BLASTX nr result

ID: Coptis23_contig00000737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000737
         (1290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]         137   5e-30
ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245...   134   5e-29
ref|XP_002327162.1| predicted protein [Populus trichocarpa] gi|2...   124   4e-26
emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]      124   5e-26
ref|XP_002510190.1| conserved hypothetical protein [Ricinus comm...   124   7e-26

>gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
          Length = 386

 Score =  137 bits (346), Expect = 5e-30
 Identities = 80/157 (50%), Positives = 97/157 (61%), Gaps = 5/157 (3%)
 Frame = -1

Query: 1290 LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGFSLHPMYXXXXXXXXXXXXXGFNE 1111
            LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNG SLHPM                + 
Sbjct: 184  LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGMSLHPMCLPGALQPVQVSQMRMDL 243

Query: 1110 GNGLPP-----QMTMPANPESSTQASFGLSNQCTTSNQPIVMPSMKNIIPSERSYGLDSS 946
            G    P       T+  N ES TQ  F  SNQCT +NQ  V P M N++ SE S+GL+SS
Sbjct: 244  GEENRPLHLDMTGTLLMNQESPTQNLFHFSNQCTDANQSYV-PDMSNVVNSETSFGLESS 302

Query: 945  VQGHQGSFQLSATPEEMYSANMLRQQQLYASQASHHP 835
            ++ H G FQL  + EE+   +ML+ QQ+  + +  +P
Sbjct: 303  MRAHLGPFQLPNSSEEICREDMLQHQQINVNHSETNP 339


>ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
            gi|296082405|emb|CBI21410.3| unnamed protein product
            [Vitis vinifera]
          Length = 394

 Score =  134 bits (337), Expect = 5e-29
 Identities = 93/211 (44%), Positives = 125/211 (59%), Gaps = 17/211 (8%)
 Frame = -1

Query: 1290 LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGFSLHPMY--XXXXXXXXXXXXXGF 1117
            LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNG SLHPM                G 
Sbjct: 165  LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMCLPGVLPPVQLSQMRIGI 224

Query: 1116 NEGNG---LPPQMTMPANPESSTQASFGLSNQCTTSNQPIVMPSMKNIIPSERSYGLDSS 946
             E NG   +    T+P N E+     + L+NQ T+S+ P V P++ +I+ SE S+GL+SS
Sbjct: 225  GEENGSLHMDMTGTLPVNQET---MEYRLANQGTSSSHPSV-PNLTDIMNSETSFGLESS 280

Query: 945  VQGHQGSFQLSATPEEMYSANMLRQQQLYASQASHHPPGNN----KMKTMTT-------- 802
            +Q H G FQL  +  ++   ++L  QQL  S A     G N    KM+T  T        
Sbjct: 281  IQAHLGPFQLQTSSADICREDVLPHQQLNISCA-----GTNSLELKMETTITVSLPYDAQ 335

Query: 801  ASVLEHGNCVEASLLQGEISEGMLPKGVDNS 709
            AS ++  N +E+ + + ++SEGML K ++++
Sbjct: 336  ASGVKDSNTLESCIQRRDLSEGMLLKNIEHN 366


>ref|XP_002327162.1| predicted protein [Populus trichocarpa] gi|222835477|gb|EEE73912.1|
            predicted protein [Populus trichocarpa]
          Length = 310

 Score =  124 bits (312), Expect = 4e-26
 Identities = 73/138 (52%), Positives = 85/138 (61%), Gaps = 6/138 (4%)
 Frame = -1

Query: 1290 LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGFSLHPMY--XXXXXXXXXXXXXGF 1117
            LIPNSNKTDKASMLDEAIEYLKQLQLQVQML+MRNG SLHPM                 F
Sbjct: 149  LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGLSLHPMCLPGALQPMQLPLSGMSF 208

Query: 1116 NEGNGLPPQMTM----PANPESSTQASFGLSNQCTTSNQPIVMPSMKNIIPSERSYGLDS 949
            +EG GL    T+     AN ESS Q S  L  QCT SNQPI +PS  NI  SE ++G + 
Sbjct: 209  DEGIGLLTTNTLTGIFSANEESSEQNSLNLPTQCTISNQPITIPSGTNITSSETNFGFEP 268

Query: 948  SVQGHQGSFQLSATPEEM 895
             +  +   F LS + +E+
Sbjct: 269  QIHVNHAPFNLSTSSKEI 286


>emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
          Length = 445

 Score =  124 bits (311), Expect = 5e-26
 Identities = 98/220 (44%), Positives = 129/220 (58%), Gaps = 22/220 (10%)
 Frame = -1

Query: 1290 LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGFSLHPMY--XXXXXXXXXXXXXGF 1117
            LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM++G +L PM                GF
Sbjct: 210  LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMKSGINLAPMCMPGQLQSMQLPQICMGF 269

Query: 1116 NEGNG-LPPQMTM---PAN-PESSTQASFGLSN--QCTTSNQPIVMPSMKNIIPSE---- 970
               NG LP  M M   P N  +SS+Q SF L N    ++S Q +VMP++ N+IP+     
Sbjct: 270  TTENGTLPITMGMGLLPVNQQDSSSQPSFDLPNISPPSSSLQSLVMPNIPNVIPNSGGCA 329

Query: 969  --RSYGLDSSVQGHQGSFQLSATPEEMYSANMLRQQQLYASQASHHPPGNNKMKTMTTA- 799
               S+GLDSS QG    +QLS+  E++Y A++L QQQ+   Q S      N+ KT+ ++ 
Sbjct: 330  ETSSFGLDSS-QGLVRPYQLSSPAEDIYRADILPQQQVDMIQ-SVRSTAENQTKTVASSL 387

Query: 798  ------SVLEHGNCVEASLLQGEISEGMLPKGVDNSHTLI 697
                  +VLE  N +EA +  G+     LPK V NS +++
Sbjct: 388  SMDGQVTVLERANYLEAFMCVGDKVRPGLPKDV-NSQSMV 426


>ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
            gi|223550891|gb|EEF52377.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 312

 Score =  124 bits (310), Expect = 7e-26
 Identities = 70/138 (50%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
 Frame = -1

Query: 1290 LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGFSLHPMY--XXXXXXXXXXXXXGF 1117
            LIPNSNKTDKASMLDEAIEYLKQLQLQVQML+MRNG SLHPM                 F
Sbjct: 151  LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGLSLHPMCLPGVLQPMQLPLTGMSF 210

Query: 1116 NEGNGL----PPQMTMPANPESSTQASFGLSNQCTTSNQPIVMPSMKNIIPSERSYGLDS 949
            +EG GL            N ESS QA+  L N+C  SNQPI++PS +NI  SE  +G + 
Sbjct: 211  DEGGGLLNTNSATGAFSENDESSAQATLSLPNRCAVSNQPIILPSTRNITSSETPFGFEP 270

Query: 948  SVQGHQGSFQLSATPEEM 895
             +Q     F LS + +++
Sbjct: 271  LIQASGEPFNLSTSSKDI 288


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