BLASTX nr result
ID: Coptis23_contig00000662
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00000662
(2446 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276953.2| PREDICTED: inactive poly [ADP-ribose] polyme... 513 e-143
ref|XP_002277020.2| PREDICTED: inactive poly [ADP-ribose] polyme... 504 e-140
emb|CAN61759.1| hypothetical protein VITISV_006105 [Vitis vinifera] 501 e-139
ref|XP_002326547.1| predicted protein [Populus trichocarpa] gi|2... 474 e-131
emb|CAN81025.1| hypothetical protein VITISV_023316 [Vitis vinifera] 474 e-131
>ref|XP_002276953.2| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like [Vitis
vinifera]
Length = 599
Score = 513 bits (1321), Expect = e-143
Identities = 292/611 (47%), Positives = 382/611 (62%), Gaps = 9/611 (1%)
Frame = -2
Query: 2175 MEVENAKVLDNGRRIVVDLKRKRAARSMAHFTGXXXXXXXXXXXXALPQMFCKQMGPLMD 1996
ME + KVLD+ RIVV KRKRAA+ AH + CK+
Sbjct: 1 METKLEKVLDSKSRIVVGWKRKRAAQYAAHLSALNSKK----------NRLCKRR----K 46
Query: 1995 FDGCKNSFLPYVKKSLVKNYSNFRKTGLPERVLFYENGDWTDFPEGFIDLVKEDFKMKKV 1816
DG + ++ P +KSL+K YSNF KT LP+R++FY NGDW DFP+ I LV++DF+++K
Sbjct: 47 LDGYRMNYGPNFEKSLLKGYSNFMKTELPQRIMFYVNGDWKDFPQNIITLVRKDFQVRKS 106
Query: 1815 AIEVEFRGCPSLLDFLHMILVDLKTGVQKPIAWIDEAGICFFPEIHSGNNEFHDCFQSGG 1636
EVE G +LDF+HM+ VD+KTG+Q+PIAWIDEAG CF PE SG +E H C +
Sbjct: 107 YTEVELNGNCFMLDFMHMVRVDMKTGLQQPIAWIDEAGNCFIPETFSGEDEIHYCCRHEY 166
Query: 1635 KENHPLLYSDPNESHEIKLQLEIEVTTGDNFKMEDCSEGSNNIVKRLKVEETPGKVCFGL 1456
++ L + +P SH+IKLQLEI++ + K+E+CS SN + K + + P F +
Sbjct: 167 GKDQQLFFGEPYGSHDIKLQLEIDIKGVGHSKLEECSGESNALDKHFLIGKKPASNRFDV 226
Query: 1455 DQEESTDAKSVREIKEVIGENRMSKYLPREKPHSGFLNEKLTTDAVQHMLITGMGSSICA 1276
+ E+S V+ + E +GEN+ + G + L D V+ M +GM S I A
Sbjct: 227 EVEDSNKMSDVK-VDEAVGENQQIE--GNLISRIGSSHGSLDFDTVRDMFTSGMNSLISA 283
Query: 1275 DNIHGIQCSTGYWAQSRLELFEKQVEITEKYRGNANVQYAWLGSSKEAVSRILMHGLGFN 1096
D I + S+ ++RLELF+KQ+EIT KYR +ANV+YAWL +SKEA+S I+M+GLG
Sbjct: 284 DIIEVYRGSSASM-EARLELFQKQIEITSKYRADANVKYAWLAASKEALSSIMMYGLGHC 342
Query: 1095 ELPKTKTSYGSGVHLTSVSCSHVSASYCDVDENGVQHIVLCRVILGNMELVHPGSEQFCP 916
K K YG GVHLT+ + S+ S +YCDVDENGVQHIVLCRVI+GNMELVHPGS Q P
Sbjct: 343 RPSKVKPVYGIGVHLTAANFSYPSVNYCDVDENGVQHIVLCRVIMGNMELVHPGSGQCHP 402
Query: 915 SGENFDSGVDDLLNPEHYTIWNMNMNTHIYPEYVVSFKRASK----GLGSGSESKDGVSA 748
S ENFDSGVDDL NP+HY IWNMNMNTHIYPEYVVSFK +S+ G G+ES +S
Sbjct: 403 SSENFDSGVDDLQNPKHYIIWNMNMNTHIYPEYVVSFKVSSRVGAEGYLIGNESNYDISG 462
Query: 747 V-TISNASQEKLQTNMSPTDSVGDCHQTPLSVDTSQGKNSSIKFAG-KPPKSAWMPFSKL 574
V T SQ + + P D H TP S+ S GK +++ + + PKS WMPF L
Sbjct: 463 VTTCQGQSQGHSKLGLHPVGLGNDSHPTP-SLGRSLGKATTLGSSTLRVPKSPWMPFPML 521
Query: 573 FAAIEDKVPYSSMKLVYQFYGQFRSNKISRDELVHRMRWAIGDTLLRATIISLQAKLPGR 394
FAAI KVP M+LV Y FR KISR + V ++R +GDTLL++TI LQ K+P +
Sbjct: 522 FAAISKKVPLKDMQLVDTQYELFRRKKISRADFVKKLRLIVGDTLLKSTITHLQCKVPSK 581
Query: 393 ---DLVVPKQE 370
DL PKQE
Sbjct: 582 TSCDLEAPKQE 592
>ref|XP_002277020.2| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like [Vitis
vinifera]
Length = 598
Score = 504 bits (1298), Expect = e-140
Identities = 293/618 (47%), Positives = 385/618 (62%), Gaps = 13/618 (2%)
Frame = -2
Query: 2175 MEVENAKVLDNGRRIVVDLKRKRAARSMAHFTGXXXXXXXXXXXXALPQMFCKQMGPLMD 1996
ME + KVLD RR+VV LKRKR A+ A ++ M ++
Sbjct: 1 MEAKFEKVLDTNRRLVVGLKRKRVAQYAASWS----------------PMHKNKLRKQRK 44
Query: 1995 FDGCKNSFLPYVKKSLVKNYSNFRKTGLPERVLFYENGDWTDFPEGFIDLVKEDFKMKKV 1816
DGC+ + K+L+K YSNF KT LP+R++FY NG+WTDFPE + LVK+DF++KK
Sbjct: 45 SDGCRMNSGSNFGKTLLKYYSNFMKTELPQRIMFYLNGEWTDFPEDLVGLVKKDFQVKKS 104
Query: 1815 AIEVEFRGCPSLLDFLHMILVDLKTGVQKPIAWIDEAGICFFPEIHSGNNEFHDCFQSGG 1636
IEVE ++DFLHM VDLKTG++KPIAWIDEAG CFFPEI SG+ E H+C G
Sbjct: 105 YIEVELNNNHFMIDFLHMKRVDLKTGMEKPIAWIDEAGNCFFPEIFSGDAESHNC--CGH 162
Query: 1635 KENHPLLYSDPNESHEIKLQLEIEVTTGDNFKMEDCSEGSNNIVKRLKVEETPGKVCFGL 1456
+ LL+ +P SH+IKLQLEI+V + +++CS SN ++K + +++ P +
Sbjct: 163 ECGQQLLFREPYGSHDIKLQLEIDVNDAGHTNLKECSGESNPVIKHVLIDKNPASDQNDV 222
Query: 1455 DQEESTDAKSVREIKEVIGENRM--SKYLPREKPHSGFLNEKLTTDAVQHMLITGMGSSI 1282
+ E+S + S ++ + +GEN+ K + R + G L D V+ M I+ M I
Sbjct: 223 EVEDSCNKTSDAKMDKAVGENQQMEGKLVTRIESVHGTLK----FDTVRDMFISSMSPFI 278
Query: 1281 CADNIHGIQCSTGYWAQSRLELFEKQVEITEKYRGNANVQYAWLGSSKEAVSRILMHGLG 1102
A + Q S+ Q+RLELF+KQVEIT KYR ANV+YAWL SSKEA+S I+M+GLG
Sbjct: 279 SASILEVYQGSSSSM-QARLELFQKQVEITSKYRTEANVRYAWLASSKEALSSIMMYGLG 337
Query: 1101 FNELPKTKTSYGSGVHLTSVSCSHVSASYCDVDENGVQHIVLCRVILGNMELVHPGSEQF 922
+ K +YG GVHLT+V+ ++SA+YCDVDENGVQH+VLCRVILGNMELVH GS+Q
Sbjct: 338 HYGTSQEKLTYGIGVHLTAVNFPYISANYCDVDENGVQHVVLCRVILGNMELVHLGSKQC 397
Query: 921 CPSGENFDSGVDDLLNPEHYTIWNMNMNTHIYPEYVVSFKRASKGLGSG----SESKDGV 754
PS E+FDSGVDDL NP HY +WNMNMNTHIYPE+VVSFK +S G + KD V
Sbjct: 398 YPSCEDFDSGVDDLQNPRHYIVWNMNMNTHIYPEFVVSFKVSSSSSAEGYLVENGRKDDV 457
Query: 753 SAVTISNASQEKLQTNMSPTDSVG---DCHQTPLSVDTSQGKNSSI-KFAGKPPKSAWMP 586
S + E Q ++ VG C QTP ++ S GK ++ K PKS WMP
Sbjct: 458 SGFSPPQRQPEG-QLQLASHHPVGLGPHCPQTP-GLEGSLGKAATFGSSTVKVPKSPWMP 515
Query: 585 FSKLFAAIEDKVPYSSMKLVYQFYGQFRSNKISRDELVHRMRWAIGDTLLRATIISLQAK 406
F LFAAI KVP M+LV Y QFR+ KI+R + V ++R +GDTLLR+TI LQ K
Sbjct: 516 FPMLFAAISKKVPLKDMQLVNAQYEQFRTKKINRADFVKKLRMIVGDTLLRSTITHLQCK 575
Query: 405 LPGR---DLVVPKQEQGT 361
+P + D VPKQE T
Sbjct: 576 VPSKSQGDAKVPKQEPET 593
>emb|CAN61759.1| hypothetical protein VITISV_006105 [Vitis vinifera]
Length = 604
Score = 501 bits (1291), Expect = e-139
Identities = 284/597 (47%), Positives = 373/597 (62%), Gaps = 6/597 (1%)
Frame = -2
Query: 2175 MEVENAKVLDNGRRIVVDLKRKRAARSMAHFTGXXXXXXXXXXXXALPQMFCKQMGPLMD 1996
ME + KVLD+ RIVV KRKRAA+ AH + CK+
Sbjct: 1 METKLEKVLDSKSRIVVGWKRKRAAQYAAHLSALNSKK----------NRLCKRR----K 46
Query: 1995 FDGCKNSFLPYVKKSLVKNYSNFRKTGLPERVLFYENGDWTDFPEGFIDLVKEDFKMKKV 1816
DG + ++ P +KSL+K YSNF KT LP+ ++FY NGDW DFP+ I LV++DF+++K
Sbjct: 47 LDGYRMNYGPNFEKSLLKGYSNFMKTELPQXIMFYVNGDWXDFPQNIITLVRKDFQVRKS 106
Query: 1815 AIEVEFRGCPSLLDFLHMILVDLKTGVQKPIAWIDEAGICFFPEIHSGNNEFHDCFQSGG 1636
EVE G +LDF+HM+ VD+KTG+Q+PIAWIDEAG CF PE SG +E H C +
Sbjct: 107 YTEVELNGNCFMLDFMHMVRVDMKTGLQQPIAWIDEAGNCFXPETFSGEDEIHYCCRHEY 166
Query: 1635 KENHPLLYSDPNESHEIKLQLEIEVTTGDNFKMEDCSEGSNNIVKRLKVEETPGKVCFGL 1456
++ L + +P SH+IKLQLEI++ + K+E+CS SN + K + + P F +
Sbjct: 167 GKDQQLFFGEPYGSHDIKLQLEIDIKGVGHSKLEECSGESNALDKHFLIGKKPASNRFDV 226
Query: 1455 DQEESTDAKSVREIKEVIGENRMSKYLPREKPHSGFLNEKLTTDAVQHMLITGMGSSICA 1276
+ E+S V+ + E +GEN+ + G + L D V+ M +GM S I A
Sbjct: 227 EVEDSNKMSDVK-VDEAVGENQQIE--GNLISRIGSSHGSLDFDTVRDMFTSGMNSLISA 283
Query: 1275 DNIHGIQCSTGYWAQSRLELFEKQVEITEKYRGNANVQYAWLGSSKEAVSRILMHGLGFN 1096
D I + S+ ++RLELF+KQ+EIT KYR +ANV+YAWL +SKEA+S I+M+GLG
Sbjct: 284 DIIEVYRGSSASM-EARLELFQKQIEITSKYRADANVKYAWLAASKEALSSIMMYGLGHC 342
Query: 1095 ELPKTKTSYGSGVHLTSVSCSHVSASYCDVDENGVQHIVLCRVILGNMELVHPGSEQFCP 916
K K YG GVHLT+ + S+ S +YCDVDENGVQHIVLCRVI+GNMELVHPGS Q P
Sbjct: 343 RPSKVKPVYGIGVHLTAANFSYPSVNYCDVDENGVQHIVLCRVIMGNMELVHPGSGQCHP 402
Query: 915 SGENFDSGVDDLLNPEHYTIWNMNMNTHIYPEYVVSFKRASK----GLGSGSESKDGVSA 748
S ENFDSGVDDL NP+HY IWNMNMNTHIYPEYVVSFK +S+ G G+ES +S
Sbjct: 403 SSENFDSGVDDLQNPKHYIIWNMNMNTHIYPEYVVSFKVSSRVGAEGYLIGNESNYDISG 462
Query: 747 V-TISNASQEKLQTNMSPTDSVGDCHQTPLSVDTSQGKNSSIKFAG-KPPKSAWMPFSKL 574
V T SQ + + P D H TP S+ S GK +++ + + PKS WMPF L
Sbjct: 463 VTTCQGQSQGHSKLGLHPVGLXNDSHPTP-SLGRSLGKATTLGSSTLRVPKSPWMPFPML 521
Query: 573 FAAIEDKVPYSSMKLVYQFYGQFRSNKISRDELVHRMRWAIGDTLLRATIISLQAKL 403
FAAI KVP M+LV Y FR KISR + V ++R +GDTLL++TI LQ K+
Sbjct: 522 FAAISKKVPLKDMQLVDTQYELFRRKKISRADFVKKLRLIVGDTLLKSTITHLQCKV 578
>ref|XP_002326547.1| predicted protein [Populus trichocarpa] gi|222833869|gb|EEE72346.1|
predicted protein [Populus trichocarpa]
Length = 623
Score = 474 bits (1220), Expect = e-131
Identities = 269/619 (43%), Positives = 376/619 (60%), Gaps = 27/619 (4%)
Frame = -2
Query: 2175 MEVENAKVLDNGRRIVVDLKRKRAARSMAHFTGXXXXXXXXXXXXALPQMFCKQMGPLMD 1996
ME AKVLD+ RR+++ +KRKRA+R+ A+F+G L + G
Sbjct: 1 MEARIAKVLDSSRRVMLGVKRKRASRNAAYFSGASHTVLPEW----LTLNSIHKPGKRKK 56
Query: 1995 FDGCKNSFLPYV-----KKSLVKNYSNFRKTGLPERVLFYENGDWTDFPEGFIDLVKEDF 1831
DG ++ P+ ++SL++ YSNF +TG+P+R++ Y+N +WTDFP+ + LV++D
Sbjct: 57 LDGSQSK--PWSCGHPSRRSLLRCYSNFTRTGVPQRLMCYQNEEWTDFPKDLVTLVRKDL 114
Query: 1830 KMKKVAIEVEFRGCPSLLDFLHMILVDLKTGVQKPIAWIDEAGICFFPEIHSGNNEFHDC 1651
+ KK +EVE G ++DFLHM+ +D+KTG+Q+PIAWIDEAG CFFPEI++ +E H C
Sbjct: 115 QGKKAVVEVELEGRRYVIDFLHMLRMDMKTGIQQPIAWIDEAGGCFFPEIYADEDEPHLC 174
Query: 1650 FQSGGKENHPLLYSDPNESHEIKLQLEIEVTTGDNFKMEDCSEGSNNIVKRLKVEETPGK 1471
Q ++ ++ +P SHEIKLQLEI++ GD K+E CS SN +VK +++ + P
Sbjct: 175 CQHDCAKDQGSIFREPPGSHEIKLQLEIDINGGDQSKLE-CSGESNGLVKHIQIAQKPTS 233
Query: 1470 VCFGLDQEESTDAKSVREIKEVIGENRMSKYLPREKPHSGFLNEKLTTDAVQHMLITGMG 1291
++ +S + K+ +I E EN+ K S + L +D V+ + +T M
Sbjct: 234 DHHLVEVGDSYNRKTGEKIVESNEENQQIKANLVTGTES--FTQMLDSDTVKKIFVTSMN 291
Query: 1290 SSICADNIHGIQCSTGYWAQSRLELFEKQVEITEKYRGNANVQYAWLGSSKEAVSRILMH 1111
AD + +CS+ R ELF+KQ+E+TEKYRG+ANV+YAWL SSK A+S I+++
Sbjct: 292 PFGGADIVDISRCSSTLMPV-RFELFQKQIELTEKYRGDANVRYAWLASSKGALSTIMLY 350
Query: 1110 GLGFNELPKTKTSYGSGVHLTSVSCSHVSASYCDVDENGVQHIVLCRVILGNMELVHPGS 931
GLG TK+ +G GVHL++ + H SA+YCDVDENGV+H+V CRVI+GNMEL+ GS
Sbjct: 351 GLGHCVPCTTKSEHGIGVHLSAANFCHTSANYCDVDENGVRHLVFCRVIMGNMELLQHGS 410
Query: 930 EQFCPSGENFDSGVDDLLNPEHYTIWNMNMNTHIYPEYVVSFKRA--SKGLGSGSESKDG 757
QF PS E+FDSGVDDL NP Y +WNMNMNTHIYPE+VVSFK S+G GSESK
Sbjct: 411 RQFHPSSEDFDSGVDDLENPREYIVWNMNMNTHIYPEFVVSFKFTPNSEGFLVGSESKHS 470
Query: 756 VSAVTISN-------------------ASQEKLQTNMSPTDSVGDCHQTPLSVDTSQGKN 634
VS VT S+ + N SP +G Q S GK+
Sbjct: 471 VSGVTTSSNGGQGCLPVESPAVDLNVPVESSAVDLNKSPAADMGSEIQPVSGSGRSLGKS 530
Query: 633 SSIKFAG-KPPKSAWMPFSKLFAAIEDKVPYSSMKLVYQFYGQFRSNKISRDELVHRMRW 457
S+ + + PKS WMPF LFA I +KVP M+L+ Y FR KISR+ V ++R
Sbjct: 531 PSLSSSNTRTPKSPWMPFPMLFAVISNKVPSKDMELITNHYELFREKKISRENFVKKLRL 590
Query: 456 AIGDTLLRATIISLQAKLP 400
+GD LL++TI SLQ KLP
Sbjct: 591 IVGDALLKSTITSLQGKLP 609
>emb|CAN81025.1| hypothetical protein VITISV_023316 [Vitis vinifera]
Length = 857
Score = 474 bits (1219), Expect = e-131
Identities = 284/641 (44%), Positives = 370/641 (57%), Gaps = 51/641 (7%)
Frame = -2
Query: 2175 MEVENAKVLDNGRRIVVDLKRKRAARSMAHFTGXXXXXXXXXXXXALPQMFCKQMGPLMD 1996
ME + KVLD RR+VV LKRKR A+ A ++ M ++
Sbjct: 1 MEAKFEKVLDTNRRLVVGLKRKRVAQYAASWS----------------PMHKNKLRKQRK 44
Query: 1995 FDGCKNSFLPYVKKSLVKNYSNFRKTGLPERVLFYENGDWTDFPEGFIDLVKEDFKMKKV 1816
DGC+ + K+L+K YSNF KT LP+R++FY NG+WTDFPE + LVK+DF++KK
Sbjct: 45 SDGCRMNSGSNFGKTLLKYYSNFMKTELPQRIMFYLNGEWTDFPEDLVGLVKKDFQVKKS 104
Query: 1815 AIEVEFRGCPSLLDFLHMILVDLKTGVQKPIAWIDEAGICFFPEIHSGNNEFHDCFQSGG 1636
IEVE ++DFLHM VDLKTG++KPIAWIDEAG CFFPEI SG+ E H+C G
Sbjct: 105 YIEVELNNNHFMIDFLHMKRVDLKTGMEKPIAWIDEAGNCFFPEIFSGDAESHNC--CGH 162
Query: 1635 KENHPLLYSDPNESHEIKLQLEIEVTTGDNFKMEDCSEGSNNIVKRLKVEETPGKVCFGL 1456
+ LL+ +P SH+IKLQLEI+V + +++CS SN ++K + +++ P +
Sbjct: 163 ECGQQLLFREPYXSHDIKLQLEIDVNDXGHTNLKECSGESNPVIKHVLIDKNPASDQNDV 222
Query: 1455 DQEESTDAKSVREIKEVIGENRM--SKYLPREKPHSGFLNEKLTTDAVQHMLITGMGSSI 1282
+ E+S + S ++ + GEN+ K + R + G L D V+ M I+ M I
Sbjct: 223 EVEDSCNKTSDAKMDKAXGENQQMEGKLVTRIESVHGTLK----FDTVRDMFISSMSPFI 278
Query: 1281 CADNIHGIQCSTGYWAQSRLELFEKQVEITEKYRGNANVQYAWLGSSKEAVSRILMHGLG 1102
A + Q S+ Q+RLELF+KQVEIT KYR ANV+YAWL SSKEA+S I+M+GLG
Sbjct: 279 SASILEVYQGSSSSM-QARLELFQKQVEITSKYRTEANVRYAWLASSKEALSSIMMYGLG 337
Query: 1101 FNELPKTKTSYGSGVHLTSVSCSHVSASYCDVDENGVQHIVLCRVILGNMELVHPGSEQF 922
+ K +YG GVHLT+V+ ++SA+YCDVDENGVQH+VLCRVILGNMELVH GS+Q
Sbjct: 338 HYGTSQEKLTYGIGVHLTAVNFPYISANYCDVDENGVQHVVLCRVILGNMELVHLGSKQC 397
Query: 921 CPSGENFDSGVDDLLNPEHYTIWNMNMNTHIYPEYVVSFKRASKGLGSG----SESKDGV 754
PS E+FDSGVDDL NP HY +WNMNMNTHIYPE+VVSFK +S G + KD V
Sbjct: 398 YPSCEDFDSGVDDLQNPRHYIVWNMNMNTHIYPEFVVSFKVSSSSSAEGYLVENGRKDDV 457
Query: 753 SAV-------------------------TISNASQEKLQTNMS----------------- 700
S T S E S
Sbjct: 458 SGFSPPQRQPEGQLQLASHHPVGLVVTGTGKEVSNEGYHIKRSLEGSGLNEVLRFETWIF 517
Query: 699 --PTDSVGDCHQTPLSVDTSQGKNSSI-KFAGKPPKSAWMPFSKLFAAIEDKVPYSSMKL 529
P G P ++ S GK ++ K PKS WMPF LFAAI KVP M+L
Sbjct: 518 GFPNGKKGIEAAVPEGLEGSLGKAATFGSSTVKVPKSPWMPFPMLFAAISKKVPLKDMQL 577
Query: 528 VYQFYGQFRSNKISRDELVHRMRWAIGDTLLRATIISLQAK 406
V Y QFR+ KI+R + V ++R +GDTLLR+TI LQ K
Sbjct: 578 VNAQYEQFRTKKINRADFVKKLRMIVGDTLLRSTITHLQCK 618