BLASTX nr result

ID: Coptis23_contig00000778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000778
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08428174.1| hypothetical protein LYNGBM3L_06110 [Moorea p...    61   8e-08

>ref|ZP_08428174.1| hypothetical protein LYNGBM3L_06110 [Moorea producens 3L]
           gi|332353083|gb|EGJ32630.1| hypothetical protein
           LYNGBM3L_06110 [Moorea producens 3L]
          Length = 325

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/87 (29%), Positives = 36/87 (41%)
 Frame = -2

Query: 351 WWSASRIGTRILITCIRWWSASIIGTSILISCIRWWSASIVGTRILISCIRWWPASHICT 172
           WW+    G  IL+    WW+  + G  IL+    WW+  + G  IL+    WW       
Sbjct: 197 WWNGHLGGMGILVEWASWWNGHLGGMGILVEWASWWNGHLGGMGILVEWASWWNGHLGGM 256

Query: 171 RILISCIRWWPASHISTGILISCIRWW 91
            IL+    WW       GIL+    WW
Sbjct: 257 GILVEWASWWNGHLGGMGILVEWASWW 283



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/90 (28%), Positives = 35/90 (38%)
 Frame = -2

Query: 300 WWSASIIGTSILISCIRWWSASIVGTRILISCIRWWPASHICTRILISCIRWWPASHIST 121
           WW+  + G  IL+    WW+  + G  IL+    WW        IL+    WW       
Sbjct: 197 WWNGHLGGMGILVEWASWWNGHLGGMGILVEWASWWNGHLGGMGILVEWASWWNGHLGGM 256

Query: 120 GILISCIRWWPASHICTGILISCIRWRPSH 31
           GIL+    WW       GIL+    W   H
Sbjct: 257 GILVEWASWWNGHLGGMGILVEWASWWNGH 286



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/90 (30%), Positives = 37/90 (41%)
 Frame = -2

Query: 381 GTRILIICIRWWSASRIGTRILITCIRWWSASIIGTSILISCIRWWSASIVGTRILISCI 202
           G  IL+    WW+    G  IL+    WW+  + G  IL+    WW+  + G  IL+   
Sbjct: 204 GMGILVEWASWWNGHLGGMGILVEWASWWNGHLGGMGILVEWASWWNGHLGGMGILVEWA 263

Query: 201 RWWPASHICTRILISCIRWWPASHISTGIL 112
            WW        IL+    WW       GIL
Sbjct: 264 SWWNGHLGGMGILVEWASWWNGHLGGMGIL 293


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