BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000573
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]      139   2e-31
pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting ...   139   2e-31
sp|P12329.1|CB21_MAIZE RecName: Full=Chlorophyll a-b binding pro...   139   2e-31
gb|AFW81158.1| light harvesting chlorophyll a/b binding protein3...   139   2e-31
gb|AFK40061.1| unknown [Medicago truncatula]                          139   2e-31

>gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]
          Length = 266

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = +2

Query: 2   GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 181
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 239

Query: 182 LENLADH 202
           LENLADH
Sbjct: 240 LENLADH 246


>pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting Chlorophyll AB
           Protein Complex From Pea Thylakoid Membranes
          Length = 232

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = +2

Query: 2   GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 181
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 146 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 205

Query: 182 LENLADH 202
           LENLADH
Sbjct: 206 LENLADH 212


>sp|P12329.1|CB21_MAIZE RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
           AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
           Precursor gi|22224|emb|CAA32900.1| unnamed protein
           product [Zea mays] gi|194699340|gb|ACF83754.1| unknown
           [Zea mays] gi|195607416|gb|ACG25538.1| chlorophyll a-b
           binding protein 2 [Zea mays] gi|195613460|gb|ACG28560.1|
           chlorophyll a-b binding protein 2 [Zea mays]
           gi|414886622|tpg|DAA62636.1| TPA: light harvesting
           chlorophyll a/b binding protein2 [Zea mays]
          Length = 262

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = +2

Query: 2   GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 181
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 176 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 235

Query: 182 LENLADH 202
           LENLADH
Sbjct: 236 LENLADH 242


>gb|AFW81158.1| light harvesting chlorophyll a/b binding protein3 [Zea mays]
          Length = 302

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = +2

Query: 2   GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 181
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 216 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 275

Query: 182 LENLADH 202
           LENLADH
Sbjct: 276 LENLADH 282


>gb|AFK40061.1| unknown [Medicago truncatula]
          Length = 266

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = +2

Query: 2   GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 181
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 239

Query: 182 LENLADH 202
           LENLADH
Sbjct: 240 LENLADH 246