BLASTX nr result

ID: Coptis23_contig00000686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000686
         (1309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABS52645.1| GEM-like 1 [Vitis vinifera]                            325   2e-86
ref|XP_002285708.1| PREDICTED: GEM-like 1 [Vitis vinifera]            323   8e-86
ref|XP_002307347.1| predicted protein [Populus trichocarpa] gi|2...   323   8e-86
ref|XP_002534314.1| conserved hypothetical protein [Ricinus comm...   322   1e-85
ref|XP_002301081.1| predicted protein [Populus trichocarpa] gi|2...   322   1e-85

>gb|ABS52645.1| GEM-like 1 [Vitis vinifera]
          Length = 284

 Score =  325 bits (833), Expect = 2e-86
 Identities = 170/283 (60%), Positives = 202/283 (71%), Gaps = 16/283 (5%)
 Frame = +3

Query: 225  KPKSPLNTINQDEPDPLNSNNKVQSKSVTWST-ELTRESPHPSS---------------L 356
            KP+S         P P    N V      W+T  ++ ++PHP S                
Sbjct: 13   KPESDYPPSADYAPYPKLDPNDVAPPKEDWTTVTISSQTPHPVSQNSGSPISESASEGPA 72

Query: 357  PGYVESTSMPPRDNNPYVNAXXXXXXXXXXXXXXXXATVKNTVSTVKDVLGKWGKKVGES 536
            P    S +  P ++NPY+++                +++KN + +VKDVLGKWGKK  E+
Sbjct: 73   PIARNSATTMPVESNPYISSSPAPA-----------SSMKNKMDSVKDVLGKWGKKAAEA 121

Query: 537  TKQAEVLAGNVWQHLRTGPSFADAAMGRIAQGTKVIAEGGYEKIFRQTFETVSEEQLQRT 716
            TK+AE LAGN+WQHL+TGPSFADAA+GRIAQGTKV+AEGGYEKIF+QTFETV EEQLQ++
Sbjct: 122  TKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGYEKIFQQTFETVPEEQLQKS 181

Query: 717  YACYLSTSAGPVMGILYISTAKLAFCSDNPLPYKVGEQNEWTYYKVVIPLHQLKAVNPSI 896
            YACYLSTSAGPVMGILY+ST KLAFCSD+PL YKVGEQ EW+YYKVVIPLHQLKAVN S 
Sbjct: 182  YACYLSTSAGPVMGILYLSTEKLAFCSDSPLSYKVGEQTEWSYYKVVIPLHQLKAVNTST 241

Query: 897  SKVNRAEKYIQVISVDNHEFWFMGFVNYDSAVKYLQDALQARF 1025
            SKVN AEKY+Q+ISVDNHEFWFMGFV+YDSAVK LQ ALQ  F
Sbjct: 242  SKVNPAEKYVQIISVDNHEFWFMGFVHYDSAVKNLQGALQHHF 284


>ref|XP_002285708.1| PREDICTED: GEM-like 1 [Vitis vinifera]
          Length = 284

 Score =  323 bits (827), Expect = 8e-86
 Identities = 169/283 (59%), Positives = 201/283 (71%), Gaps = 16/283 (5%)
 Frame = +3

Query: 225  KPKSPLNTINQDEPDPLNSNNKVQSKSVTWST-ELTRESPHPSS---------------L 356
            KP+S         P P    N V      W+T  ++ ++PHP S                
Sbjct: 13   KPESDYPPSADYAPYPKLDPNDVAPPKEDWTTVTISSQTPHPVSQNSGSPISESASEGPA 72

Query: 357  PGYVESTSMPPRDNNPYVNAXXXXXXXXXXXXXXXXATVKNTVSTVKDVLGKWGKKVGES 536
            P    S +  P ++NPY+++                +++KN + +VKDVLGKWGKK  E+
Sbjct: 73   PIARNSATTMPVESNPYISSSPAPA-----------SSMKNKMDSVKDVLGKWGKKAAEA 121

Query: 537  TKQAEVLAGNVWQHLRTGPSFADAAMGRIAQGTKVIAEGGYEKIFRQTFETVSEEQLQRT 716
            TK+AE LAGN+WQHL+ GPSFADAA+GRIAQGTKV+AEGGYEKIF+QTFETV EEQLQ++
Sbjct: 122  TKKAEDLAGNMWQHLKMGPSFADAAVGRIAQGTKVLAEGGYEKIFQQTFETVPEEQLQKS 181

Query: 717  YACYLSTSAGPVMGILYISTAKLAFCSDNPLPYKVGEQNEWTYYKVVIPLHQLKAVNPSI 896
            YACYLSTSAGPVMGILY+ST KLAFCSD+PL YKVGEQ EW+YYKVVIPLHQLKAVN S 
Sbjct: 182  YACYLSTSAGPVMGILYLSTEKLAFCSDSPLSYKVGEQTEWSYYKVVIPLHQLKAVNTST 241

Query: 897  SKVNRAEKYIQVISVDNHEFWFMGFVNYDSAVKYLQDALQARF 1025
            SKVN AEKY+Q+ISVDNHEFWFMGFV+YDSAVK LQ ALQ  F
Sbjct: 242  SKVNPAEKYVQIISVDNHEFWFMGFVHYDSAVKNLQGALQHHF 284


>ref|XP_002307347.1| predicted protein [Populus trichocarpa] gi|222856796|gb|EEE94343.1|
            predicted protein [Populus trichocarpa]
          Length = 294

 Score =  323 bits (827), Expect = 8e-86
 Identities = 173/281 (61%), Positives = 202/281 (71%), Gaps = 1/281 (0%)
 Frame = +3

Query: 177  EHINI-DGIEDIKLENDKPKSPLNTINQDEPDPLNSNNKVQSKSVTWSTELTRESPHPSS 353
            +H+ + D I D    +  P   L+   QD   PL++   V   S T S         P  
Sbjct: 26   KHVEVKDKISDPHTTDYAPYPKLDP--QDVAPPLDNWANVSMGSTTLSNPAGATQGSPP- 82

Query: 354  LPGYVESTSMPPRDNNPYVNAXXXXXXXXXXXXXXXXATVKNTVSTVKDVLGKWGKKVGE 533
            + G   +T   P D+NPYV+                 ++ KN +  VKDVLGKWGKK  E
Sbjct: 83   IAGTTVTTM--PADSNPYVSPAPVAP-----------SSSKNKMEAVKDVLGKWGKKAAE 129

Query: 534  STKQAEVLAGNVWQHLRTGPSFADAAMGRIAQGTKVIAEGGYEKIFRQTFETVSEEQLQR 713
            +TK+AE LAGN+WQHL+TGPSFADAA+GRIAQGTKV+AEGGYEKIFRQTFETV EEQL +
Sbjct: 130  ATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLVK 189

Query: 714  TYACYLSTSAGPVMGILYISTAKLAFCSDNPLPYKVGEQNEWTYYKVVIPLHQLKAVNPS 893
            T+ACYLSTSAGPVMG+LY+STAKLAFCSDNPL YK+GEQ EW+YYKVVIPLHQLKAVNPS
Sbjct: 190  TFACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYKIGEQTEWSYYKVVIPLHQLKAVNPS 249

Query: 894  ISKVNRAEKYIQVISVDNHEFWFMGFVNYDSAVKYLQDALQ 1016
             SKV  AEKYIQ+ISVDNHEFWFMGFV YD+AVK LQ+ALQ
Sbjct: 250  TSKVKSAEKYIQIISVDNHEFWFMGFVYYDNAVKSLQEALQ 290


>ref|XP_002534314.1| conserved hypothetical protein [Ricinus communis]
            gi|223525515|gb|EEF28070.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 313

 Score =  322 bits (826), Expect = 1e-85
 Identities = 175/287 (60%), Positives = 200/287 (69%), Gaps = 4/287 (1%)
 Frame = +3

Query: 189  IDGIEDIKLENDKPKSPLNTINQD-EPDPLNSNNKVQS--KSVTWSTELTRESPHPSSLP 359
            I+  ED  +  D  KS       D E D L   N++ S  KSV WS EL  ES    +  
Sbjct: 28   IENREDALVNGDAEKSSAAATGSDPEVDQLQGPNRMGSARKSVHWSPELVTESHASQNNS 87

Query: 360  GYVESTSMPPRDNNPYVNAXXXXXXXXXXXXXXXXA-TVKNTVSTVKDVLGKWGKKVGES 536
                +      +NN Y +                 + + K+T+ +V+DVLG  GKKVGE+
Sbjct: 88   SNSNNNEHNNNNNNVYFDGSNPYVSSSPAQASSSSSFSFKDTMGSVRDVLGS-GKKVGEA 146

Query: 537  TKQAEVLAGNVWQHLRTGPSFADAAMGRIAQGTKVIAEGGYEKIFRQTFETVSEEQLQRT 716
            TK+AE LAGN WQHL+T PSF DAA+GRIAQGTKV+AEGGYEKIFRQTFETV EEQLQ +
Sbjct: 147  TKKAEDLAGNTWQHLKTSPSFTDAALGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLQNS 206

Query: 717  YACYLSTSAGPVMGILYISTAKLAFCSDNPLPYKVGEQNEWTYYKVVIPLHQLKAVNPSI 896
            YACYLSTSAGPVMGILY+STAKLAFCSDNPL YK   Q EW+YYKVVIPLHQLKAVNPS 
Sbjct: 207  YACYLSTSAGPVMGILYVSTAKLAFCSDNPLSYKNSGQTEWSYYKVVIPLHQLKAVNPSS 266

Query: 897  SKVNRAEKYIQVISVDNHEFWFMGFVNYDSAVKYLQDALQARFLQSV 1037
            S+ N AEKY+QVISVDNHEFWFMGF+NYD AVK LQD LQA  LQSV
Sbjct: 267  SRTNPAEKYVQVISVDNHEFWFMGFLNYDGAVKCLQDGLQAHSLQSV 313


>ref|XP_002301081.1| predicted protein [Populus trichocarpa] gi|222842807|gb|EEE80354.1|
            predicted protein [Populus trichocarpa]
          Length = 290

 Score =  322 bits (825), Expect = 1e-85
 Identities = 169/270 (62%), Positives = 199/270 (73%), Gaps = 5/270 (1%)
 Frame = +3

Query: 222  DKPKSPLNTINQDEPDPLNSNNKVQSKSVTW---STELTRES--PHPSSLPGYVESTSMP 386
            DK K+  +  +   P P      V      W   ST  T +S  P PS + G   +T   
Sbjct: 30   DKYKNSNSHTSDYAPYPKLDPKDVAPSPENWANLSTGSTTQSKPPGPSPIAGTAATTM-- 87

Query: 387  PRDNNPYVNAXXXXXXXXXXXXXXXXATVKNTVSTVKDVLGKWGKKVGESTKQAEVLAGN 566
            P ++NPYV+                 ++ KNTV  VKDVLGKWGKK  E+TK+AE LAGN
Sbjct: 88   PAESNPYVSPGPVAP-----------SSSKNTVEAVKDVLGKWGKKAAEATKKAEDLAGN 136

Query: 567  VWQHLRTGPSFADAAMGRIAQGTKVIAEGGYEKIFRQTFETVSEEQLQRTYACYLSTSAG 746
            +WQHL+TGPSFADAA+GRIAQGTKV+AEGGYEKIF+QTFETV EE+L +T+ACYLSTSAG
Sbjct: 137  MWQHLKTGPSFADAAVGRIAQGTKVLAEGGYEKIFQQTFETVPEEKLVKTFACYLSTSAG 196

Query: 747  PVMGILYISTAKLAFCSDNPLPYKVGEQNEWTYYKVVIPLHQLKAVNPSISKVNRAEKYI 926
            PVMG+LY+STAKLAFCSDNPL YKVGEQ++W+YYKVVIPLHQLKAVNPS SKVN AEKYI
Sbjct: 197  PVMGVLYLSTAKLAFCSDNPLSYKVGEQSQWSYYKVVIPLHQLKAVNPSTSKVNSAEKYI 256

Query: 927  QVISVDNHEFWFMGFVNYDSAVKYLQDALQ 1016
            Q+IS DNHEFWFMGFV YD+AV+ LQ AL+
Sbjct: 257  QIISADNHEFWFMGFVYYDNAVQSLQQALE 286


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