVAFNHFGTGLVQRMPRVRFGYAHLANNKYDEWEMYAIGGSANPTILSEGN 313

Query: 887  YFNAPTNPYFKQVTKRDTDGMWKNWKWRSSKDVFDNGAYFVQSGWGSCPPLYSEVQSFTV 1066
            +F AP N   K+VTKR+    WKNWKWRSSKD F NGAYFVQSGWGSC PLYS  Q+F+V
Sbjct: 314  HFTAPDNANTKEVTKREVKSGWKNWKWRSSKDKFVNGAYFVQSGWGSCAPLYSRSQAFSV 373

Query: 1067 SEGSLVPALTAETGPLLCTAGYTC 1138
            ++GS+VPALT++ GPL C+AG  C
Sbjct: 374  ADGSMVPALTSDAGPLGCSAGKPC 397


>ref|XP_002263615.2| PREDICTED: LOW QUALITY PROTEIN: probable pectate lyase 16 [Vitis
            vinifera]
          Length = 397

 Score =  561 bits (1447), Expect = e-157
 Identities = 266/384 (69%), Positives = 313/384 (81%), Gaps = 8/384 (2%)
 Frame = +2

Query: 11   LAFLASTFHAHPVY----KTYNT-VPTNVQ---KQTMNQIDSCWRSNPDWVSNRRDLADC 166
            LA+ AST  A+       +T+ + +P++ +   K+ MN IDSCWR   +W SNRR LADC
Sbjct: 14   LAYYASTLQAYSSLDYTPQTFTSYMPSSSKSSTKKVMNPIDSCWRRKANWASNRRALADC 73

Query: 167  PIGFGNAGIGGKYGAIYEVTDPSDNPIIPKPGTLRYGVIQEKPLWIVFSKDMVITLENEL 346
             +GFG   +GGKYGA+Y VT PSD+P+ PKPGTLRYGVIQ KPLWIVF+KDMVITL+NEL
Sbjct: 74   AVGFGKGAMGGKYGAMYVVTTPSDDPVNPKPGTLRYGVIQTKPLWIVFAKDMVITLKNEL 133

Query: 347  IMSSFKTIDGRGAKVEIANGPCITIQEVSHIIIHGINIHDCKPSKGGLVRSNTTHIGHRL 526
            IM+SFKTIDGRGAKVEIA GPCITIQ VSH+IIHGI+IHDCKP K GLVRS T H+GHRL
Sbjct: 134  IMNSFKTIDGRGAKVEIAYGPCITIQGVSHVIIHGISIHDCKPGKSGLVRSTTMHVGHRL 193

Query: 527  PSDGDGITIFASNNIWIDHCFLARCTDGLVDVTHASTDVTISNNFFTQHDKVMLLGHDDA 706
             SDGD I+IF S+++WIDHC+LA CTDGL+DV HAST +TISNN+F+ HDKVML GHDD 
Sbjct: 194  GSDGDAISIFTSSHVWIDHCYLASCTDGLIDVIHASTAITISNNYFSHHDKVMLFGHDDH 253

Query: 707  FTADKLMRVTVVFNYFGPDLVQRMPRVRLGYAHVANNRYEEWMMYAIGGSANPTILSEGN 886
            FTADK+M VTV FN+FG  LVQRMPRVR GYAH+ANN+Y+EW MYAIGGSANPTILSEGN
Sbjct: 254  FTADKVMSVTVAFNHFGTGLVQRMPRVRFGYAHLANNKYDEWEMYAIGGSANPTILSEGN 313

Query: 887  YFNAPTNPYFKQVTKRDTDGMWKNWKWRSSKDVFDNGAYFVQSGWGSCPPLYSEVQSFTV 1066
            +F AP N   K+VTKR+    WKNWKWRSSKD F NGAYFV SGWGSC PLYS  Q+F+V
Sbjct: 314  HFTAPDNANTKEVTKREVKSGWKNWKWRSSKDKFVNGAYFVXSGWGSCAPLYSRSQAFSV 373

Query: 1067 SEGSLVPALTAETGPLLCTAGYTC 1138
            ++GS+VPALT++ GPL C+AG  C
Sbjct: 374  ADGSMVPALTSDAGPLGCSAGKPC 397


>ref|XP_004153041.1| PREDICTED: putative pectate lyase 2-like [Cucumis sativus]
          Length = 381

 Score =  553 bits (1424), Expect = e-155
 Identities = 253/352 (71%), Positives = 291/352 (82%)
 Frame = +2

Query: 83   QKQTMNQIDSCWRSNPDWVSNRRDLADCPIGFGNAGIGGKYGAIYEVTDPSDNPIIPKPG 262
            QK+ MN IDSCWR   +W  NR+ LADC +G+G   IGGK+G IY VTDPSDNP  PK G
Sbjct: 30   QKKNMNVIDSCWRQTSNWAKNRKALADCAVGYGKDAIGGKFGTIYTVTDPSDNPSNPKYG 89

Query: 263  TLRYGVIQEKPLWIVFSKDMVITLENELIMSSFKTIDGRGAKVEIANGPCITIQEVSHII 442
            TLRYGVIQ+KPLWIVF KDMVI L+NEL+++SFKTIDGRGAKVEIA GPCIT+Q VSH+I
Sbjct: 90   TLRYGVIQDKPLWIVFGKDMVIVLKNELMVNSFKTIDGRGAKVEIAYGPCITVQGVSHVI 149

Query: 443  IHGINIHDCKPSKGGLVRSNTTHIGHRLPSDGDGITIFASNNIWIDHCFLARCTDGLVDV 622
            IHGI+IHDCKP K GLVR   +HIG R  SDGD I +F S+++WIDHC+LARCTDGL+DV
Sbjct: 150  IHGISIHDCKPGKAGLVRDTVSHIGKRKGSDGDAIAVFGSSHVWIDHCYLARCTDGLIDV 209

Query: 623  THASTDVTISNNFFTQHDKVMLLGHDDAFTADKLMRVTVVFNYFGPDLVQRMPRVRLGYA 802
             HAST VTISNN+F+QHDKVMLLGH+D FT DK+MRVT+VFN FG  L++RMPRVR GYA
Sbjct: 210  IHASTSVTISNNYFSQHDKVMLLGHNDGFTDDKIMRVTIVFNRFGAGLIERMPRVRFGYA 269

Query: 803  HVANNRYEEWMMYAIGGSANPTILSEGNYFNAPTNPYFKQVTKRDTDGMWKNWKWRSSKD 982
            HVANNRY+EW MYAIGGSANPTI SEGNYF AP N Y KQVTKR+ +  WKNWKWRSS+D
Sbjct: 270  HVANNRYDEWKMYAIGGSANPTIFSEGNYFVAPQNSYAKQVTKREVNNGWKNWKWRSSRD 329

Query: 983  VFDNGAYFVQSGWGSCPPLYSEVQSFTVSEGSLVPALTAETGPLLCTAGYTC 1138
            VF NGAYFV SGWGSC P+Y++ QSF V+ GS+VPALTA +GPL C  G  C
Sbjct: 330  VFLNGAYFVPSGWGSCSPIYTKAQSFPVAPGSMVPALTANSGPLRCFIGKAC 381


>ref|XP_002518441.1| Pectate lyase precursor, putative [Ricinus communis]
            gi|223542286|gb|EEF43828.1| Pectate lyase precursor,
            putative [Ricinus communis]
          Length = 377

 Score =  551 bits (1421), Expect = e-154
 Identities = 254/357 (71%), Positives = 302/357 (84%)
 Frame = +2

Query: 68   VPTNVQKQTMNQIDSCWRSNPDWVSNRRDLADCPIGFGNAGIGGKYGAIYEVTDPSDNPI 247
            +PTN +    N IDSCWR+  +W SNR+ LADC +GFG A +GGK G IY VT P D+P+
Sbjct: 22   LPTNTET-VFNTIDSCWRTESNWASNRQALADCAVGFGKATLGGKDGDIYVVTTPDDDPV 80

Query: 248  IPKPGTLRYGVIQEKPLWIVFSKDMVITLENELIMSSFKTIDGRGAKVEIANGPCITIQE 427
             PKPGTLRYGVIQ +PLWI+F +DMVITLENEL+++SFKTIDGRG+K+EIA+GPC+TI+ 
Sbjct: 81   DPKPGTLRYGVIQTEPLWIIFDQDMVITLENELMVNSFKTIDGRGSKIEIADGPCMTIEG 140

Query: 428  VSHIIIHGINIHDCKPSKGGLVRSNTTHIGHRLPSDGDGITIFASNNIWIDHCFLARCTD 607
            VSH+IIHGI+IHDCKPSK GLVRS+ +H+G R  SDGDGI +FAS+NIWIDHC+LARCTD
Sbjct: 141  VSHVIIHGISIHDCKPSKRGLVRSSASHVGERRGSDGDGIVVFASSNIWIDHCYLARCTD 200

Query: 608  GLVDVTHASTDVTISNNFFTQHDKVMLLGHDDAFTADKLMRVTVVFNYFGPDLVQRMPRV 787
            GL+DV HAST VTISNN+F+QHDKVMLLGH+D ++AD++M+VTVV N+FGP LVQRMPRV
Sbjct: 201  GLLDVIHASTAVTISNNYFSQHDKVMLLGHNDEYSADEVMKVTVVLNHFGPGLVQRMPRV 260

Query: 788  RLGYAHVANNRYEEWMMYAIGGSANPTILSEGNYFNAPTNPYFKQVTKRDTDGMWKNWKW 967
            R GYAHVANNRYEEW MYAIGGSANPTI SE NYF AP +P  KQVTKR+  G WKNWKW
Sbjct: 261  RYGYAHVANNRYEEWEMYAIGGSANPTIFSECNYFMAPNDPNIKQVTKREVPGGWKNWKW 320

Query: 968  RSSKDVFDNGAYFVQSGWGSCPPLYSEVQSFTVSEGSLVPALTAETGPLLCTAGYTC 1138
            RSS+D+F NGAYFVQSG+GSC P YS  QSFTV+ G+LVPALT++ GPL C+ G  C
Sbjct: 321  RSSRDIFMNGAYFVQSGYGSCAPRYSRDQSFTVAPGTLVPALTSDAGPLTCSVGKAC 377


>ref|XP_004145189.1| PREDICTED: putative pectate lyase 2-like [Cucumis sativus]
          Length = 622

 Score =  551 bits (1420), Expect = e-154
 Identities = 253/353 (71%), Positives = 291/353 (82%)
 Frame = +2

Query: 80   VQKQTMNQIDSCWRSNPDWVSNRRDLADCPIGFGNAGIGGKYGAIYEVTDPSDNPIIPKP 259
            V  +TMN IDSCWR   +W  NR+ LADC +G+G   IGGK+G IY VTDPSDNP  PK 
Sbjct: 270  VSCRTMNVIDSCWRQTSNWAKNRKALADCAVGYGKDAIGGKFGTIYTVTDPSDNPSNPKY 329

Query: 260  GTLRYGVIQEKPLWIVFSKDMVITLENELIMSSFKTIDGRGAKVEIANGPCITIQEVSHI 439
            GTLRYGVIQ+KPLWIVF KDMVI L+NEL+++SFKTIDGRGAKVEIA GPCIT+Q VSH+
Sbjct: 330  GTLRYGVIQDKPLWIVFGKDMVIVLKNELMVNSFKTIDGRGAKVEIAYGPCITVQGVSHV 389

Query: 440  IIHGINIHDCKPSKGGLVRSNTTHIGHRLPSDGDGITIFASNNIWIDHCFLARCTDGLVD 619
            IIHGI+IHDCKP K GLVR   +HIG R  SDGD I +F S+++WIDHC+LARCTDGL+D
Sbjct: 390  IIHGISIHDCKPGKAGLVRDTVSHIGKRKGSDGDAIAVFGSSHVWIDHCYLARCTDGLID 449

Query: 620  VTHASTDVTISNNFFTQHDKVMLLGHDDAFTADKLMRVTVVFNYFGPDLVQRMPRVRLGY 799
            V HAST VTISNN+F+QHDKVMLLGH+D FT DK+MRVT+VFN FG  L++RMPRVR GY
Sbjct: 450  VIHASTSVTISNNYFSQHDKVMLLGHNDGFTDDKIMRVTIVFNRFGAGLIERMPRVRFGY 509

Query: 800  AHVANNRYEEWMMYAIGGSANPTILSEGNYFNAPTNPYFKQVTKRDTDGMWKNWKWRSSK 979
            AHVANNRY+EW MYAIGGSANPTI SEGNYF AP N Y KQVTKR+ +  WKNWKWRSS+
Sbjct: 510  AHVANNRYDEWKMYAIGGSANPTIFSEGNYFVAPQNSYAKQVTKREVNNGWKNWKWRSSR 569

Query: 980  DVFDNGAYFVQSGWGSCPPLYSEVQSFTVSEGSLVPALTAETGPLLCTAGYTC 1138
            DVF NGAYFV SGWGSC P+Y++ QSF V+ GS+VPALTA +GPL C  G  C
Sbjct: 570  DVFLNGAYFVPSGWGSCSPIYTKAQSFPVAPGSMVPALTANSGPLRCFIGKAC 622


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