BLASTX nr result

ID: Coptis23_contig00000738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000738
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302055.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_002306836.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
gb|AFK48382.1| unknown [Medicago truncatula]                          113   2e-23
ref|XP_003626787.1| 1-aminocyclopropane-1-carboxylate oxidase-li...   113   2e-23
ref|XP_002532376.1| Desacetoxyvindoline 4-hydroxylase, putative ...   112   3e-23

>ref|XP_002302055.1| predicted protein [Populus trichocarpa] gi|222843781|gb|EEE81328.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/95 (60%), Positives = 73/95 (76%), Gaps = 2/95 (2%)
 Frame = -2

Query: 281 YDRAKEIREFDETKAGVKGLVDSGVTRIPKIFIHSSEKL--PKESDSNGEYLQIPVINLE 108
           YD+AKE+R F ETKAGVKGLVDSGVT+IP+ F+H  E +  P    S+   LQIPV++ E
Sbjct: 20  YDKAKEVRAFSETKAGVKGLVDSGVTKIPRFFVHPPEYVQNPSSETSSDIGLQIPVVDFE 79

Query: 107 GVHGDRRKVVVEDIKRASETWGFFQMISHGIPVSV 3
           G  G RR+ VV++ ++A ETWGFFQM++HGIPVSV
Sbjct: 80  GFGGCRRQEVVDEARKALETWGFFQMVNHGIPVSV 114


>ref|XP_002306836.1| predicted protein [Populus trichocarpa] gi|222856285|gb|EEE93832.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/103 (56%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
 Frame = -2

Query: 308 ECILRKVLDYDRAKEIREFDETKAGVKGLVDSGVTRIPKIFIHSSEKLPK-ESDSNGEYL 132
           +  L+    YD+ K ++ FDETKAGVKGLVDSGVT+IP+ FIH  E + K  SDS    L
Sbjct: 10  DSFLQDESSYDKGKAVKAFDETKAGVKGLVDSGVTKIPRFFIHPPEDVEKSSSDSIHLGL 69

Query: 131 QIPVINLEGVHGDRRKVVVEDIKRASETWGFFQMISHGIPVSV 3
           Q+PVIN E     RR  VV +I++ASE WGFFQM++HGIPVS+
Sbjct: 70  QVPVINFEHFESCRRSEVVNEIRKASEIWGFFQMVNHGIPVSI 112


>gb|AFK48382.1| unknown [Medicago truncatula]
          Length = 304

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/96 (59%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
 Frame = -2

Query: 284 DYDRAKEIREFDETKAGVKGLVDSGVTRIPKIFIHSSEKLPKESDSNGEYLQIPVINLEG 105
           DYDRA E++ FDETK GVKGLVD+ VT IP++F H  +K    S SN   L IP I+L  
Sbjct: 16  DYDRASELKAFDETKDGVKGLVDASVTSIPRMFHHEFDKDSTSSSSNSHKLVIPSIDLVD 75

Query: 104 VHGD--RRKVVVEDIKRASETWGFFQMISHGIPVSV 3
           +H D  RRK+VVE I+ ASETWGFFQ+++HGI VSV
Sbjct: 76  IHQDPTRRKIVVEKIREASETWGFFQIVNHGIEVSV 111


>ref|XP_003626787.1| 1-aminocyclopropane-1-carboxylate oxidase-like protein [Medicago
           truncatula] gi|355520809|gb|AET01263.1|
           1-aminocyclopropane-1-carboxylate oxidase-like protein
           [Medicago truncatula]
          Length = 364

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/96 (59%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
 Frame = -2

Query: 284 DYDRAKEIREFDETKAGVKGLVDSGVTRIPKIFIHSSEKLPKESDSNGEYLQIPVINLEG 105
           DYDRA E++ FDETK GVKGLVD+ VT IP++F H  +K    S SN   L IP I+L  
Sbjct: 6   DYDRASELKAFDETKDGVKGLVDASVTSIPRMFHHEFDKDSTSSSSNSHKLVIPSIDLVD 65

Query: 104 VHGD--RRKVVVEDIKRASETWGFFQMISHGIPVSV 3
           +H D  RRK+VVE I+ ASETWGFFQ+++HGI VSV
Sbjct: 66  IHQDPTRRKIVVEKIREASETWGFFQIVNHGIEVSV 101


>ref|XP_002532376.1| Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis]
           gi|223527932|gb|EEF30019.1| Desacetoxyvindoline
           4-hydroxylase, putative [Ricinus communis]
          Length = 372

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/96 (56%), Positives = 74/96 (77%), Gaps = 3/96 (3%)
 Frame = -2

Query: 281 YDRAKEIREFDETKAGVKGLVDSGVTRIPKIFIHSSE--KLPKESDSNGEYLQIPVINLE 108
           YD+A+E++ FDETKAGVKGLVDS VT+IP+ F+H  +  K P    ++   LQ+PVI+L 
Sbjct: 21  YDKAEEVKAFDETKAGVKGLVDSDVTKIPRFFVHPPQNVKNPSSKITDVSLLQVPVIDLG 80

Query: 107 GVHGDRRKV-VVEDIKRASETWGFFQMISHGIPVSV 3
           G+   RR++ VV +I+ ASETWGFFQM++HG+PVSV
Sbjct: 81  GIGSHRRRLQVVNEIRNASETWGFFQMVNHGVPVSV 116


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