BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000681
         (1981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPa...   589   e-166
ref|XP_002514929.1| GTP binding protein, putative [Ricinus commu...   588   e-165
ref|XP_002279434.1| PREDICTED: putative ribosome biogenesis GTPa...   582   e-163
ref|XP_003551427.1| PREDICTED: putative ribosome biogenesis GTPa...   569   e-159
ref|XP_003538555.1| PREDICTED: putative ribosome biogenesis GTPa...   563   e-158

>ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Cucumis
            sativus] gi|449489232|ref|XP_004158254.1| PREDICTED:
            putative ribosome biogenesis GTPase RsgA-like [Cucumis
            sativus]
          Length = 504

 Score =  589 bits (1519), Expect = e-166
 Identities = 295/390 (75%), Positives = 336/390 (86%), Gaps = 20/390 (5%)
 Frame = -2

Query: 1593 NQAIGMVSSAQANYMRVVV---------------EKAAPTENTSS--SIVGVELLCVVRA 1465
            +QAIG V++AQAN+MRV+V               E++   E+ SS  S++GVELLCVV+A
Sbjct: 88   SQAIGTVAAAQANFMRVIVQTLPSQFSQSPNDDLERSGSLEDDSSKSSMLGVELLCVVKA 147

Query: 1464 VLKKIKRRVLVGDKVLVSSIDWVDKRGMIENVFERSSEILDPPVANVDHLLVLFSFEQPK 1285
            VLKKIKRRVLVGDKV+V SIDWVD+RGMIENVF+RSSEILDPPVANVDHLLVLFS +QP+
Sbjct: 148  VLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQRSSEILDPPVANVDHLLVLFSMDQPR 207

Query: 1284 VESFSLTRFLVEAESTGIPVTLALNKSELVDEETQVAWKAKLRKWGYQPLFCSVESGVGL 1105
            +E F+LTRFLVEAESTGIP+TL LNK ELVDEET V+WK++LR WGY PLFCSV++G GL
Sbjct: 208  LEPFTLTRFLVEAESTGIPLTLGLNKLELVDEETLVSWKSRLRSWGYDPLFCSVQTGAGL 267

Query: 1104 DSLAFILREQTSVIVGPSGVGKSSLINALRGSKHGPEE---DNWLSRIEGSKWFEDQRVG 934
            DSLAFILR+QT+VIVGPSGVGKSSLINALR S    +    DNW   I GSKWFE+QRV 
Sbjct: 268  DSLAFILRDQTTVIVGPSGVGKSSLINALRNSNRATDASDTDNWFDPILGSKWFEEQRVA 327

Query: 933  EVSIRSGRGKHTTRHVSLLPLSGGGFLADTPGFNQPSLMRVTKKSLAQMFPEIRKMLSTS 754
            EVS RSGRGKHTTRHVSLLPLSGGG+LADTPGFNQPSLM++TK+SLAQ FPEI+KML  S
Sbjct: 328  EVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLMKITKQSLAQAFPEIQKMLHAS 387

Query: 753  DPAKCSFSDCLHLGEPGCVVKGDWERYAYYLQLLDEIKIREEFQLRTLGTKRESDVRYKV 574
            +PAKCSF+DCLHLGEPGCV+KGDWERY YY QLLDEI+IREEFQLRT GTKRE DVR KV
Sbjct: 388  EPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQLLDEIRIREEFQLRTFGTKREGDVRIKV 447

Query: 573  GDMGVKQAEPRLELKKHRRQSRKRINQSVI 484
            G+MGVKQAEPRLELKKHRRQSRKR+NQS++
Sbjct: 448  GEMGVKQAEPRLELKKHRRQSRKRVNQSIL 477


>ref|XP_002514929.1| GTP binding protein, putative [Ricinus communis]
            gi|223545980|gb|EEF47483.1| GTP binding protein, putative
            [Ricinus communis]
          Length = 500

 Score =  588 bits (1517), Expect = e-165
 Identities = 289/380 (76%), Positives = 334/380 (87%), Gaps = 10/380 (2%)
 Frame = -2

Query: 1593 NQAIGMVSSAQANYMRVVVEKAAPTENT-------SSSIVGVELLCVVRAVLKKIKRRVL 1435
            +QA+G V++AQAN+MRV+++   P+  T         S +GVELLCVVRAVLKKI+RRVL
Sbjct: 92   SQAVGTVAAAQANFMRVIIQSLPPSSGTFLKSPEEEDSRIGVELLCVVRAVLKKIRRRVL 151

Query: 1434 VGDKVLVSSIDWVDKRGMIENVFERSSEILDPPVANVDHLLVLFSFEQPKVESFSLTRFL 1255
            VGDKV+V SIDWVD+RGMIENVF+RS+EILDPPVANVDHLLVLFS +QPK+E F+LTRFL
Sbjct: 152  VGDKVVVGSIDWVDRRGMIENVFQRSTEILDPPVANVDHLLVLFSMDQPKIEPFALTRFL 211

Query: 1254 VEAESTGIPVTLALNKSELVDEETQVAWKAKLRKWGYQPLFCSVESGVGLDSLAFILREQ 1075
            VEAESTGIP+TLALNKSELVDEET +AWK++LR WGY+PLFCSVES +GLDSLA+ILREQ
Sbjct: 212  VEAESTGIPLTLALNKSELVDEETLIAWKSRLRSWGYEPLFCSVESKLGLDSLAYILREQ 271

Query: 1074 TSVIVGPSGVGKSSLINALRGSKHG---PEEDNWLSRIEGSKWFEDQRVGEVSIRSGRGK 904
            T+VIVGPSGVGKSSLINALR         E DNW   + GSKWFE+QRVGEVS RSGRGK
Sbjct: 272  TTVIVGPSGVGKSSLINALRNKPRACDVAENDNWFDPMLGSKWFEEQRVGEVSTRSGRGK 331

Query: 903  HTTRHVSLLPLSGGGFLADTPGFNQPSLMRVTKKSLAQMFPEIRKMLSTSDPAKCSFSDC 724
            HTTR+VSLLPLS GG+LADTPGFNQPSL++VTK+SLA+ FPEI+KMLS+  PAKCSF+DC
Sbjct: 332  HTTRNVSLLPLSAGGYLADTPGFNQPSLLKVTKQSLAETFPEIQKMLSSGGPAKCSFNDC 391

Query: 723  LHLGEPGCVVKGDWERYAYYLQLLDEIKIREEFQLRTLGTKRESDVRYKVGDMGVKQAEP 544
            LHLGEPGC+V GDWERY++Y QLLDEI+IREEFQLRT GTK+E DVRYKVGDMGV+QAEP
Sbjct: 392  LHLGEPGCIVNGDWERYSFYFQLLDEIRIREEFQLRTYGTKKEGDVRYKVGDMGVQQAEP 451

Query: 543  RLELKKHRRQSRKRINQSVI 484
            RLE KKHRRQSRKRINQS++
Sbjct: 452  RLEPKKHRRQSRKRINQSLL 471


>ref|XP_002279434.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like isoform 3
            [Vitis vinifera]
          Length = 491

 Score =  582 bits (1501), Expect = e-163
 Identities = 312/463 (67%), Positives = 350/463 (75%), Gaps = 19/463 (4%)
 Frame = -2

Query: 1815 MSISLTSIFRYRLSLSLPILHLKKTCS---TIITSARQDPNPYRKLQSNKXXXXXXXXXX 1645
            M I+ TSIFRY    SL +L      S       +  Q+P   +    N           
Sbjct: 1    MPIASTSIFRYSNPSSLLLLRRGAAASFRHLSFVAKHQNPISRKPQNKNLLRAKQTVKHL 60

Query: 1644 XXXXXXXXXXXXXXXXTNQAIGMVSSAQANYMRVVVEKAAPTENTSSSI---------VG 1492
                              +A+GMV++AQAN+MRV+VE +   +               VG
Sbjct: 61   SSLSPTLPVNHRPLLSATEAVGMVAAAQANFMRVIVEDSRVEDGDGGGDGDGDGDAVRVG 120

Query: 1491 VELLCVVRAVLKKIKRRVLVGDKVLVSSIDWVDKRGMIENVFERSSEILDPPVANVDHLL 1312
            VELLCVVRAVLKKIKRRVLVGDKVLV SIDWVD+RG+IENVF R SEILDPPVANVDHLL
Sbjct: 121  VELLCVVRAVLKKIKRRVLVGDKVLVGSIDWVDRRGVIENVFSRKSEILDPPVANVDHLL 180

Query: 1311 VLFSFEQPKVESFSLTRFLVEAESTGIPVTLALNKSELVDEETQVAWKAKLRKWGYQPLF 1132
            VLF+ EQPK+E +SLTRFLVEAESTGIP+TLALNKSELVDEET+VAWK++LR WGY P+F
Sbjct: 181  VLFAMEQPKLEVYSLTRFLVEAESTGIPITLALNKSELVDEETRVAWKSRLRSWGYGPVF 240

Query: 1131 CSVESGVGLDSLAFILREQTSVIVGPSGVGKSSLINALRGSKH-----GPEEDNWLSRIE 967
            CSVES  GLD+LAF LREQT+VIVGPSGVGKSSLINALR S H       EE+NW   I 
Sbjct: 241  CSVESKFGLDTLAFSLREQTTVIVGPSGVGKSSLINALR-SNHPLINVSSEENNWFDSIL 299

Query: 966  GSKWFEDQRVGEVSIRSGRGKHTTRHVSLLPLSGGGFLADTPGFNQPSLMRVTKKSLAQM 787
            GSK  E+QRVGEVS+RSGRGKHTTRHVSLLPLSGGG+LADTPGFNQPSL++VT +SLAQ 
Sbjct: 300  GSKLLEEQRVGEVSVRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTTQSLAQT 359

Query: 786  FPEIRKMLSTS--DPAKCSFSDCLHLGEPGCVVKGDWERYAYYLQLLDEIKIREEFQLRT 613
            FPEIRK+LS S  +P KCSF+DCLHLGEPGCVVKGDWERY YY QLLDEIKIREEFQLRT
Sbjct: 360  FPEIRKLLSGSANEPEKCSFNDCLHLGEPGCVVKGDWERYPYYFQLLDEIKIREEFQLRT 419

Query: 612  LGTKRESDVRYKVGDMGVKQAEPRLELKKHRRQSRKRINQSVI 484
            LGTKRE DVRYK GDMGVKQAEPRLE KKHRRQSRKR+NQS++
Sbjct: 420  LGTKREGDVRYKTGDMGVKQAEPRLEPKKHRRQSRKRMNQSIL 462


>ref|XP_003551427.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Glycine
            max]
          Length = 473

 Score =  569 bits (1466), Expect = e-159
 Identities = 284/371 (76%), Positives = 324/371 (87%), Gaps = 1/371 (0%)
 Frame = -2

Query: 1593 NQAIGMVSSAQANYMRVVVEKAAPTENTSSSIVGVELLCVVRAVLKKIKRRVLVGDKVLV 1414
            +QAIG+V+++QAN+MRV+V +    +  S S  GVE+LCVVRA+LKKIKRRV+VGDKVLV
Sbjct: 79   SQAIGVVAASQANFMRVIVPE---NDEPSGSFRGVEILCVVRALLKKIKRRVMVGDKVLV 135

Query: 1413 SSIDWVDKRGMIENVFERSSEILDPPVANVDHLLVLFSFEQPKVESFSLTRFLVEAESTG 1234
             SIDWVD+RGMIENVF R+SEILDPPVANVD LLVLFS EQPK E F+LTRFLVEAESTG
Sbjct: 136  GSIDWVDRRGMIENVFHRTSEILDPPVANVDQLLVLFSLEQPKPEPFTLTRFLVEAESTG 195

Query: 1233 IPVTLALNKSELVDEETQVAWKAKLRKWGYQPLFCSVESGVGLDSLAFILREQTSVIVGP 1054
            IP+TLALNK+ELVD E   +WKA+LR WGY+P+FCSVESG GLD L F LR+QT+VIVGP
Sbjct: 196  IPLTLALNKTELVDNEIISSWKARLRSWGYEPVFCSVESGHGLDLLGFKLRDQTTVIVGP 255

Query: 1053 SGVGKSSLINALRGS-KHGPEEDNWLSRIEGSKWFEDQRVGEVSIRSGRGKHTTRHVSLL 877
            SGVGKSSLINALR +  +  E +NW   + GSKW EDQRVGEVS RSGRGKHTTRHVSLL
Sbjct: 256  SGVGKSSLINALRSNPSNAAEGENWFEPVLGSKWLEDQRVGEVSTRSGRGKHTTRHVSLL 315

Query: 876  PLSGGGFLADTPGFNQPSLMRVTKKSLAQMFPEIRKMLSTSDPAKCSFSDCLHLGEPGCV 697
            PLS GGFLADTPGFNQPSL++VTK+SLAQ FPEIRKMLS S+  KCSF++CLHLGEPGC+
Sbjct: 316  PLSEGGFLADTPGFNQPSLLKVTKQSLAQTFPEIRKMLSASEIEKCSFNNCLHLGEPGCI 375

Query: 696  VKGDWERYAYYLQLLDEIKIREEFQLRTLGTKRESDVRYKVGDMGVKQAEPRLELKKHRR 517
            VKGDWERY+YY QLLDEI+IREEFQLRT GTKRE DVR K+GDMGV+QAEPRLE KKHRR
Sbjct: 376  VKGDWERYSYYFQLLDEIRIREEFQLRTFGTKREGDVRLKMGDMGVQQAEPRLEPKKHRR 435

Query: 516  QSRKRINQSVI 484
            QSRKRINQS++
Sbjct: 436  QSRKRINQSIL 446


>ref|XP_003538555.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Glycine
            max]
          Length = 475

 Score =  563 bits (1450), Expect = e-158
 Identities = 281/371 (75%), Positives = 321/371 (86%), Gaps = 1/371 (0%)
 Frame = -2

Query: 1593 NQAIGMVSSAQANYMRVVVEKAAPTENTSSSIVGVELLCVVRAVLKKIKRRVLVGDKVLV 1414
            +QAIG+V+++QAN+MRV+V +    +  S S  GVE+LCVVRA+LKKIKRRV+VGDKVLV
Sbjct: 83   SQAIGVVAASQANFMRVIVPE---NDEPSGSFRGVEILCVVRALLKKIKRRVMVGDKVLV 139

Query: 1413 SSIDWVDKRGMIENVFERSSEILDPPVANVDHLLVLFSFEQPKVESFSLTRFLVEAESTG 1234
             SIDWVD+RGMIENVF+R+SEILDPPVANVD LLVLFS E PK E F+LTRFLVEAESTG
Sbjct: 140  GSIDWVDRRGMIENVFQRTSEILDPPVANVDQLLVLFSLEHPKPEPFTLTRFLVEAESTG 199

Query: 1233 IPVTLALNKSELVDEETQVAWKAKLRKWGYQPLFCSVESGVGLDSLAFILREQTSVIVGP 1054
            IP+ LALNK+ELVD E   +WKA+LR WGY+P+FCSVESG GLD L + LR+QT+VIVGP
Sbjct: 200  IPLMLALNKTELVDNEIISSWKARLRSWGYEPVFCSVESGHGLDLLGYKLRDQTTVIVGP 259

Query: 1053 SGVGKSSLINALRGS-KHGPEEDNWLSRIEGSKWFEDQRVGEVSIRSGRGKHTTRHVSLL 877
            SGVGKSSLINALR +     E DNW   I GSKW EDQRVGEVS RSGRGKHTTRHVSLL
Sbjct: 260  SGVGKSSLINALRSNPSDAAEGDNWFEPILGSKWLEDQRVGEVSTRSGRGKHTTRHVSLL 319

Query: 876  PLSGGGFLADTPGFNQPSLMRVTKKSLAQMFPEIRKMLSTSDPAKCSFSDCLHLGEPGCV 697
            PLS GGFLADTPGFNQPSL++VTK+SLAQ FPEIRKMLS ++  KCSF++CLHLGEPGC+
Sbjct: 320  PLSEGGFLADTPGFNQPSLLKVTKQSLAQTFPEIRKMLSANETEKCSFNNCLHLGEPGCI 379

Query: 696  VKGDWERYAYYLQLLDEIKIREEFQLRTLGTKRESDVRYKVGDMGVKQAEPRLELKKHRR 517
            VKGDWERY+YY QLLDEI+IREEFQLRT GTKRE DVR K+GDMGV+QAEPRLE KKHRR
Sbjct: 380  VKGDWERYSYYFQLLDEIRIREEFQLRTFGTKREGDVRLKMGDMGVQQAEPRLEPKKHRR 439

Query: 516  QSRKRINQSVI 484
            QSRK INQS++
Sbjct: 440  QSRKSINQSIL 450