BLASTX nr result

ID: Coptis23_contig00000685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000685
         (2320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62228.1| hypothetical protein VITISV_008028 [Vitis vinifera]   268   6e-69
emb|CAN67718.1| hypothetical protein VITISV_002357 [Vitis vinifera]   229   3e-57
ref|XP_002310570.1| predicted protein [Populus trichocarpa] gi|2...   222   4e-55
ref|XP_002307093.1| predicted protein [Populus trichocarpa] gi|2...   220   1e-54
ref|XP_002534310.1| conserved hypothetical protein [Ricinus comm...   213   2e-52

>emb|CAN62228.1| hypothetical protein VITISV_008028 [Vitis vinifera]
          Length = 422

 Score =  268 bits (684), Expect = 6e-69
 Identities = 183/426 (42%), Positives = 227/426 (53%), Gaps = 29/426 (6%)
 Frame = +1

Query: 706  NPQQPPPSSLXXXXXXXQNPTSLFDPLSNYFDVFXXXXXXXXXXXXXXLNLDVVWSRNLR 885
            NP QPPP           + +S+FDPLSNYFD                LNLD+VWS+ LR
Sbjct: 3    NPPQPPPPPPHHHHHHHTHSSSMFDPLSNYFDPLSRSPTQLQNPNSL-LNLDMVWSKTLR 61

Query: 886  SEPNSTDMXXXXXXXXXXXXXXXHQDVNRVIIQTPPSSVSLPQGADTSVKASASSS-DPT 1062
            S+PN T++                Q   R    +   S+  P   + + +A+AS+S D T
Sbjct: 62   SDPNCTEIGGILASSSSTPPFSGAQGQIRATFPSSLPSMPFPPAPENAARATASASNDQT 121

Query: 1063 NVXXXXXXXXXXXXXXXXXVLTTDTSNFRAMVQEFTGIXXXXXXXXXXXXXXLDLFSTAS 1242
            NV                 VLTTDT+NFRAMVQEFTGI              LDLF TAS
Sbjct: 122  NVARNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAQPFTSSPFPRSRLDLFGTAS 181

Query: 1243 TMRSGHLEPNRPPPYLLRPFAQK--PSPFAS-----------SNMPPGIAXXXXXXXXXX 1383
            TMRSGHL+ + PP YLLRPFAQK  P PFAS           S+M   IA          
Sbjct: 182  TMRSGHLD-HAPPSYLLRPFAQKLQPPPFASPPPSSSSSFSSSSMVDAIASTTNITSGSA 240

Query: 1384 XXXXXXXXX--YQLLSELGLSKQSQNLVNM--QNPLLTFQSLLQSTIPPKYPSPNSSGFG 1551
                       YQL S+LGL KQ QNL+NM  QNP+L+ QS LQ+  P KYP PNS+  G
Sbjct: 241  SNTSSNSTSINYQLPSDLGLVKQPQNLLNMNVQNPILSIQSFLQT--PLKYPHPNSAIMG 298

Query: 1552 DNSQGIL------SNTRMGTLDEFNMNHGQVRTHLNELPNFGTSD--GMRNDNNFASNCG 1707
               QG L      S+ +MG L++F ++HG V THL+ LPN  +SD    R+DNN  S   
Sbjct: 299  SKPQGSLEIPSTDSHIKMGGLEDFGLSHGHVNTHLSGLPNLVSSDRTASRSDNNPPS-WN 357

Query: 1708 DGVGSNDGDQGQARSFNENYGNSQRANSCKLNFSGSSSH---EKGTENVTSRGGEGMVDS 1878
            DG+GS+ G+ GQ    N NY NSQR  + K+N+S SSS    +K  ENV++R  EGMV+S
Sbjct: 358  DGLGSSGGNHGQLGPLNGNYNNSQRVTNGKMNYSASSSDFHGDKVPENVSTR-SEGMVES 416

Query: 1879 WICSSD 1896
            WICSSD
Sbjct: 417  WICSSD 422


>emb|CAN67718.1| hypothetical protein VITISV_002357 [Vitis vinifera]
          Length = 449

 Score =  229 bits (583), Expect = 3e-57
 Identities = 178/460 (38%), Positives = 221/460 (48%), Gaps = 36/460 (7%)
 Frame = +1

Query: 625  DDEYDSRNESISAFLNPSSSSHVGVLGNPQQPPPSSLXXXXXXXQNPTSLFDPLSNYFDV 804
            D+EY+SR ESI AFLNPS   H G + +  QPPP           +P +LFDP SNY D 
Sbjct: 16   DEEYESRPESIPAFLNPSG--HFGSVSSNPQPPP-----FPHHQNHPPTLFDPRSNYVDA 68

Query: 805  FXXXXXXXXXXXXXXLNLDVVWSRNLRSEPNSTDMXXXXXXXXXXXXXXXHQDVNRVIIQ 984
            F              LNLD VWSR LRSEPN TD                   +    +Q
Sbjct: 69   FSQSSANPNANSL--LNLDTVWSRGLRSEPNCTDFGNLTGLSSSSTSSSGQSMLG---VQ 123

Query: 985  TPPSSVSLPQGADTSVKASASS--SDPTNVXXXXXXXXXXXXXXXXXVLTTDTSNFRAMV 1158
             P          +   +AS++S  SD TNV                 VLTTDTSNFRAMV
Sbjct: 124  GPVH--------ENGGRASSASLPSDQTNVVRSSKKRTRASRRAPTTVLTTDTSNFRAMV 175

Query: 1159 QEFTGIXXXXXXXXXXXXXXLDLFSTASTMRSGHLEPNRPPPYLLRPFAQKPSP--FASS 1332
            QEFTGI              LDLF   S+++ GHLEP   P Y LRP   K  P  F SS
Sbjct: 176  QEFTGIPAPPFSASPYSRR-LDLFGAGSSIKPGHLEP-LGPLYPLRPSPHKVQPNLFVSS 233

Query: 1333 NMPPGIAXXXXXXXXXXXXXXXXXXX-----------------------YQLLSELGLSK 1443
            +  P  +                                          YQL S+ G  K
Sbjct: 234  SSSPSPSFFNSTIGDSIVSTTNIATTSTNNIITTSMAAATNAINSGSNTYQLPSDPGFPK 293

Query: 1444 QSQNLVNMQNPLLTFQSLLQS--TIPPKYPSPNSSGFGDNSQGILSNTRMGTLDEFNMNH 1617
            Q QN++ MQNP+L+FQSLLQS  + P KYP  +   FG  S   L+   + + +E  + H
Sbjct: 294  QPQNVLGMQNPILSFQSLLQSPPSHPLKYPLADVPVFGTKSPASLT-LPLPSFEELGVPH 352

Query: 1618 GQVRTHLNELPNFGTSDG---MRNDNNFASNCG-DGVGSNDGDQGQARSFNENYGNSQRA 1785
            G V  +++ LP+  TS G   +R D+N    C  DG GSN+G + Q R FN NYG+S + 
Sbjct: 353  GHVNANISGLPSHATSGGSRRLRTDDN--GTCWRDGAGSNEGSREQLRPFNGNYGDSPQV 410

Query: 1786 NSCKLNFSGSSS---HEKGTENVTSRGGEGMVDSWICSSD 1896
            +S KLN S SSS    EKG++NV+SR GEG VDSWIC SD
Sbjct: 411  SSFKLNCSASSSAFHPEKGSDNVSSR-GEGTVDSWICPSD 449


>ref|XP_002310570.1| predicted protein [Populus trichocarpa] gi|222853473|gb|EEE91020.1|
            predicted protein [Populus trichocarpa]
          Length = 527

 Score =  222 bits (565), Expect = 4e-55
 Identities = 188/496 (37%), Positives = 234/496 (47%), Gaps = 76/496 (15%)
 Frame = +1

Query: 625  DDEYDSRNESISAFLNPSSS--SHVGVLGN--PQQPPPSSLXXXXXXXQNPTSLFDPLSN 792
            D+EYDSR ESISAFLN +++  SHVG + +  P QP             + T LFDPLSN
Sbjct: 16   DEEYDSRAESISAFLNNNNNPLSHVGPMSSNPPPQPEHHHHHQTHHSSSSSTMLFDPLSN 75

Query: 793  YFDVFXXXXXXXXXXXXXX----LNLDVVWSRNLRSEPNSTDMXXXXXXXXXXXXXXXHQ 960
            YFD                    LNLD+VWS+NLRSEPN TD+               +Q
Sbjct: 76   YFDPLSSASSRSPPPPFTNPNSLLNLDMVWSKNLRSEPNCTDLGGFISSSSPTQQLFTNQ 135

Query: 961  DVNRVIIQTPPSSVSLPQGADTSVKASASSSDP----TNVXXXXXXXXXXXXXXXXXVLT 1128
               R   Q+ P     P G +++ +   S ++     T                   VLT
Sbjct: 136  TQTRTTFQSLP-----PHGHESATRGPVSGTNDQVSNTAGVRNPKKRSRASRRAPTTVLT 190

Query: 1129 TDTSNFRAMVQEFTGIXXXXXXXXXXXXXXLDLFST-ASTMRSG---HLEPNRPPPYLLR 1296
            TDT+NFRAMVQEFTGI              LDLF T AST+RS    HL+P+ PPPYLLR
Sbjct: 191  TDTTNFRAMVQEFTGIPAPPFTSSPFPRSRLDLFGTAASTLRSAVSHHLDPS-PPPYLLR 249

Query: 1297 PFAQK-------PSPFASS---------NMPPGIA---------XXXXXXXXXXXXXXXX 1401
            PFAQ+         PFASS         +M   IA                         
Sbjct: 250  PFAQRFQPPPPPAPPFASSGSTASSFSTSMVDAIASTTTTNINNSGACTNSTTTSNISST 309

Query: 1402 XXXYQLLSELGLSKQSQNL--VNMQNPLLTFQSLLQSTIPPKYPSPNSS---GFGDNSQG 1566
               YQL S+LGL KQ  +L  +N+QNP+L F  L Q+  P KYP PNS+   G     QG
Sbjct: 310  SINYQLPSDLGLLKQPHHLLNINVQNPILNFHPLFQA--PHKYPLPNSTNILGTTKAQQG 367

Query: 1567 IL-------SNTRMGTLDEFNMNHGQVRTHLNELPNFGTSDG--------MR--NDNNFA 1695
                     S+ +MG L+EF M+HG V T+L  L N  +S          MR  + NN  
Sbjct: 368  SSLEIPSNDSHLKMGVLEEFGMSHGHVSTNLTGLQNIVSSSSSPSADATLMRRGDHNNNL 427

Query: 1696 SNCGDGVGSNDG-------DQGQARSFNENYGNS-QRANSCKLNFSGSSSHE-----KGT 1836
            +N GDGVGSN+G        QG  RS N NY NS QR  + K+NF  SSS +     KG 
Sbjct: 428  ANWGDGVGSNEGGHHHHQQQQGLLRSINGNYNNSTQRVTNGKVNFLASSSSDFRGDNKGQ 487

Query: 1837 ENVTSRGGEGMVDSWI 1884
            ENV +R  E + D+ I
Sbjct: 488  ENVATRSEEVVNDNEI 503


>ref|XP_002307093.1| predicted protein [Populus trichocarpa] gi|222856542|gb|EEE94089.1|
            predicted protein [Populus trichocarpa]
          Length = 510

 Score =  220 bits (560), Expect = 1e-54
 Identities = 191/503 (37%), Positives = 237/503 (47%), Gaps = 79/503 (15%)
 Frame = +1

Query: 625  DDEYDS-RNESISAFLNPSSS-----SHVGVLGNPQQPPPSSLXXXXXXXQNPTSLF-DP 783
            D+EYDS R ESISAFLN +++     SHVG + + Q P P           + +++F DP
Sbjct: 16   DEEYDSSRAESISAFLNSNNNKNNPFSHVGPMPHNQPPEPDHHHHQSHHSSSSSTMFFDP 75

Query: 784  LSNYFDVFXXXXXXXXXXXXXXLN------LDVVWSRNLRSEPNSTDMXXXXXXXXXXXX 945
             SNYFD                 N      LD+VWS+NLRS+PN TD+            
Sbjct: 76   FSNYFDPLAPSSSSSRSPLQSLTNPNSLNNLDMVWSKNLRSDPNCTDLGGFISSSLPTQQ 135

Query: 946  XXXHQDVNRVIIQTPPSSVSLPQGADTSVKASASSSDP------TNVXXXXXXXXXXXXX 1107
               +Q  NR   Q+ PS     Q + T V  S S S        T               
Sbjct: 136  FT-NQTQNRTTFQSLPSH---GQESATRVPGSGSVSGTNDQVSNTAGIRNPKKRSRASRR 191

Query: 1108 XXXXVLTTDTSNFRAMVQEFTGIXXXXXXXXXXXXXXLDLFSTA-STMRSG---HLEPNR 1275
                VL+TDT+NFRAMVQEFTGI              LDLF TA ST+RS    HL+P+ 
Sbjct: 192  APTTVLSTDTTNFRAMVQEFTGIPAPPFTSSPFPRSRLDLFGTAASTLRSAVSQHLDPS- 250

Query: 1276 PPPYLLRPFAQK-----PSPFASS---------NMPPGIAXXXXXXXXXXXXXXXXXXX- 1410
            PPPYLL PFA+K     P PF SS         +M   IA                    
Sbjct: 251  PPPYLLGPFAKKFQPPPPPPFVSSGSAASSFSASMVDAIASTTATNINGTCTNTTISNNI 310

Query: 1411 ------YQLLSELGLSKQSQNLVNM--QNPLLTFQSLLQSTIPPKYP---SPNSSGFGDN 1557
                  YQL S+LGL KQ  NL+N+  QNP+L F  LLQ+  PPKYP   SPN  G    
Sbjct: 311  PLTSINYQLPSDLGLLKQPHNLLNLNVQNPILNFHPLLQA--PPKYPLPDSPNILGTTKP 368

Query: 1558 SQGIL------SNTRMGTLDEFNMNHGQVRTHLNELPNFGTSDGMRND---------NNF 1692
             QG L      S+ +M  L+EF +NHG V T+L+ L N  +S     D         +N 
Sbjct: 369  QQGSLEIPLNVSHLKMVVLEEFGLNHGHVNTNLSGLQNIVSSSSPSADVTLVRRSDHSNS 428

Query: 1693 ASNCGDGVGSNDGD---------QGQARSFNENYGNS-QRANSCKLNFSGSSS-----HE 1827
             +N GDG GSN+ D         QG  RS N +Y NS QR  + K+NF  SSS     H+
Sbjct: 429  LTNWGDGAGSNEVDHHHHQQQQQQGLLRSINGDYNNSTQRVTNGKVNFLASSSDFCGDHK 488

Query: 1828 KGTENVTSRGGEGMVDSWICSSD 1896
             G ENV +R  EG ++SWICSSD
Sbjct: 489  LGQENVATR-SEGTMESWICSSD 510


>ref|XP_002534310.1| conserved hypothetical protein [Ricinus communis]
            gi|223525518|gb|EEF28072.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 498

 Score =  213 bits (541), Expect = 2e-52
 Identities = 185/491 (37%), Positives = 228/491 (46%), Gaps = 67/491 (13%)
 Frame = +1

Query: 625  DDEYDSRNES-ISAFLNPSSSS----HVGVLGNPQQPPPSSLXXXXXXXQNPTSLFDPLS 789
            DDEYDSR ES ISAFLN S+++    HVG + NP  PPP          Q   S+FDPLS
Sbjct: 15   DDEYDSRAESSISAFLNHSNNNNPLTHVGPMPNPPPPPPDH---HHHQHQTHHSMFDPLS 71

Query: 790  NYFD-VFXXXXXXXXXXXXXXLNLDVVWSRNLRSEPNSTDMXXXXXXXXXXXXXXXHQDV 966
            NYFD +               LNLD+VWS+NLRS+ N TD+                   
Sbjct: 72   NYFDPLSSSRPPPPLTHPNSLLNLDMVWSKNLRSDTNCTDLGGFIATSSSPTQQFFTNQT 131

Query: 967  N-----RVIIQTPP-SSVSLPQGADTSVKASASS------SDPTNVXXXXXXXXXXXXXX 1110
                     IQ PP    + P     S  AS S+      +  TN+              
Sbjct: 132  QTGPTYNPSIQIPPVQETTAPSRGPGSASASGSNGHQTNNTTTTNIVRNPKKRSRASRRA 191

Query: 1111 XXXVLTTDTSNFRAMVQEFTGIXXXXXXXXXXXXXXLDLFST--ASTMRS--GHLEPNRP 1278
               VLTTDT+NFRAMVQEFTGI              LDLF T  AS++RS   HLEP+  
Sbjct: 192  PTTVLTTDTTNFRAMVQEFTGIPAPPFTSSPFPRSRLDLFGTAAASSLRSVVSHLEPSH- 250

Query: 1279 PPYLLRPFAQKPSP-----FASSNMPPGIAXXXXXXXXXXXXXXXXXXXYQLL-SELGLS 1440
            P YLLRPFAQK  P      +SS+M   IA                        S+L L 
Sbjct: 251  PSYLLRPFAQKIQPPFLSSSSSSSMIDAIASSTTTSTNINSNATTNTTTNTTSNSDLSLL 310

Query: 1441 KQSQNLVNM---QNPLLTFQSLLQSTIPPKYPSPNSSGFGDNSQ-GILS------NTRMG 1590
            K  QNL+N+    +P+L F SL Q +  PKY  PNSS      Q G L       + +MG
Sbjct: 311  KYPQNLLNINMHNSPMLNFHSLFQPS--PKYSLPNSSILATKPQEGSLDTPSNDPHLKMG 368

Query: 1591 TLDEFNMNHGQVRTHLNELPNF-------------GTSDGMRNDNNFASNCGD-GVGSND 1728
             L+EF ++HG V T+L  L N               +S    N+NN + N GD  VGSN+
Sbjct: 369  VLEEFGLSHGHVSTNLTGLHNLVSSSDTTLRRSDHNSSSSSNNNNNNSGNWGDRRVGSNE 428

Query: 1729 GDQGQARSFNENYGNSQR--------ANSCKLNFSGSSSH----EKGTEN---VTSRGGE 1863
            GD    RS N NY N+          AN+ K+N+S SSS     +KG E    V +   E
Sbjct: 429  GDH-LLRSINGNYNNNNSSSNTQRVVANNGKVNYSASSSDFNHGDKGPETNVVVANTRSE 487

Query: 1864 GMVDSWICSSD 1896
            GMV+SWICSSD
Sbjct: 488  GMVESWICSSD 498


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