BLASTX nr result

ID: Coptis23_contig00000677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000677
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichoca...    74   1e-11
gb|ABV29168.1| disease resistance protein R3a-like protein [Sola...    74   1e-11
gb|ABV29175.1| disease resistance protein R3a-like protein [Sola...    74   2e-11
gb|AAU90287.1| Putative disease resistance protein I2C-5, identi...    74   2e-11
ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trich...    73   3e-11

>ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859577|gb|EEE97124.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 799

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
 Frame = +2

Query: 5   FKHIALRE-IQDDREKFEEIGKKIAGKCKGVPLAVKIIASVMRHKRSVVEWKDVLASNIW 181
           F H+A +E  +D+RE+  +IG+KIA KCKG+PLA K++  +M+ KR+  EW+ VL+S +W
Sbjct: 252 FNHVAFQERSKDERERLTDIGEKIASKCKGLPLAAKVLGGLMQFKRTREEWERVLSSELW 311

Query: 182 EEMSKDEHEFXXXXXXXXXXXXXXXKQCFSYCA 280
            E+   E                  ++CF YCA
Sbjct: 312 -ELEHVERRLFPPLLLSYYDLPYVERRCFLYCA 343


>gb|ABV29168.1| disease resistance protein R3a-like protein [Solanum demissum]
          Length = 692

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/93 (38%), Positives = 52/93 (55%)
 Frame = +2

Query: 2   FFKHIALREIQDDREKFEEIGKKIAGKCKGVPLAVKIIASVMRHKRSVVEWKDVLASNIW 181
           F +H       ++  +FEE+GK+IA KCKG+PLA+K +A ++R K  V EW+D+L S IW
Sbjct: 123 FQRHSLENRDPEEHPEFEEVGKQIADKCKGLPLALKALAGILRGKSEVDEWRDILRSEIW 182

Query: 182 EEMSKDEHEFXXXXXXXXXXXXXXXKQCFSYCA 280
            E+    +                 KQCF+YCA
Sbjct: 183 -ELPSYSNGILPALMLSYNDLPAHLKQCFAYCA 214


>gb|ABV29175.1| disease resistance protein R3a-like protein [Solanum demissum]
          Length = 1051

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
 Frame = +2

Query: 5   FKHIALREIQDDRE--KFEEIGKKIAGKCKGVPLAVKIIASVMRHKRSVVEWKDVLASNI 178
           FK  +L E +D +E  +FEE+GK+IA KCKG+PLA+K +A ++R K  V EW+D+L S I
Sbjct: 336 FKRHSL-ENRDPKENPEFEEVGKQIADKCKGLPLALKALAGILRGKSEVNEWRDILRSEI 394

Query: 179 WEEMSKDEHEFXXXXXXXXXXXXXXXKQCFSYCA 280
           W E+S   +                 KQCF+YCA
Sbjct: 395 W-ELSICSNGILPALMLSYNDLPARLKQCFAYCA 427


>gb|AAU90287.1| Putative disease resistance protein I2C-5, identical [Solanum
           demissum]
          Length = 1255

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
 Frame = +2

Query: 5   FKHIALREIQDDRE--KFEEIGKKIAGKCKGVPLAVKIIASVMRHKRSVVEWKDVLASNI 178
           FK  +L E +D +E  +FEE+GK+IA KCKG+PLA+K +A ++R K  V EW+D+L S I
Sbjct: 343 FKRHSL-ENRDPKENPEFEEVGKQIADKCKGLPLALKALAGILRGKSEVNEWRDILRSEI 401

Query: 179 WEEMSKDEHEFXXXXXXXXXXXXXXXKQCFSYCA 280
           W E+S   +                 KQCF+YCA
Sbjct: 402 W-ELSICSNGILPALMLSYNDLPARLKQCFAYCA 434


>ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859580|gb|EEE97127.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 945

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
 Frame = +2

Query: 5   FKHIALRE-IQDDREKFEEIGKKIAGKCKGVPLAVKIIASVMRHKRSVVEWKDVLASNIW 181
           F H+A +E  +D+RE+  +IG KIA KCKG+PLA K++  +M+ KR+  EW+ VL+S +W
Sbjct: 342 FNHVAFQERSEDERERLTDIGDKIANKCKGLPLAAKVLGGLMQSKRTREEWERVLSSELW 401

Query: 182 --EEMSKD--EHEFXXXXXXXXXXXXXXXKQCFSYCA 280
             +E+ +D  E                  ++CF YCA
Sbjct: 402 RLDEVDRDQVESRIFIPLLLSYYDLPSVVRRCFLYCA 438


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