BLASTX nr result

ID: Coptis23_contig00000698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000698
         (1849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282743.1| PREDICTED: peroxisomal membrane protein PEX1...   412   e-112
emb|CAN67215.1| hypothetical protein VITISV_005839 [Vitis vinifera]   412   e-112
ref|XP_002511400.1| conserved hypothetical protein [Ricinus comm...   401   e-109
ref|XP_002318047.1| predicted protein [Populus trichocarpa] gi|2...   375   e-101
ref|XP_002321598.1| predicted protein [Populus trichocarpa] gi|2...   359   1e-96

>ref|XP_002282743.1| PREDICTED: peroxisomal membrane protein PEX14 [Vitis vinifera]
            gi|297733783|emb|CBI15030.3| unnamed protein product
            [Vitis vinifera]
          Length = 523

 Score =  412 bits (1059), Expect = e-112
 Identities = 252/527 (47%), Positives = 305/527 (57%), Gaps = 32/527 (6%)
 Frame = -3

Query: 1703 MGSESTPPDEKSPEP--------VKPMAEERQTLPGDITKESSPSSVFVNSEPIREDQVQ 1548
            M ++STPP + + E         V+P  E++Q      T   SP SVFVNSEP+RE+QVQ
Sbjct: 1    MATQSTPPPDSTTEKPQTPASEIVQPRNEDQQDAKAAAT--ISPPSVFVNSEPMREEQVQ 58

Query: 1547 NAVKFLSHPKVRGSPVMYRRSFLEKKGLSKEEIDEAFRRVPDPAPTVTATQATNQSQDGQ 1368
            NAVKFLSHPKVRGSPV+YRRSFLEKKGL+KEEIDEAFRRVPD +PTVT  QA + +QDGQ
Sbjct: 59   NAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRRVPDQSPTVTGVQAVSANQDGQ 118

Query: 1367 VKSATNLXXXXXXXXXXXXXXXXXXVLSTMTALRPARFHWSHAFFAIGFLAASGAGTALL 1188
            +KS+                     +  T T  R   FHWSHAF AIGFLAASGAGTA+L
Sbjct: 119  LKSSNIQQQAQAQTLHPSAATPAGVISKTGTQYR---FHWSHAFLAIGFLAASGAGTAIL 175

Query: 1187 FKNAILPRLKSWIRKVVLEEETDSMKKLDSKPSLXXXXXXXXXXXXXXXXXXXXASEELV 1008
            FKNA +PRLKSWIRK+VLE E D ++K +SKPSL                     S+E++
Sbjct: 176  FKNAFIPRLKSWIRKIVLEGENDIVQKSNSKPSLAEEATAAAKAAAAAAADVAKTSQEIL 235

Query: 1007 NSKHEERRYFDSLRNLLDVQVEEMKSMSKAIRQLEVTKEVATSSIKQTEVKS-------- 852
             SK EE R  +   NLL+VQV+EMKSMS AIR+LE         I+Q + +         
Sbjct: 236  TSKIEENRRLEEFMNLLNVQVQEMKSMSNAIRKLEGPNNSTGRLIQQEDTRGLMTTSKHL 295

Query: 851  ---------ASNXXXXXXXXXXXXXXXPHSKSYMEIMAMIQRGETPPGIKDINDLPPNPN 699
                     + +               PH KSY+EIMAM+QRGE PP I+DINDLPPNPN
Sbjct: 296  NVNGKAEFDSRSVRSSSPPASSEPSVAPHPKSYLEIMAMVQRGEKPPNIRDINDLPPNPN 355

Query: 698  QAPSNPRLAPRIKPWEVSQGQNGSHHI-------EGSNSNAQDYIPSLHVNGNGSDPWWQ 540
            Q  SNPRLAPR KPWEV Q Q  + H        EG NS AQD      +NG+ S  WWQ
Sbjct: 356  QPLSNPRLAPRTKPWEVGQVQYSAGHAYQSQVTGEGFNSRAQDNGVGYQLNGD-SSTWWQ 414

Query: 539  RKNVRITELEPENELRVNSYPPSGNERLNQRXXXXXXXXXXXXXXXXXAIRQPKASIQSE 360
            +KN RITE+E E+E R  SY  S NE+  QR                 AIRQPK+SIQ E
Sbjct: 415  QKNARITEIETEDEPRTASYTAS-NEQPIQRTWVPPQPPPIAMPEAAAAIRQPKSSIQRE 473

Query: 359  QSNGNHLIAHPSDDFDELQRITKXXXXXXXXXXXXXSTVQNLSEIQE 219
                +  ++ PSD+ DELQRITK             S+  N SE+Q+
Sbjct: 474  SLVNDQSVSRPSDEIDELQRITKISESGGVVEIKEESSGLNSSEMQQ 520


>emb|CAN67215.1| hypothetical protein VITISV_005839 [Vitis vinifera]
          Length = 523

 Score =  412 bits (1059), Expect = e-112
 Identities = 252/527 (47%), Positives = 305/527 (57%), Gaps = 32/527 (6%)
 Frame = -3

Query: 1703 MGSESTPPDEKSPEP--------VKPMAEERQTLPGDITKESSPSSVFVNSEPIREDQVQ 1548
            M ++STPP + + E         V+P  E++Q      T   SP SVFVNSEP+RE+QVQ
Sbjct: 1    MATQSTPPPDSTTEKPQTPASEXVQPRNEDQQDAKAAAT--ISPPSVFVNSEPMREEQVQ 58

Query: 1547 NAVKFLSHPKVRGSPVMYRRSFLEKKGLSKEEIDEAFRRVPDPAPTVTATQATNQSQDGQ 1368
            NAVKFLSHPKVRGSPV+YRRSFLEKKGL+KEEIDEAFRRVPD +PTVT  QA + +QDGQ
Sbjct: 59   NAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRRVPDQSPTVTGVQAVSANQDGQ 118

Query: 1367 VKSATNLXXXXXXXXXXXXXXXXXXVLSTMTALRPARFHWSHAFFAIGFLAASGAGTALL 1188
            +KS+                     +  T T  R   FHWSHAF AIGFLAASGAGTA+L
Sbjct: 119  LKSSNIQQQAQAQTLHPSAATPAGVISKTGTQYR---FHWSHAFLAIGFLAASGAGTAIL 175

Query: 1187 FKNAILPRLKSWIRKVVLEEETDSMKKLDSKPSLXXXXXXXXXXXXXXXXXXXXASEELV 1008
            FKNA +PRLKSWIRK+VLE E D ++K +SKPSL                     S+E++
Sbjct: 176  FKNAFIPRLKSWIRKIVLEGENDIVQKSNSKPSLAEEATAAAKAAAAAAADVAKTSQEIL 235

Query: 1007 NSKHEERRYFDSLRNLLDVQVEEMKSMSKAIRQLEVTKEVATSSIKQTEVKS-------- 852
             SK EE R  +   NLL+VQV+EMKSMS AIR+LE         I+Q + +         
Sbjct: 236  TSKIEENRRLEEFMNLLNVQVQEMKSMSNAIRKLEGPNNSTGRLIQQEDTRGLMTTSKHL 295

Query: 851  ---------ASNXXXXXXXXXXXXXXXPHSKSYMEIMAMIQRGETPPGIKDINDLPPNPN 699
                     + +               PH KSY+EIMAM+QRGE PP I+DINDLPPNPN
Sbjct: 296  NVNGKAEFDSRSVRSSSPPASSEPSVAPHPKSYLEIMAMVQRGEKPPNIRDINDLPPNPN 355

Query: 698  QAPSNPRLAPRIKPWEVSQGQNGSHHI-------EGSNSNAQDYIPSLHVNGNGSDPWWQ 540
            Q  SNPRLAPR KPWEV Q Q  + H        EG NS AQD      +NG+ S  WWQ
Sbjct: 356  QPLSNPRLAPRTKPWEVGQVQYSAGHAYQSQVTGEGFNSRAQDNGVGYQLNGD-SSTWWQ 414

Query: 539  RKNVRITELEPENELRVNSYPPSGNERLNQRXXXXXXXXXXXXXXXXXAIRQPKASIQSE 360
            +KN RITE+E E+E R  SY  S NE+  QR                 AIRQPK+SIQ E
Sbjct: 415  QKNARITEIETEDEPRTASYTAS-NEQPIQRTWVPPQPPPIAMPEAAAAIRQPKSSIQRE 473

Query: 359  QSNGNHLIAHPSDDFDELQRITKXXXXXXXXXXXXXSTVQNLSEIQE 219
                +  ++ PSD+ DELQRITK             S+  N SE+Q+
Sbjct: 474  SLVNDQSVSRPSDEIDELQRITKISESGGVVEIKEESSGLNSSEMQQ 520


>ref|XP_002511400.1| conserved hypothetical protein [Ricinus communis]
            gi|223550515|gb|EEF52002.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 535

 Score =  401 bits (1030), Expect = e-109
 Identities = 248/531 (46%), Positives = 309/531 (58%), Gaps = 36/531 (6%)
 Frame = -3

Query: 1703 MGSESTPP-----DEK----SPEPVKPMAEERQTLPGDITKESSPSSVFVNSEPIREDQV 1551
            M +ES PP     DEK    + E  +P  E +Q    ++TK+S PS VFVNSEP+REDQV
Sbjct: 1    MATESPPPPSSSSDEKPQNSAVEAAQPTNEIQQQAREEVTKQSPPS-VFVNSEPMREDQV 59

Query: 1550 QNAVKFLSHPKVRGSPVMYRRSFLEKKGLSKEEIDEAFRRVPDPAPTVTATQATNQSQDG 1371
            QNAVKFLSHPKVRGSPVMYRRSFLE+KGL+KEEIDEAFRRVPDP+P   + QAT+ SQ+ 
Sbjct: 60   QNAVKFLSHPKVRGSPVMYRRSFLERKGLTKEEIDEAFRRVPDPSP---SAQATSTSQEA 116

Query: 1370 QVKSATNLXXXXXXXXXXXXXXXXXXVLSTMTALRPARFHWSHAFFAIGFLAASGAGTAL 1191
            Q+ S +N+                   +S+   L   RFHW HA FA+G LAASGAGTA+
Sbjct: 117  QLNSTSNIQPASQTQALQPAAAAPTGAISSAGTLMRTRFHWYHAVFAVGVLAASGAGTAV 176

Query: 1190 LFKNAILPRLKSWIRKVVLEEETDSMKKLDSKPSLXXXXXXXXXXXXXXXXXXXXASEEL 1011
            L KN I+PR KSWIRKVV EEE D +KK ++KPSL                    AS+E+
Sbjct: 177  LIKNCIVPRFKSWIRKVVFEEE-DPVKKTNAKPSLAEEAAAAAKAAAAAAADVAKASQEM 235

Query: 1010 VNSKHEERRYFDSLRNLLDVQVEEMKSMSKAIRQLE-----------VTKEVATSSI--- 873
            +NSK+EE+RYF    NLLD+QV+EMKSMS AI +LE           V +E  T S+   
Sbjct: 236  LNSKNEEKRYFGEFMNLLDLQVQEMKSMSTAIHKLEGQNNNLGRTSLVNQEDYTLSVGNH 295

Query: 872  -KQT----EVKSASN-XXXXXXXXXXXXXXXPHSKSYMEIMAMIQRGETPPGIKDINDLP 711
             KQT    +V+S S                 PH KSYMEIMAM+QRGE PP I+D+ND P
Sbjct: 296  PKQTYVNGKVESDSRAVRSSSPPTAAEPTVAPHPKSYMEIMAMVQRGERPPNIRDVNDQP 355

Query: 710  PNPNQAPSNPRLAPRIKPWEVSQGQNGSHHI-------EGSNSNAQDYIPSLHVNGNGSD 552
            PNPNQ  SNP +APR KPWE  Q Q+    +       EGS+S AQD   +   +G  + 
Sbjct: 356  PNPNQKISNPNIAPRTKPWESGQFQSSPSPVLQSQANGEGSDSKAQDNGVTYQFDGESTV 415

Query: 551  PWWQRKNVRITELEPENELRVNSYPPSGNERLNQRXXXXXXXXXXXXXXXXXAIRQPKAS 372
            PWWQRKN RITE+E E+E++   Y    NE+  +R                 AIR+PK S
Sbjct: 416  PWWQRKNARITEIENEDEVKAGPYGTQSNEQPVRRAWVPPQPPPVAMAEAAEAIRRPKPS 475

Query: 371  IQSEQSNGNHLIAHPSDDFDELQRITKXXXXXXXXXXXXXSTVQNLSEIQE 219
            +Q EQS      +  +D  DELQ+ITK              +  N +EI+E
Sbjct: 476  VQKEQSGEEQSKSLQTDATDELQKITKIAESGGGMGINDGGSELNSNEIKE 526


>ref|XP_002318047.1| predicted protein [Populus trichocarpa] gi|222858720|gb|EEE96267.1|
            predicted protein [Populus trichocarpa]
          Length = 481

 Score =  375 bits (964), Expect = e-101
 Identities = 225/483 (46%), Positives = 277/483 (57%), Gaps = 20/483 (4%)
 Frame = -3

Query: 1607 ESSPSSVFVNSEPIREDQVQNAVKFLSHPKVRGSPVMYRRSFLEKKGLSKEEIDEAFRRV 1428
            + SP SVFVNSEP+RE+QVQNAVKFLSHPKVRGSPVMYRRSFLEKKGL+KEEIDEAF RV
Sbjct: 16   KQSPPSVFVNSEPMREEQVQNAVKFLSHPKVRGSPVMYRRSFLEKKGLTKEEIDEAFLRV 75

Query: 1427 PDPAPTVTATQATNQSQ-DGQVKSATNLXXXXXXXXXXXXXXXXXXVLSTMTALRPARFH 1251
            PDP P   +TQAT+ +Q +GQVKS  N                   V+S++  L  +RFH
Sbjct: 76   PDPTP---STQATSLNQAEGQVKSTPNAQPLASAQTLQPVAAGPTAVISSVGTLTRSRFH 132

Query: 1250 WSHAFFAIGFLAASGAGTALLFKNAILPRLKSWIRKVVLEEETDSMKKLDSKPSLXXXXX 1071
            W HA FA+G LA SGAGT +L KN ++PRLKSWIRKVVLEEE D++KK + KPSL     
Sbjct: 133  WYHAVFAVGLLAVSGAGTVVLVKNTVIPRLKSWIRKVVLEEEDDNVKKTNLKPSLAEEAA 192

Query: 1070 XXXXXXXXXXXXXXXASEELVNSKHEERRYFDSLRNLLDVQVEEMKSMSKAIRQLE---- 903
                           AS+EL+NSK+EE+RYF     +LDVQV+EMKSMS AI +LE    
Sbjct: 193  AAAKSAAAAAVDVARASQELLNSKNEEKRYFKEFMKMLDVQVQEMKSMSTAIHRLEGQTD 252

Query: 902  --VTKEVA--------TSSIKQTEVKSAS-----NXXXXXXXXXXXXXXXPHSKSYMEIM 768
              V   +A         ++ KQT     +     +               PH KSYMEIM
Sbjct: 253  NRVRNSLADQEDYRALVANPKQTYTNGKTEFDLHSGGSSSQPASAEPSAAPHPKSYMEIM 312

Query: 767  AMIQRGETPPGIKDINDLPPNPNQAPSNPRLAPRIKPWEVSQGQNGSHHIEGSNSNAQDY 588
             M++RGE P  I+DIND PPNP+Q  SNPR+APR KPWEV Q QN S             
Sbjct: 313  EMVRRGERPGNIRDINDQPPNPSQQISNPRIAPRTKPWEVGQVQNNS------------- 359

Query: 587  IPSLHVNGNGSDPWWQRKNVRITELEPENELRVNSYPPSGNERLNQRXXXXXXXXXXXXX 408
                      + PWWQ+KN  I E++ E+E++   Y    N++  +R             
Sbjct: 360  -------SQSTTPWWQQKNAGIAEIDNEDEVKAGRYGGQNNQQPVRRTWVPPRPPPVVMA 412

Query: 407  XXXXAIRQPKASIQSEQSNGNHLIAHPSDDFDELQRITKXXXXXXXXXXXXXSTVQNLSE 228
                AIR+PK SIQ EQ   +  ++HP+D  DELQRITK              +V N SE
Sbjct: 413  EAAEAIRRPKQSIQKEQLEDDRSVSHPTDTADELQRITKISESGGAVEINGGGSVLNSSE 472

Query: 227  IQE 219
            IQE
Sbjct: 473  IQE 475


>ref|XP_002321598.1| predicted protein [Populus trichocarpa] gi|222868594|gb|EEF05725.1|
            predicted protein [Populus trichocarpa]
          Length = 482

 Score =  359 bits (922), Expect = 1e-96
 Identities = 225/502 (44%), Positives = 279/502 (55%), Gaps = 20/502 (3%)
 Frame = -3

Query: 1664 EPVKPMAEERQTLPGDITKESSPSSVFVNSEPIREDQVQNAVKFLSHPKVRGSPVMYRRS 1485
            E V+P    +Q    +  K+S PS VFVNSEP+RE+QVQNAVKFLSHPKVRGSPVMYRRS
Sbjct: 1    ENVQPSTGVQQGAGAEAIKQSPPS-VFVNSEPMREEQVQNAVKFLSHPKVRGSPVMYRRS 59

Query: 1484 FLEKKGLSKEEIDEAFRRVPDPAPTVTATQATNQSQ-DGQVKSATNLXXXXXXXXXXXXX 1308
            FLEKKGL+KEEIDEAFRRVPDP P   +TQAT+ SQ +GQV S  N+             
Sbjct: 60   FLEKKGLTKEEIDEAFRRVPDPTP---STQATSSSQAEGQVISTPNVQPPAPAQTLQPVA 116

Query: 1307 XXXXXVLSTMTALRPARFHWSHAFFAIGFLAASGAGTALLFKNAILPRLKSWIRKVVLEE 1128
                 V+STM  L   +F+W HAF A+G LA SGAGTA+L K  I+PRLKSWIRKVVLEE
Sbjct: 117  AAPTGVISTMRTLTQHQFNWHHAFVAVGVLAVSGAGTAVLVKKTIIPRLKSWIRKVVLEE 176

Query: 1127 ETDSMKKLDSKPSLXXXXXXXXXXXXXXXXXXXXASEELVNSKHEERRYFDSLRNLLDVQ 948
            E DS+ K ++K SL                    AS+E++NSK+EE+  F    N+LDVQ
Sbjct: 177  EDDSVMKTNTKLSLAEEAAAAAKAAAAAAADVARASQEMLNSKNEEKICFKEFMNMLDVQ 236

Query: 947  VEEMKSMSKAIRQLEVTKE--------------VATSSIKQTEVKSAS-----NXXXXXX 825
            V+EMKSMS AI +LE   +               + ++ KQT     +     +      
Sbjct: 237  VQEMKSMSTAIHRLEGQTDYRVRNSLADQEDYRASVANPKQTFTNGKAEFDLRSGRSSSQ 296

Query: 824  XXXXXXXXXPHSKSYMEIMAMIQRGETPPGIKDINDLPPNPNQAPSNPRLAPRIKPWEVS 645
                      H KS+MEIM   QRGE P  I+DIND PPNP Q  SNPR+A R KPWEV 
Sbjct: 297  PMSAQASVAAHPKSFMEIMD--QRGEKPANIRDINDQPPNPYQQISNPRIASRTKPWEVG 354

Query: 644  QGQNGSHHIEGSNSNAQDYIPSLHVNGNGSDPWWQRKNVRITELEPENELRVNSYPPSGN 465
            + QN S                       ++PWWQ+KN RITE+E  +E++   +    +
Sbjct: 355  RAQNNS--------------------SQSTEPWWQQKNARITEIENGDEIKAGPFGAQTS 394

Query: 464  ERLNQRXXXXXXXXXXXXXXXXXAIRQPKASIQSEQSNGNHLIAHPSDDFDELQRITKXX 285
            E+  +R                 AIR+PK SIQ EQS  +  ++HP D  DELQRITK  
Sbjct: 395  EQPVRRAWVPPQPPPVVMPEAAEAIRRPKQSIQKEQSEDDQSVSHPIDTADELQRITKIS 454

Query: 284  XXXXXXXXXXXSTVQNLSEIQE 219
                        +V N SEIQE
Sbjct: 455  ESGGAVEINGGGSVLNSSEIQE 476


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