BLASTX nr result
ID: Coptis23_contig00000558
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00000558
(1872 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like ... 525 e-146
emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera] 525 e-146
ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Popu... 447 e-123
ref|XP_002516384.1| transcription factor, putative [Ricinus comm... 415 e-113
ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like ... 408 e-111
>ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 525 bits (1353), Expect = e-146
Identities = 309/558 (55%), Positives = 369/558 (66%), Gaps = 28/558 (5%)
Frame = +2
Query: 281 MEKE-FFMNANS---PPTHLRSFRPQGMEVEATEERLPNCFLNLNWENSMDHSVPFESAL 448
MEKE FMN + PP Q E+ + + + NCFLN NW+NSMD S PFESAL
Sbjct: 1 MEKERLFMNEGNCITPPNWNLGMEIQSNELNCSSQAVQNCFLNPNWDNSMDQSDPFESAL 60
Query: 449 SSFVSSPAGSNSRGQ-SESIVIRELIGRLGSICNSNDIATQQSQTLNYMGEXXXXXXXXX 625
SS VSSP GS++ G +SI IRELIGRLGSICNS +I+ Q G
Sbjct: 61 SSIVSSPVGSSAGGMPGDSIAIRELIGRLGSICNSGEISPQSYIGGGGHGNTNNSNNTSC 120
Query: 626 XXXPLNSPPKLNNLSMLDHQLS----------MPAHPSLAPLPADPGFAERAARFSCFGT 775
PLNSPPKLN LS++DHQ +P HPSLAP PADPGFAERAARFSCFGT
Sbjct: 121 YNTPLNSPPKLN-LSIMDHQQHQIRTNFPTNHLPTHPSLAPFPADPGFAERAARFSCFGT 179
Query: 776 RNLGGVMGQFGFNETTRPMEN--GKLSRVSSSQSLKATGSQMGGQENKDYQLQERLESEM 949
N G+ QFG N+T P + GKLSRVSS+QS KA GSQ+G QE KD +
Sbjct: 180 GNFSGLSAQFGLNDTELPYRSSTGKLSRVSSNQSFKAAGSQLGAQEFKDRSPPQD----- 234
Query: 950 RYISASDRKFSKLSRSSSPENSEFTNA----VASESTPIEEANLRGLNEV------SXXX 1099
+SASD+K K+SRSS+P+N+E ++ SE P E +L+G N+ S
Sbjct: 235 -GVSASDKKLGKISRSSTPDNTELGDSREESSVSEQIPGGETSLKGQNDANGRKRKSIPR 293
Query: 1100 XXXXXXXXXNSFKEAKEVKEDDKSNAKRCKSNETTGTEKVASKAKVEAXXXXXXXXXXXX 1279
S K+AK + D+SNAKR K +E +G+EK A+KAK EA
Sbjct: 294 GKAKEVPSSPSAKDAKVASDKDESNAKRSKPDEGSGSEKDAAKAKAEANGSTKSAGDGNQ 353
Query: 1280 XXXQNKETPKPSPEPLKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK 1459
Q+K+ PKP PE KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK
Sbjct: 354 K--QSKDNPKP-PEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK 410
Query: 1460 VTGKALMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNMEATLTKDLLQSRESLSQALY 1639
VTGKA+MLDEIINYVQSLQRQVEFLSMKLATVNPR+DFNMEA L+K++ QSR SL QA+Y
Sbjct: 411 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMEALLSKEIFQSRGSLPQAMY 470
Query: 1640 QLNSSAASFHYGHQ-AEGPPLQRHISNRAETQCSINPIDAALHRNSSTELPPLDGYGEAA 1816
L+SSA +F YG+Q +GP LQ I N ET S+NP+++A+ R SS LP +DG+GEAA
Sbjct: 471 PLDSSALAFPYGYQPQQGPSLQNGIPNGTETPFSVNPLNSAIRRTSSM-LPSIDGFGEAA 529
Query: 1817 AHFANFWEDDLQSVVQMG 1870
+ + FWED+L SVVQMG
Sbjct: 530 SQVSTFWEDELHSVVQMG 547
>emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 525 bits (1353), Expect = e-146
Identities = 309/558 (55%), Positives = 369/558 (66%), Gaps = 28/558 (5%)
Frame = +2
Query: 281 MEKE-FFMN---ANSPPTHLRSFRPQGMEVEATEERLPNCFLNLNWENSMDHSVPFESAL 448
MEKE FMN +PP Q E+ + + + NCFLN NW+NSMD S PFESAL
Sbjct: 1 MEKERLFMNEGNCTTPPNWNFGMEIQSNELNCSSQAVQNCFLNPNWDNSMDQSDPFESAL 60
Query: 449 SSFVSSPAGSNSRGQ-SESIVIRELIGRLGSICNSNDIATQQSQTLNYMGEXXXXXXXXX 625
SS VSSP GS++ G +SI IRELIGRLGSICNS +I+ Q G
Sbjct: 61 SSIVSSPVGSSAGGMPGDSIAIRELIGRLGSICNSGEISPQSYIGGGGHGNTNNSNNTSC 120
Query: 626 XXXPLNSPPKLNNLSMLDHQLS----------MPAHPSLAPLPADPGFAERAARFSCFGT 775
PLNSPPKLN LS++DHQ +P HPSLAP PADPGFAERAARFSCFGT
Sbjct: 121 YNTPLNSPPKLN-LSIMDHQQHQIRTNFPTNHLPTHPSLAPFPADPGFAERAARFSCFGT 179
Query: 776 RNLGGVMGQFGFNETTRPMEN--GKLSRVSSSQSLKATGSQMGGQENKDYQLQERLESEM 949
N G+ QFG N+T P + GKLSRVSS+QS KA GSQ+G QE KD +
Sbjct: 180 GNFSGLSAQFGLNDTELPYRSSTGKLSRVSSNQSFKAAGSQLGAQEFKDRSPPQD----- 234
Query: 950 RYISASDRKFSKLSRSSSPENSEFTNA----VASESTPIEEANLRGLNEV------SXXX 1099
+SASD+K K+SRSS+P+N+E ++ SE P E +L+G N+ S
Sbjct: 235 -GVSASDKKLGKISRSSTPDNAELGDSREESSVSEQIPGGETSLKGQNDANGRKRKSIPR 293
Query: 1100 XXXXXXXXXNSFKEAKEVKEDDKSNAKRCKSNETTGTEKVASKAKVEAXXXXXXXXXXXX 1279
S K+AK + D+SNAKR K +E +G+EK A+KAK EA
Sbjct: 294 GKAKEVPSSPSAKDAKVASDKDESNAKRSKPDEGSGSEKDAAKAKAEANGSTKSAGDGNQ 353
Query: 1280 XXXQNKETPKPSPEPLKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK 1459
Q+K+ PKP PE KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK
Sbjct: 354 K--QSKDNPKP-PEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK 410
Query: 1460 VTGKALMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNMEATLTKDLLQSRESLSQALY 1639
VTGKA+MLDEIINYVQSLQRQVEFLSMKLATVNPR+DFNMEA L+K++ QSR SL QA+Y
Sbjct: 411 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMEALLSKEIFQSRGSLPQAMY 470
Query: 1640 QLNSSAASFHYGHQ-AEGPPLQRHISNRAETQCSINPIDAALHRNSSTELPPLDGYGEAA 1816
L+SSA +F YG+Q +GP LQ I N ET S+NP+++A+ R SS LP +DG+GEAA
Sbjct: 471 PLDSSALAFPYGYQPQQGPSLQNGIPNGTETPFSVNPLNSAIRRTSSM-LPSIDGFGEAA 529
Query: 1817 AHFANFWEDDLQSVVQMG 1870
+ + FWED+L SVVQMG
Sbjct: 530 SQVSTFWEDELHSVVQMG 547
>ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein
POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 447 bits (1149), Expect = e-123
Identities = 276/549 (50%), Positives = 343/549 (62%), Gaps = 41/549 (7%)
Frame = +2
Query: 347 GMEVEATE-----ERLPNCFLNLNWENSMDHSVPFESALSSFVSSPAGSNSRGQS----- 496
GME++A E E+L NCFLN NW+NS+D S PFESALSS VSSP S + +
Sbjct: 25 GMEMQANELSCGPEKLANCFLNPNWDNSLDQSDPFESALSSIVSSPVASGANANANAIPN 84
Query: 497 -----ESIVIRELIGRLGSICNSNDIATQQSQTLNYMGEXXXXXXXXXXXXPLNSPPKLN 661
+S++IRELIGRLG+ICNS DI+ Q +++ P+NSPPKLN
Sbjct: 85 AGVGGDSLMIRELIGRLGNICNSGDISLQ-----SFVNNNNNSTNTSCYSTPMNSPPKLN 139
Query: 662 NLSMLDHQL---------SMPAHPSLAPLPADPGFAERAARFSCFGTRNLGGVMGQFGFN 814
LSM+D Q+ S+ HP LAP PAD F ERAAR+SCFG+ N GG+ QFG N
Sbjct: 140 -LSMMDSQMRGNLPIPGNSVVKHPGLAPFPAD--FVERAARYSCFGSNNPGGINKQFGLN 196
Query: 815 ETTR------PMENGKLSRVSSSQSLKATGSQMGGQE-NKDYQLQERLESEMRYISASDR 973
E+ +E GKLSRVSS+ S+K T SQ QE NK L SE +
Sbjct: 197 ESELINRLMPRVEPGKLSRVSSNNSMKVTVSQANVQESNKSSPQDGSLNSE--------K 248
Query: 974 KFSKLSRSSSPENSEFTNAVA-SESTPIEEANLRGLNEVSXXXXXXXXXXXXN------- 1129
KFS+ SR ++ EN + + SE P + +++ N+ +
Sbjct: 249 KFSRQSRPTTSENGDSREESSLSEQVPGGKLSMKSQNDANSRKRKSIPRGKAKETPSSSP 308
Query: 1130 SFKEAKEVKEDDKSNAKRCKSNETTGTEKVASKAKVEAXXXXXXXXXXXXXXXQNKETPK 1309
S + K E+D+S AKR KS+ET G++K +K K E QNK K
Sbjct: 309 SASDVKVAAENDESKAKRSKSDETNGSDKDTAKEKEEENGNQK----------QNKNNSK 358
Query: 1310 PSPEPLKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKALMLDE 1489
P PEP KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKA+MLDE
Sbjct: 359 P-PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 417
Query: 1490 IINYVQSLQRQVEFLSMKLATVNPRLDFNMEATLTKDLLQSRESLSQALYQLNSSAASFH 1669
IINYVQSLQRQVEFLSMKL++VNPR++ NME L+KD+ QSR S+ +LY L++S F
Sbjct: 418 IINYVQSLQRQVEFLSMKLSSVNPRMEINMETLLSKDIFQSRGSMPHSLYPLDASTPVFP 477
Query: 1670 YGHQA-EGPPLQRHISNRAETQCSINPIDAALHRNSSTELPPLDGYGEAAAHFAN-FWED 1843
YG+Q+ +G LQ + + AETQ S+NP++AAL RN S LP LDG+G+ AA A+ WED
Sbjct: 478 YGYQSQQGLALQNGMPSNAETQFSMNPLNAALRRNPSMHLPHLDGFGDPAALQASAMWED 537
Query: 1844 DLQSVVQMG 1870
DLQSVVQMG
Sbjct: 538 DLQSVVQMG 546
>ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor,
putative [Ricinus communis]
Length = 534
Score = 415 bits (1067), Expect = e-113
Identities = 286/567 (50%), Positives = 345/567 (60%), Gaps = 37/567 (6%)
Frame = +2
Query: 281 MEKE-FFMN--ANSPPTHLRSFRPQGMEVEATEE----RLPNCFLNLNWENSMDHSVPFE 439
MEKE FM+ NS + + GME+ ++ E ++PN F N NWENSMD S PFE
Sbjct: 1 MEKEKLFMSEGVNSREVPIWNSCNFGMEISSSNELNSDQIPNSFFNSNWENSMDQSDPFE 60
Query: 440 SALSSFVSSP---AGSNSRGQSESIVIRELIGRLGSICNSNDIATQQSQTLNYMGEXXXX 610
SALSS VSSP A NS G + ++IRELIGRLG+ICNS DI+ Q N
Sbjct: 61 SALSSIVSSPNANAVPNSNG--DPVMIRELIGRLGNICNSRDISPQSYINTNNNNSTNTS 118
Query: 611 XXXXXXXXPLNSPPKLNNLSMLDHQL----------SMPAHPSLAPLPADPGFAERAARF 760
PLNSPPKLN +S+LD Q+ ++P SLAPLPADPGF ERAARF
Sbjct: 119 CYTT----PLNSPPKLN-ISILDSQIRGNTNTNNSHNLPI-ASLAPLPADPGFVERAARF 172
Query: 761 SCFGT-RNLGGVMGQFGFNETTRPMENGKLSRVSSSQSLKATGSQMGGQENKDYQLQERL 937
SCFG+ RNL G+ GQFG NE++ LSR+ ATGSQ+ + +
Sbjct: 173 SCFGSSRNLSGLSGQFGSNESSF------LSRIP------ATGSQVNASNVQQAVADGKP 220
Query: 938 ESEMRYISASDRKFSKLSRSSSPENSEFTNA----VASESTPIEEANLRGLNEVSXXXXX 1105
S DRK + +SRSS+PEN+EF ++ SE P E +++ N
Sbjct: 221 NS--------DRKLNVISRSSTPENAEFGDSREESSLSEQIPGGELSIKVQNNNDFSVRK 272
Query: 1106 XXXXXXXN---------SFKEAKEVKEDDKSNAKRCKSNETTGTEKVASKAKVEAXXXXX 1258
S + K E D+S AKR KS+E G +K AK E
Sbjct: 273 RKAIPRGKAKETPSSSPSASDVKVAAEKDESTAKRSKSDEANGHDK----AKAEQNGNQK 328
Query: 1259 XXXXXXXXXXQNKETPKPSPEPLKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 1438
QNK+ K PEP KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD
Sbjct: 329 ----------QNKDNTK-LPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 377
Query: 1439 LVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNMEATLTKDLLQSRE 1618
LVPGCNKVTGKA+MLDEIINYVQSLQRQVEFLSMKLATVNPR+D NMEA L+KD+ QS
Sbjct: 378 LVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDVNMEA-LSKDVFQSFG 436
Query: 1619 SLSQALYQLNSSAA-SFHYGHQA-EGPPLQRHISNRAETQCSINPIDAALHRNSSTELPP 1792
SL +LY L+SSAA + Y +Q+ +G PL +S+ AETQ S+N A L RN S +LPP
Sbjct: 437 SLPHSLYPLDSSAALALPYSYQSQQGVPLPNDMSSNAETQFSMN---ALLRRNHSMQLPP 493
Query: 1793 LDGYGEAAA-HFANFWEDDLQSVVQMG 1870
LDG+G+AAA + FWE++LQSVVQMG
Sbjct: 494 LDGFGDAAARQVSAFWEEELQSVVQMG 520
>ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription
factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 408 bits (1048), Expect = e-111
Identities = 262/557 (47%), Positives = 324/557 (58%), Gaps = 27/557 (4%)
Frame = +2
Query: 281 MEKEFFMNANSPPTHLRSFRPQGMEVEATEERLPNCFLNLNWENSMDHSVPFESALSSFV 460
MEKEFFMN + GME++ E LN NWENSMDHS FES LSS V
Sbjct: 1 MEKEFFMNDGGCSFY-------GMEIQPNELNSSGGLLNPNWENSMDHSDLFESTLSSIV 53
Query: 461 SSPA------GSNSRGQSESIVIRELIGRLGSICNSNDIATQQSQTLNYMG-EXXXXXXX 619
SSPA G G +++++RELIGRLGSICNS +I+ +Y+G
Sbjct: 54 SSPANSHIIGGGGGGGGGDNLMMRELIGRLGSICNSGEISPH-----SYIGGTNNNSTNT 108
Query: 620 XXXXXPLNSPPKLNNLSMLDHQLS---MPAHPSLAPLPADPGFAERAARFSCFGTRNLGG 790
PLNSPPKLN S+++ Q+ +P H +LAP DPGFAERAARFSCFG RNLGG
Sbjct: 109 SCYNTPLNSPPKLNLSSIMESQIRGNLIPHHQNLAPFSTDPGFAERAARFSCFGNRNLGG 168
Query: 791 VMGQFGFNETTR---------PMENGKLSRVSSSQSLKATG---SQMGGQENKDYQLQER 934
+ GQ G NET +E+GKLSRVSS++S G QM QE +Q+
Sbjct: 169 LNGQLGSNETQELSNRSMAGAGVESGKLSRVSSNKSFNIGGVGSPQMVVQEGDQSPVQKG 228
Query: 935 LESEMRYISASDRKFSKLSRSSSPENSEFTN--AVASESTPIEEANLRGLNEVSXXXXXX 1108
+ S+R SRSS+PEN+ + + SE PI E+ L+G E +
Sbjct: 229 NSMPIPNKKVSNR----FSRSSTPENAGDSREGSSVSEQNPIGESGLKGKAETNTRKRKS 284
Query: 1109 XXXXXXNSFKEAKEVKEDDKSNAKRCKSNETTGTEKVASKAKVEAXXXXXXXXXXXXXXX 1288
K+ K E+ + N K+ K +E T E +K K EA
Sbjct: 285 VQT---GQAKDVKAAVENHEPNGKKIKPDEVTKKEIDGAKGKAEAKSSGDANQK------ 335
Query: 1289 QNKETPKPSPEPLKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 1468
QN ++ KP PEP KDYIHVRARRGQATDSHSLAERVRREKIS+RMKFLQDLVPGCNKVTG
Sbjct: 336 QNNDSSKP-PEPPKDYIHVRARRGQATDSHSLAERVRREKISKRMKFLQDLVPGCNKVTG 394
Query: 1469 KALMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNMEATLTKDLLQSRESLSQALYQLN 1648
KA+MLDEIINYVQSLQRQVEFLSMKLATVNPR+DFNME + KD+ + S S +Y ++
Sbjct: 395 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMETLVPKDIFKGPGSSSHTVYPMD 454
Query: 1649 SSAASFHYGHQA-EGPPLQRHISNRAETQCSINPIDAALHRNSSTELPPLDGYGEA--AA 1819
SS F Y +Q+ PL I N E Q S+ + + RN S ++ +GY E
Sbjct: 455 SSVPQFAYDYQSMHVTPLHSGIPNGTEKQFSVASANDVMQRNLSGQM--TNGYNEVVNGI 512
Query: 1820 HFANFWEDDLQSVVQMG 1870
+ FWED+L +VVQMG
Sbjct: 513 QISKFWEDELHTVVQMG 529