BLASTX nr result

ID: Coptis23_contig00000644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000644
         (1722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528028.1| elongation factor 1-alpha, putative [Ricinus...   581   e-163
ref|XP_002528020.1| elongation factor 1-alpha, putative [Ricinus...   581   e-163
ref|XP_002518073.1| elongation factor 1-alpha, putative [Ricinus...   581   e-163
ref|XP_003524589.1| PREDICTED: elongation factor 1-alpha-like is...   579   e-163
ref|XP_003553292.1| PREDICTED: elongation factor 1-alpha-like is...   578   e-162

>ref|XP_002528028.1| elongation factor 1-alpha, putative [Ricinus communis]
            gi|223532558|gb|EEF34346.1| elongation factor 1-alpha,
            putative [Ricinus communis]
          Length = 449

 Score =  581 bits (1498), Expect = e-163
 Identities = 283/295 (95%), Positives = 292/295 (98%)
 Frame = -3

Query: 1285 QTGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYEEIVKEVSSYLKKVGY 1106
            + GISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARY+EIVKEVSSYLKKVGY
Sbjct: 124  EAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 183

Query: 1105 NPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQISEPKRPTDKPLRLPLQDVYK 926
            NPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLL+ALDQI+EPKRPTDKPLRLPLQDVYK
Sbjct: 184  NPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYK 243

Query: 925  IGGIGTVPVGRVETGVIKPGIVVTFGPSGLTTEVKSVEMHHEALLEALPGDNVGFNVKNV 746
            IGGIGTVPVGRVETGV+KPG+VVTFGPSGLTTEVKSVEMHHEAL EALPGDNVGFNVKNV
Sbjct: 244  IGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNV 303

Query: 745  AVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEI 566
            AVKDLKRG+VASNSKDDPAKEAANFT+QVIIMNHPGQIGNGYAPVLDCHTSHIAVKF+EI
Sbjct: 304  AVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEI 363

Query: 565  LTKIDRRSGKELEKEPKFLKNGDAAFVKMIPTKPMVVETFSEYPPLGRFAVRDMR 401
            LTKIDRRSGKELEKEPKFLKNGDA FVKMIPTKPMVVETFSEYPPLGRFAVRDMR
Sbjct: 364  LTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMR 418


>ref|XP_002528020.1| elongation factor 1-alpha, putative [Ricinus communis]
            gi|223532550|gb|EEF34338.1| elongation factor 1-alpha,
            putative [Ricinus communis]
          Length = 348

 Score =  581 bits (1498), Expect = e-163
 Identities = 283/295 (95%), Positives = 292/295 (98%)
 Frame = -3

Query: 1285 QTGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYEEIVKEVSSYLKKVGY 1106
            + GISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARY+EIVKEVSSYLKKVGY
Sbjct: 23   EAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 82

Query: 1105 NPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQISEPKRPTDKPLRLPLQDVYK 926
            NPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLL+ALDQI+EPKRPTDKPLRLPLQDVYK
Sbjct: 83   NPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYK 142

Query: 925  IGGIGTVPVGRVETGVIKPGIVVTFGPSGLTTEVKSVEMHHEALLEALPGDNVGFNVKNV 746
            IGGIGTVPVGRVETGV+KPG+VVTFGPSGLTTEVKSVEMHHEAL EALPGDNVGFNVKNV
Sbjct: 143  IGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNV 202

Query: 745  AVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEI 566
            AVKDLKRG+VASNSKDDPAKEAANFT+QVIIMNHPGQIGNGYAPVLDCHTSHIAVKF+EI
Sbjct: 203  AVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEI 262

Query: 565  LTKIDRRSGKELEKEPKFLKNGDAAFVKMIPTKPMVVETFSEYPPLGRFAVRDMR 401
            LTKIDRRSGKELEKEPKFLKNGDA FVKMIPTKPMVVETFSEYPPLGRFAVRDMR
Sbjct: 263  LTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMR 317


>ref|XP_002518073.1| elongation factor 1-alpha, putative [Ricinus communis]
            gi|255554068|ref|XP_002518074.1| elongation factor
            1-alpha, putative [Ricinus communis]
            gi|223542669|gb|EEF44206.1| elongation factor 1-alpha,
            putative [Ricinus communis] gi|223542670|gb|EEF44207.1|
            elongation factor 1-alpha, putative [Ricinus communis]
          Length = 449

 Score =  581 bits (1497), Expect = e-163
 Identities = 282/295 (95%), Positives = 292/295 (98%)
 Frame = -3

Query: 1285 QTGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYEEIVKEVSSYLKKVGY 1106
            + GISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARY+EIVKEVSSYLKKVGY
Sbjct: 124  EAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 183

Query: 1105 NPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQISEPKRPTDKPLRLPLQDVYK 926
            NPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLL+ALDQI+EPKRP+DKPLRLPLQDVYK
Sbjct: 184  NPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYK 243

Query: 925  IGGIGTVPVGRVETGVIKPGIVVTFGPSGLTTEVKSVEMHHEALLEALPGDNVGFNVKNV 746
            IGGIGTVPVGRVETGV+KPG+VVTFGPSGLTTE+KSVEMHHEAL EALPGDNVGFNVKNV
Sbjct: 244  IGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEIKSVEMHHEALQEALPGDNVGFNVKNV 303

Query: 745  AVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEI 566
            AVKDLKRGYVASNSKDDPAKEAANFT+QVIIMNHPGQIGNGYAPVLDCHTSHIAVKF+EI
Sbjct: 304  AVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEI 363

Query: 565  LTKIDRRSGKELEKEPKFLKNGDAAFVKMIPTKPMVVETFSEYPPLGRFAVRDMR 401
            LTKIDRRSGKELEKEPKFLKNGDA FVKMIPTKPMVVETFSEYPPLGRFAVRDMR
Sbjct: 364  LTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMR 418


>ref|XP_003524589.1| PREDICTED: elongation factor 1-alpha-like isoform 1 [Glycine max]
            gi|356511758|ref|XP_003524590.1| PREDICTED: elongation
            factor 1-alpha-like isoform 2 [Glycine max]
          Length = 447

 Score =  579 bits (1493), Expect = e-163
 Identities = 281/295 (95%), Positives = 291/295 (98%)
 Frame = -3

Query: 1285 QTGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYEEIVKEVSSYLKKVGY 1106
            + GISKDGQTREHALL+FTLGVKQMICCCNKMDATTPKYSKARY+EIVKEVSSYLKKVGY
Sbjct: 124  EAGISKDGQTREHALLSFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 183

Query: 1105 NPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQISEPKRPTDKPLRLPLQDVYK 926
            NPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQISEPKRP+DKPLRLPLQDVYK
Sbjct: 184  NPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQISEPKRPSDKPLRLPLQDVYK 243

Query: 925  IGGIGTVPVGRVETGVIKPGIVVTFGPSGLTTEVKSVEMHHEALLEALPGDNVGFNVKNV 746
            IGGIGTVPVGRVETGV+KPG+VVTF P+GLTTEVKSVEMHHEAL EALPGDNVGFNVKNV
Sbjct: 244  IGGIGTVPVGRVETGVLKPGMVVTFAPTGLTTEVKSVEMHHEALTEALPGDNVGFNVKNV 303

Query: 745  AVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEI 566
            AVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF+E+
Sbjct: 304  AVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEL 363

Query: 565  LTKIDRRSGKELEKEPKFLKNGDAAFVKMIPTKPMVVETFSEYPPLGRFAVRDMR 401
            +TKIDRRSGKELEKEPKFLKNGDA FVKMIPTKPMVVETFSEYPPLGRFAVRDMR
Sbjct: 364  MTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMR 418


>ref|XP_003553292.1| PREDICTED: elongation factor 1-alpha-like isoform 1 [Glycine max]
            gi|356570231|ref|XP_003553293.1| PREDICTED: elongation
            factor 1-alpha-like isoform 2 [Glycine max]
          Length = 447

 Score =  578 bits (1490), Expect = e-162
 Identities = 281/295 (95%), Positives = 291/295 (98%)
 Frame = -3

Query: 1285 QTGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYEEIVKEVSSYLKKVGY 1106
            + GISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARY+EIVKEVSSYLKKVGY
Sbjct: 124  EAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 183

Query: 1105 NPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQISEPKRPTDKPLRLPLQDVYK 926
            NPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLL+ALDQI+EPKRP+DKPLRLPLQDVYK
Sbjct: 184  NPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYK 243

Query: 925  IGGIGTVPVGRVETGVIKPGIVVTFGPSGLTTEVKSVEMHHEALLEALPGDNVGFNVKNV 746
            IGGIGTVPVGRVETGV+KPG+VVTFGP+GLTTEVKSVEMHHEAL EALPGDNVGFNVKNV
Sbjct: 244  IGGIGTVPVGRVETGVVKPGMVVTFGPTGLTTEVKSVEMHHEALTEALPGDNVGFNVKNV 303

Query: 745  AVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEI 566
            AVKDLKRG+VASNSKDDPAKEAANFT+QVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEI
Sbjct: 304  AVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEI 363

Query: 565  LTKIDRRSGKELEKEPKFLKNGDAAFVKMIPTKPMVVETFSEYPPLGRFAVRDMR 401
            LTKIDRRSGKELEKEPKFLKNGDA  VKMIPTKPMVVETFSEYPPLGRFAVRDMR
Sbjct: 364  LTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMR 418


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