BLASTX nr result

ID: Coptis23_contig00000584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000584
         (1636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264734.1| PREDICTED: uncharacterized protein LOC100261...   418   e-114
emb|CAN66525.1| hypothetical protein VITISV_043977 [Vitis vinifera]   414   e-113
ref|XP_002533060.1| dopamine beta-monooxygenase, putative [Ricin...   392   e-106
ref|XP_002301814.1| predicted protein [Populus trichocarpa] gi|2...   388   e-105
gb|ABK94382.1| unknown [Populus trichocarpa]                          388   e-105

>ref|XP_002264734.1| PREDICTED: uncharacterized protein LOC100261667 [Vitis vinifera]
            gi|296089602|emb|CBI39421.3| unnamed protein product
            [Vitis vinifera]
          Length = 397

 Score =  418 bits (1074), Expect = e-114
 Identities = 209/354 (59%), Positives = 254/354 (71%)
 Frame = -1

Query: 1402 KNRLFEHCNDLPKLSSYLHYTYNPSKSTLNLAFIASPAKTNGWIAWAINPLAPKMIGSQA 1223
            KNRL+ HCNDLP LSSYLH+TYN +KS+L+LAFIA PA ++GWIAWAINP    M+GSQA
Sbjct: 37   KNRLYTHCNDLPHLSSYLHWTYNSNKSSLSLAFIAPPASSSGWIAWAINPNQTGMVGSQA 96

Query: 1222 LIAYKQDNGLMTVKAFNVTSYKGVGEPSKIAFDVPEMEAEVVNGVMRIYAVIVLPKSMGT 1043
            LIA+K+D+G MTVK +N+ SYK + + ++IA+DV +MEAE  +G MRI+A + LP++   
Sbjct: 97   LIAFKEDSGSMTVKTYNLVSYKLINQ-TEIAYDVSDMEAEYESGEMRIFATLALPENTQE 155

Query: 1042 VLNHVWQVGSSVTNGIPDVHGFKDDNLKSVATLDLTKXXXXXXXXXXXGVVNSRLRKKNI 863
             LN VWQVGS V +G P +HGF+ DNL S   LDL K              NSRLR KNI
Sbjct: 156  -LNQVWQVGSRVVDGKPSIHGFQPDNLNSKGKLDLIKGQSDTSSGG-----NSRLRNKNI 209

Query: 862  HGVLNVVSWGIMFPLGVIIARYLRTFQSADPAWFYLHVFCQFSAYVIGVTGWSTGLKLGS 683
            HGVLN VSWGIM P+G++IARYLRTF+   PAWFYLHV CQ SAY IGV GW+TGLKLG 
Sbjct: 210  HGVLNAVSWGIMLPIGMMIARYLRTFRLFHPAWFYLHVSCQVSAYAIGVAGWATGLKLGG 269

Query: 682  QSKGIRYTYHRNIGIALFSFATLQIFALFLRPKKEHKYRTFWNXXXXXXXXXXXXXXXIN 503
            QSKG++YT HR IGI LFS ATLQ+FALFLRPKK+HKYR +WN                N
Sbjct: 270  QSKGVQYTTHRYIGITLFSLATLQVFALFLRPKKDHKYRFYWNIYHHGIGYAIVVLGIFN 329

Query: 502  VFQGLDILDPEKKWRAAYXXXXXXXXXXXXXLEAITWIIVLKRKSKKSTKPYDG 341
            VF+GL+ILDP+KKW++AY             LE ITWI+V+KRKS +  K YDG
Sbjct: 330  VFKGLEILDPQKKWKSAYIILLIILGGIALFLEVITWIVVVKRKSSEPKKAYDG 383


>emb|CAN66525.1| hypothetical protein VITISV_043977 [Vitis vinifera]
          Length = 397

 Score =  414 bits (1065), Expect = e-113
 Identities = 207/354 (58%), Positives = 252/354 (71%)
 Frame = -1

Query: 1402 KNRLFEHCNDLPKLSSYLHYTYNPSKSTLNLAFIASPAKTNGWIAWAINPLAPKMIGSQA 1223
            KNRL+ HCNDLP LSSYLH+TYN +KS+L+LAFIA PA ++GWIAWAINP    M+GSQA
Sbjct: 37   KNRLYSHCNDLPHLSSYLHWTYNSNKSSLSLAFIAPPASSSGWIAWAINPNQTGMVGSQA 96

Query: 1222 LIAYKQDNGLMTVKAFNVTSYKGVGEPSKIAFDVPEMEAEVVNGVMRIYAVIVLPKSMGT 1043
            LIA+K+ +G MTVK +N+ SYK + + ++IA+DV +MEAE  +G MRI+A + LP++   
Sbjct: 97   LIAFKEXSGSMTVKTYNLVSYKLINQ-TEIAYDVSDMEAEYESGEMRIFATLALPENT-Q 154

Query: 1042 VLNHVWQVGSSVTNGIPDVHGFKDDNLKSVATLDLTKXXXXXXXXXXXGVVNSRLRKKNI 863
             LN VWQVGS V +G P +HGF+ DNL S   LDL K              NSRLR KNI
Sbjct: 155  ALNQVWQVGSRVVDGKPSIHGFQPDNLNSKGKLDLIKGQSDTSSGG-----NSRLRNKNI 209

Query: 862  HGVLNVVSWGIMFPLGVIIARYLRTFQSADPAWFYLHVFCQFSAYVIGVTGWSTGLKLGS 683
            HG LN VSWGIM P+G++IARYLRTF+   PAWFYLHV CQ SAY IGV GW+TGLKLG 
Sbjct: 210  HGXLNAVSWGIMLPIGMMIARYLRTFRJFHPAWFYLHVSCQVSAYAIGVAGWATGLKLGG 269

Query: 682  QSKGIRYTYHRNIGIALFSFATLQIFALFLRPKKEHKYRTFWNXXXXXXXXXXXXXXXIN 503
            QSKG++YT HR IGI LFS ATLQ+FALFLRPKK+HKYR +WN                N
Sbjct: 270  QSKGVQYTTHRYIGITLFSLATLQVFALFLRPKKDHKYRFYWNIYHHGIGYAIVVLGIFN 329

Query: 502  VFQGLDILDPEKKWRAAYXXXXXXXXXXXXXLEAITWIIVLKRKSKKSTKPYDG 341
            VF+GL+ILDP+KKW++AY             LE ITWI+V+KRKS +  K YDG
Sbjct: 330  VFKGLEILDPQKKWKSAYIILLIILGGIALFLEVITWIVVVKRKSSEPKKAYDG 383


>ref|XP_002533060.1| dopamine beta-monooxygenase, putative [Ricinus communis]
            gi|223527158|gb|EEF29330.1| dopamine beta-monooxygenase,
            putative [Ricinus communis]
          Length = 399

 Score =  392 bits (1006), Expect = e-106
 Identities = 206/360 (57%), Positives = 246/360 (68%), Gaps = 4/360 (1%)
 Frame = -1

Query: 1399 NRLFEHCNDLPKLSSYLHYTYNPSKSTLNLAFIASPAKTNGWIAWAINPLAPKMIGSQAL 1220
            N L+ +C DLP L+SYLHYTY+ S STL++AF++SP+ +NGWI+WAINP    M G+QAL
Sbjct: 37   NNLYTNCLDLPSLTSYLHYTYDSSNSTLSVAFLSSPSSSNGWISWAINPTGTGMAGAQAL 96

Query: 1219 IAYKQDNGLMTVKAFNVTSYKGVGE-PSKIAFDVPEMEAEVVNGVMRIYAVIVLPKSMGT 1043
            +AYK   G MTVK +N++SY        K+AFDV +  AE  NGVM++YA I +P  +  
Sbjct: 97   VAYKDSKGAMTVKTYNISSYTSDSVVQQKLAFDVWDERAEEENGVMKMYAKIKVPADLSA 156

Query: 1042 --VLNHVWQVGSSVTN-GIPDVHGFKDDNLKSVATLDLTKXXXXXXXXXXXGVVNSRLRK 872
                N VWQVG SV + G+   H     NL S  TL L               V+SR +K
Sbjct: 157  KGTANQVWQVGPSVDDKGVLKPHPMGASNLNSKGTLALNGGDQTTVVTGG---VDSRTKK 213

Query: 871  KNIHGVLNVVSWGIMFPLGVIIARYLRTFQSADPAWFYLHVFCQFSAYVIGVTGWSTGLK 692
            +NIHGVLN VSWGI+FP+GVIIARYLRTFQSADPAWFYLHV CQ SAY IGV GW+TGLK
Sbjct: 214  RNIHGVLNGVSWGILFPVGVIIARYLRTFQSADPAWFYLHVSCQVSAYAIGVAGWATGLK 273

Query: 691  LGSQSKGIRYTYHRNIGIALFSFATLQIFALFLRPKKEHKYRTFWNXXXXXXXXXXXXXX 512
            LGS+SKGI+YT HRNIGIALFS ATLQIFALFLRPKK+HKYR +WN              
Sbjct: 274  LGSESKGIQYTPHRNIGIALFSLATLQIFALFLRPKKDHKYRFYWNIYHHGVGYAILILG 333

Query: 511  XINVFQGLDILDPEKKWRAAYXXXXXXXXXXXXXLEAITWIIVLKRKSKKSTKPYDGQNG 332
             +NVF+GLDIL PE KW++AY             LE ITWI+VL R+S KSTKPYDG NG
Sbjct: 334  ILNVFKGLDILQPEGKWKSAYIVVIAVLGGIALLLETITWIVVL-RRSNKSTKPYDGYNG 392


>ref|XP_002301814.1| predicted protein [Populus trichocarpa] gi|222843540|gb|EEE81087.1|
            predicted protein [Populus trichocarpa]
          Length = 369

 Score =  388 bits (996), Expect = e-105
 Identities = 198/361 (54%), Positives = 246/361 (68%), Gaps = 5/361 (1%)
 Frame = -1

Query: 1399 NRLFEHCNDLPKLSSYLHYTYNPSKSTLNLAFIASPAKTNGWIAWAINPLAPKMIGSQAL 1220
            N L+ HC DLP LSSYLH+TY+ + STL++AF ASP+K+NGWI+WAINP    M G+QAL
Sbjct: 11   NNLYTHCLDLPTLSSYLHFTYDAANSTLSVAFFASPSKSNGWISWAINPKVAAMGGAQAL 70

Query: 1219 IAYKQDNGLMTVKAFNV-TSYKGVGEPSKIAFDVPEMEAEVVNGVMRIYAVIVLPKSMGT 1043
            +A+K   G+M+ K +N+ TS     E SK+AFDV +  AE  +GVMRI+A I +P  +  
Sbjct: 71   VAFKDSKGVMSAKTYNISTSTPYSVEQSKLAFDVWDTRAEEESGVMRIFAKIKVPPELAA 130

Query: 1042 --VLNHVWQVGSSV--TNGIPDVHGFKDDNLKSVATLDLTKXXXXXXXXXXXGVVNSRLR 875
               LN VWQVGS+V    G+  +H     NL S  TLDL               ++SR +
Sbjct: 131  KGTLNQVWQVGSTVGAAKGVLTIHDMGAPNLNSKGTLDLNGGKSVSSGG-----LDSRTK 185

Query: 874  KKNIHGVLNVVSWGIMFPLGVIIARYLRTFQSADPAWFYLHVFCQFSAYVIGVTGWSTGL 695
            +KNIHGVLN VSWGI+FPLG++IARYLRTF SADPAWFYLHV CQ SAY IGV GW+TG+
Sbjct: 186  RKNIHGVLNAVSWGILFPLGIVIARYLRTFPSADPAWFYLHVSCQVSAYAIGVAGWATGI 245

Query: 694  KLGSQSKGIRYTYHRNIGIALFSFATLQIFALFLRPKKEHKYRTFWNXXXXXXXXXXXXX 515
            KLGS+SKG++++ HRNIGIALF+ AT+QIFALFLRPKK+HKYR +WN             
Sbjct: 246  KLGSESKGVQFSLHRNIGIALFALATVQIFALFLRPKKDHKYRFYWNIYHHGVGYAILIL 305

Query: 514  XXINVFQGLDILDPEKKWRAAYXXXXXXXXXXXXXLEAITWIIVLKRKSKKSTKPYDGQN 335
              +NVF+GLDIL P  KWR  Y             LE ITWI+VL+RKS KSTKPY+G  
Sbjct: 306  GILNVFKGLDILQPGDKWRTIYIIAIAVLGGIAALLELITWIVVLRRKSSKSTKPYEGYG 365

Query: 334  G 332
            G
Sbjct: 366  G 366


>gb|ABK94382.1| unknown [Populus trichocarpa]
          Length = 396

 Score =  388 bits (996), Expect = e-105
 Identities = 198/361 (54%), Positives = 246/361 (68%), Gaps = 5/361 (1%)
 Frame = -1

Query: 1399 NRLFEHCNDLPKLSSYLHYTYNPSKSTLNLAFIASPAKTNGWIAWAINPLAPKMIGSQAL 1220
            N L+ HC DLP LSSYLH+TY+ + STL++AF ASP+K+NGWI+WAINP    M G+QAL
Sbjct: 37   NNLYTHCLDLPTLSSYLHFTYDAANSTLSVAFFASPSKSNGWISWAINPKVAAMGGAQAL 96

Query: 1219 IAYKQDNGLMTVKAFNV-TSYKGVGEPSKIAFDVPEMEAEVVNGVMRIYAVIVLPKSMGT 1043
            +A+K   G+M+ K +N+ TS     E SK+AFDV +  AE  +GVMRI+A I +P  +  
Sbjct: 97   VAFKDSKGVMSAKTYNISTSTPYSVEQSKLAFDVWDTRAEEESGVMRIFAKIKVPPELAA 156

Query: 1042 --VLNHVWQVGSSV--TNGIPDVHGFKDDNLKSVATLDLTKXXXXXXXXXXXGVVNSRLR 875
               LN VWQVGS+V    G+  +H     NL S  TLDL               ++SR +
Sbjct: 157  KGTLNQVWQVGSTVGAAKGVLTIHDMGAPNLNSKGTLDLNGGKSVSSGG-----LDSRTK 211

Query: 874  KKNIHGVLNVVSWGIMFPLGVIIARYLRTFQSADPAWFYLHVFCQFSAYVIGVTGWSTGL 695
            +KNIHGVLN VSWGI+FPLG++IARYLRTF SADPAWFYLHV CQ SAY IGV GW+TG+
Sbjct: 212  RKNIHGVLNAVSWGILFPLGIVIARYLRTFPSADPAWFYLHVSCQVSAYAIGVAGWATGI 271

Query: 694  KLGSQSKGIRYTYHRNIGIALFSFATLQIFALFLRPKKEHKYRTFWNXXXXXXXXXXXXX 515
            KLGS+SKG++++ HRNIGIALF+ AT+QIFALFLRPKK+HKYR +WN             
Sbjct: 272  KLGSESKGVQFSLHRNIGIALFALATVQIFALFLRPKKDHKYRFYWNIYHHGVGYAILIL 331

Query: 514  XXINVFQGLDILDPEKKWRAAYXXXXXXXXXXXXXLEAITWIIVLKRKSKKSTKPYDGQN 335
              +NVF+GLDIL P  KWR  Y             LE ITWI+VL+RKS KSTKPY+G  
Sbjct: 332  GILNVFKGLDILQPGDKWRTIYIIAIAVLGGIAALLELITWIVVLRRKSSKSTKPYEGYG 391

Query: 334  G 332
            G
Sbjct: 392  G 392


Top