BLASTX nr result

ID: Coptis23_contig00000676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000676
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267795.1| PREDICTED: putative disease resistance prote...   104   6e-21
ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trich...    99   4e-19
gb|ADU57957.1| disease resistance protein CYR1 [Vigna mungo]           98   6e-19
gb|ADU57969.1| disease resistance protein CYR1 [Vigna mungo]           98   6e-19
ref|XP_002332101.1| cc-nbs-lrr resistance protein [Populus trich...    98   6e-19

>ref|XP_002267795.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 928

 Score =  104 bits (260), Expect = 6e-21
 Identities = 52/126 (41%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
 Frame = +2

Query: 2   RDENIAEKMASTYIHRLGQLSDEECWSFFKHIALR-EIQDNREKFEEIGKKIAWKCKGVP 178
           R+EN++  M +TY H LG+LS E+CWS F +IA     ++  E+ E IG+KIA KC+G+P
Sbjct: 312 RNENVSTMMGTTYKHPLGELSKEQCWSLFSNIAFYGRSREKVEELENIGRKIADKCRGLP 371

Query: 179 LAVKIIASLMCRKRSVVEWEDVLASDIWEVMSEDEHGFXXXXXXXXXXXXXXXKRCFSYC 358
           LA K++ SLM  K +  +WE +L ++IW++   ++H                 KRCFSYC
Sbjct: 372 LAAKVLGSLMRLKDNKEDWESILNNEIWQLDVIEKH-LSTPLLLSYYDLSPAVKRCFSYC 430

Query: 359 AIFRED 376
           A+F +D
Sbjct: 431 AVFPKD 436


>ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222868811|gb|EEF05942.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 987

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
 Frame = +2

Query: 2   RDENIAEKMASTYIHRLGQLSDEECWSFFKHIALR-EIQDNREKFEEIGKKIAWKCKGVP 178
           R + +A+ M S Y   LG+L+DEECWS F  +A     QD  E F EIG++I ++CKG+P
Sbjct: 340 RKDTVAKMMESDYSLLLGKLTDEECWSVFSQVAFYGRSQDACEMFTEIGRQIVYRCKGLP 399

Query: 179 LAVKIIASLMCRKRSVVEWEDVLASDIWEVMSEDEHGFXXXXXXXXXXXXXXXKRCFSYC 358
           LA K +  LM  K +  +W+++L++++WE+  E E G                + CF+YC
Sbjct: 400 LAAKTLGGLMQSKTTTEDWDNILSNELWEI-EEVEKGIFPPLLLSYYDLPVAIRSCFTYC 458

Query: 359 AIFRED 376
           A+F +D
Sbjct: 459 AMFPKD 464


>gb|ADU57957.1| disease resistance protein CYR1 [Vigna mungo]
          Length = 1176

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/128 (39%), Positives = 75/128 (58%), Gaps = 1/128 (0%)
 Frame = +2

Query: 2   RDENIAEKMASTYIHRLGQLSDEECWSFFKHIALREIQ-DNREKFEEIGKKIAWKCKGVP 178
           RDE +A  M S  +HRL QL ++ECW  F+  A ++   +  ++ +EIG +I  KCKG+P
Sbjct: 319 RDEKVASNMQSK-VHRLKQLREDECWKVFEKHASKDYNIELNDELKEIGSRIVDKCKGLP 377

Query: 179 LAVKIIASLMCRKRSVVEWEDVLASDIWEVMSEDEHGFXXXXXXXXXXXXXXXKRCFSYC 358
           LA+K I  L+  K S+ +W+ VL SDIW++ +ED                   KRCF+YC
Sbjct: 378 LALKTIGCLLRTKSSISDWKSVLVSDIWDLPNEDNE-IIPALFLSYHHLPSHLKRCFAYC 436

Query: 359 AIFREDAE 382
           A+F +D E
Sbjct: 437 ALFPKDYE 444


>gb|ADU57969.1| disease resistance protein CYR1 [Vigna mungo]
          Length = 411

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/128 (39%), Positives = 75/128 (58%), Gaps = 1/128 (0%)
 Frame = +2

Query: 2   RDENIAEKMASTYIHRLGQLSDEECWSFFKHIALREIQ-DNREKFEEIGKKIAWKCKGVP 178
           RDE +A  M S  +HRL QL ++ECW  F+  A ++   +  ++ +EIG +I  KCKG+P
Sbjct: 110 RDEKVASNMQSK-VHRLKQLREDECWKVFEKHASKDYNIELNDELKEIGSRIVDKCKGLP 168

Query: 179 LAVKIIASLMCRKRSVVEWEDVLASDIWEVMSEDEHGFXXXXXXXXXXXXXXXKRCFSYC 358
           LA+K I  L+  K S+ +W+ VL SDIW++ +ED                   KRCF+YC
Sbjct: 169 LALKTIGCLLRTKSSISDWKSVLVSDIWDLPNEDNE-IIPALFLSYHHLPSHLKRCFAYC 227

Query: 359 AIFREDAE 382
           A+F +D E
Sbjct: 228 ALFPKDYE 235


>ref|XP_002332101.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222874921|gb|EEF12052.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 963

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/129 (42%), Positives = 74/129 (57%), Gaps = 4/129 (3%)
 Frame = +2

Query: 2   RDENIAEKMAS--TYIHRLGQLSDEECWSFFKHIALREIQDNREK--FEEIGKKIAWKCK 169
           R  N+A +M S  T I  LG LS +ECWS F  +A  E +++RE+   E+IG++IA KCK
Sbjct: 313 RKRNVASRMGSSPTDILELGLLSTDECWSLFSRLAFFE-KNSRERGDLEDIGRQIAAKCK 371

Query: 170 GVPLAVKIIASLMCRKRSVVEWEDVLASDIWEVMSEDEHGFXXXXXXXXXXXXXXXKRCF 349
           G+PLA K + SL+  K  + EWE VL S +WE   E E                  +RCF
Sbjct: 372 GLPLAAKSLGSLLRFKSRIEEWESVLNSHVWESAEEAESKILAPLWLSYYDLPSDMRRCF 431

Query: 350 SYCAIFRED 376
           SYCA+F +D
Sbjct: 432 SYCAVFPKD 440


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