BLASTX nr result

ID: Coptis23_contig00000554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000554
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281891.1| PREDICTED: protein translation factor SUI1 h...   220   3e-55
gb|ADV04053.1| eukaryotic translation initiation factor 2 [Hevea...   220   3e-55
ref|XP_002280157.1| PREDICTED: protein translation factor SUI1 h...   220   3e-55
ref|XP_004159225.1| PREDICTED: protein translation factor SUI1 h...   219   8e-55
gb|ACF06581.1| translational initiation factor eIF1 [Elaeis guin...   218   1e-54

>ref|XP_002281891.1| PREDICTED: protein translation factor SUI1 homolog isoform 2 [Vitis
           vinifera] gi|225461085|ref|XP_002281872.1| PREDICTED:
           protein translation factor SUI1 homolog isoform 1 [Vitis
           vinifera] gi|297735962|emb|CBI23936.3| unnamed protein
           product [Vitis vinifera]
          Length = 113

 Score =  220 bits (561), Expect = 3e-55
 Identities = 107/113 (94%), Positives = 111/113 (98%)
 Frame = -2

Query: 590 MSELDVQIPTTFDPFAEANAEDSGAGSKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 411
           MSELD+QIPT FDPFAEANAEDSGAGSK+YVH+RIQQRNGRKSLTTVQGL+KEFSYNKIL
Sbjct: 1   MSELDIQIPTAFDPFAEANAEDSGAGSKDYVHIRIQQRNGRKSLTTVQGLRKEFSYNKIL 60

Query: 410 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKESIKIHGF 252
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKE IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEDIKIHGF 113


>gb|ADV04053.1| eukaryotic translation initiation factor 2 [Hevea brasiliensis]
          Length = 113

 Score =  220 bits (560), Expect = 3e-55
 Identities = 107/113 (94%), Positives = 112/113 (99%)
 Frame = -2

Query: 590 MSELDVQIPTTFDPFAEANAEDSGAGSKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 411
           MSEL+ QIPTTFDPFA+ANAEDSGAG+KEYVH+RIQQRNGRKSLTTVQGLKKEFSYNKIL
Sbjct: 1   MSELETQIPTTFDPFADANAEDSGAGAKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 410 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKESIKIHGF 252
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKE+IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 113


>ref|XP_002280157.1| PREDICTED: protein translation factor SUI1 homolog 1 isoform 2
           [Vitis vinifera] gi|359485573|ref|XP_003633291.1|
           PREDICTED: protein translation factor SUI1 homolog 1
           [Vitis vinifera] gi|297739300|emb|CBI28951.3| unnamed
           protein product [Vitis vinifera]
          Length = 113

 Score =  220 bits (560), Expect = 3e-55
 Identities = 108/113 (95%), Positives = 111/113 (98%)
 Frame = -2

Query: 590 MSELDVQIPTTFDPFAEANAEDSGAGSKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 411
           MSELD  IPTTFDPFA+ANAEDSGAG+KEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL
Sbjct: 1   MSELDANIPTTFDPFADANAEDSGAGTKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 410 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKESIKIHGF 252
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKE+IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 113


>ref|XP_004159225.1| PREDICTED: protein translation factor SUI1 homolog [Cucumis
           sativus]
          Length = 177

 Score =  219 bits (557), Expect = 8e-55
 Identities = 107/117 (91%), Positives = 113/117 (96%)
 Frame = -2

Query: 602 RPRFMSELDVQIPTTFDPFAEANAEDSGAGSKEYVHVRIQQRNGRKSLTTVQGLKKEFSY 423
           +P FMSE +VQIP+ FDPFA+ANAEDSGAG+KEYVHVRIQQRNGRKS TTVQGLKKEFSY
Sbjct: 61  QPSFMSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSPTTVQGLKKEFSY 120

Query: 422 NKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKESIKIHGF 252
           NKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKE+IKIHGF
Sbjct: 121 NKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 177


>gb|ACF06581.1| translational initiation factor eIF1 [Elaeis guineensis]
          Length = 113

 Score =  218 bits (556), Expect = 1e-54
 Identities = 107/113 (94%), Positives = 111/113 (98%)
 Frame = -2

Query: 590 MSELDVQIPTTFDPFAEANAEDSGAGSKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 411
           MS+LDVQIPT FDPFAEANA+DSGAG+KEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL
Sbjct: 1   MSDLDVQIPTAFDPFAEANADDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 410 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKESIKIHGF 252
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNV+TFLVQAGIVKKE IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIVKKEHIKIHGF 113


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