BLASTX nr result

ID: Coptis23_contig00000614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000614
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19186.3| unnamed protein product [Vitis vinifera]              201   8e-50
ref|XP_002285759.1| PREDICTED: uncharacterized protein LOC100242...   199   3e-49
ref|XP_002298705.1| predicted protein [Populus trichocarpa] gi|2...   194   8e-48
dbj|BAJ33879.1| unnamed protein product [Thellungiella halophila]     193   2e-47
ref|XP_002323973.1| predicted protein [Populus trichocarpa] gi|2...   193   2e-47

>emb|CBI19186.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score =  201 bits (511), Expect = 8e-50
 Identities = 100/170 (58%), Positives = 128/170 (75%), Gaps = 5/170 (2%)
 Frame = -1

Query: 497 HNSALTMSSIYYYAIF-----LLFFINPSLATTRKLQALVKEQPLILQYHNGVLLKGNFS 333
           H    +M+S Y+++IF     L F +NP+ AT RKL +LV+EQPLIL+YHNG LLKGN +
Sbjct: 56  HYFTFSMTSTYHFSIFVSLLLLSFLLNPTSATPRKLFSLVQEQPLILKYHNGPLLKGNIT 115

Query: 332 VNLIWYGKFTPIQRSILIDFIQSLNSSPRGTLQPSVSSWWKITEKYKAGTSNLVLGKQIL 153
           +NL+WYG F+PIQRSIL+DF+QSLNS    T   SVSSWW+  +KYK  +  L +G QIL
Sbjct: 116 LNLVWYGNFSPIQRSILVDFLQSLNS--HTTTPHSVSSWWQTIQKYKGVSCTLAVGNQIL 173

Query: 152 DESYSLGKSLKTPQIISLASKTGERNSINVVLTAQDVLVDGFCMSRCGTH 3
           DE YSLGKSL++  IISLAS++ +R+ I VV T+ DV V+GFCMSRCGTH
Sbjct: 174 DEDYSLGKSLRSSDIISLASRSNQRSEITVVFTSADVAVEGFCMSRCGTH 223


>ref|XP_002285759.1| PREDICTED: uncharacterized protein LOC100242154 isoform 1 [Vitis
           vinifera]
          Length = 301

 Score =  199 bits (506), Expect = 3e-49
 Identities = 99/164 (60%), Positives = 126/164 (76%), Gaps = 5/164 (3%)
 Frame = -1

Query: 479 MSSIYYYAIF-----LLFFINPSLATTRKLQALVKEQPLILQYHNGVLLKGNFSVNLIWY 315
           M+S Y+++IF     L F +NP+ AT RKL +LV+EQPLIL+YHNG LLKGN ++NL+WY
Sbjct: 1   MTSTYHFSIFVSLLLLSFLLNPTSATPRKLFSLVQEQPLILKYHNGPLLKGNITLNLVWY 60

Query: 314 GKFTPIQRSILIDFIQSLNSSPRGTLQPSVSSWWKITEKYKAGTSNLVLGKQILDESYSL 135
           G F+PIQRSIL+DF+QSLNS    T   SVSSWW+  +KYK  +  L +G QILDE YSL
Sbjct: 61  GNFSPIQRSILVDFLQSLNS--HTTTPHSVSSWWQTIQKYKGVSCTLAVGNQILDEDYSL 118

Query: 134 GKSLKTPQIISLASKTGERNSINVVLTAQDVLVDGFCMSRCGTH 3
           GKSL++  IISLAS++ +R+ I VV T+ DV V+GFCMSRCGTH
Sbjct: 119 GKSLRSSDIISLASRSNQRSEITVVFTSADVAVEGFCMSRCGTH 162


>ref|XP_002298705.1| predicted protein [Populus trichocarpa] gi|222845963|gb|EEE83510.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score =  194 bits (494), Expect = 8e-48
 Identities = 103/162 (63%), Positives = 125/162 (77%), Gaps = 3/162 (1%)
 Frame = -1

Query: 479 MSSIYYYAI--FLLFFINPSLATTRKLQALVKEQPLILQYHNGVLLKGNFSVNLIWYGKF 306
           M+S YY A   FL  FI+PSL+      ALV+EQPL+L+YHNG+LLKGN +VNLIWYG+F
Sbjct: 1   MASNYYLATLAFLFCFISPSLS------ALVQEQPLVLKYHNGILLKGNITVNLIWYGEF 54

Query: 305 TPIQRSILIDFIQSLNSSPRGTLQPSVSSWWKITEKYKAGTSNLVLGKQILDESYSLGKS 126
           TPIQRSI++DFI SLNS  +G   PS SSWWK TE Y+ G+S+L +G QIL E  +LGK 
Sbjct: 55  TPIQRSIIVDFINSLNS--KGAPLPSTSSWWKTTEMYRGGSSSLTVGHQILHEELTLGKI 112

Query: 125 LKTPQIISLASKTG-ERNSINVVLTAQDVLVDGFCMSRCGTH 3
           LK+  +I+LASKT    NSINVVLTA+DV VDGFCM+RCGTH
Sbjct: 113 LKSQHLIALASKTHFTVNSINVVLTAKDVAVDGFCMNRCGTH 154


>dbj|BAJ33879.1| unnamed protein product [Thellungiella halophila]
          Length = 304

 Score =  193 bits (491), Expect = 2e-47
 Identities = 102/162 (62%), Positives = 123/162 (75%), Gaps = 3/162 (1%)
 Frame = -1

Query: 479 MSSIYYYAIFL-LFFINPSLATTRKLQALVKEQPLILQYHNGVLLKGNFSVNLIWYGKFT 303
           M+  Y +AIFL L F     +T     ALVKEQPLIL+YHNGVLLKGN +VNL+WYGKFT
Sbjct: 1   MACNYRFAIFLTLLFATAGPSTA----ALVKEQPLILKYHNGVLLKGNITVNLVWYGKFT 56

Query: 302 PIQRSILIDFIQSLNSSPRGT-LQPSVSSWWKITEKYKAGTSNLVLGKQILDESYSLGKS 126
           PIQRS+++DFI+SLNS    T   PSV+SWWK TEKYK G+S LV+GKQ+L E Y LGKS
Sbjct: 57  PIQRSVIVDFIRSLNSKDAATSAVPSVASWWKTTEKYKGGSSTLVVGKQLLLEKYPLGKS 116

Query: 125 LKTPQIISLASK-TGERNSINVVLTAQDVLVDGFCMSRCGTH 3
           LK P + +L++K  G   SI VVLTA+DV V+GFCM+RCGTH
Sbjct: 117 LKNPYLRALSTKLNGGLRSITVVLTAKDVTVEGFCMNRCGTH 158


>ref|XP_002323973.1| predicted protein [Populus trichocarpa] gi|222866975|gb|EEF04106.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score =  193 bits (491), Expect = 2e-47
 Identities = 99/151 (65%), Positives = 121/151 (80%), Gaps = 1/151 (0%)
 Frame = -1

Query: 452 FLLFFINPSLATTRKLQALVKEQPLILQYHNGVLLKGNFSVNLIWYGKFTPIQRSILIDF 273
           FLL F+ PS A      ALV+EQPL+L+YHNG+LLKGN +VNLIWYG+FTPIQRSI++DF
Sbjct: 3   FLLCFLAPSFA------ALVQEQPLVLKYHNGILLKGNITVNLIWYGQFTPIQRSIIVDF 56

Query: 272 IQSLNSSPRGTLQPSVSSWWKITEKYKAGTSNLVLGKQILDESYSLGKSLKTPQIISLAS 93
           I SLNS  +G   PS SSWWK TEKY+ G+S+L +G QIL E Y+LGK LK+  +I+LAS
Sbjct: 57  INSLNS--KGAPLPSTSSWWKTTEKYRGGSSSLSVGHQILHEEYTLGKILKSQHLIALAS 114

Query: 92  KTG-ERNSINVVLTAQDVLVDGFCMSRCGTH 3
           KT    +SINVVLTA+DV+VDGFCMS+CGTH
Sbjct: 115 KTHFAVSSINVVLTAKDVVVDGFCMSKCGTH 145


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