BLASTX nr result

ID: Coptis23_contig00000528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000528
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ92671.1| ERD protein [Vitis amurensis]                          156   3e-36
ref|XP_003633435.1| PREDICTED: uncharacterized protein LOC100248...   156   3e-36
emb|CBI25409.3| unnamed protein product [Vitis vinifera]              154   1e-35
ref|XP_004138406.1| PREDICTED: protein EARLY RESPONSIVE TO DEHYD...   146   3e-33
gb|AAQ18141.1| poly(A)-binding protein C-terminal interacting pr...   141   1e-31

>gb|AFJ92671.1| ERD protein [Vitis amurensis]
          Length = 140

 Score =  156 bits (395), Expect = 3e-36
 Identities = 82/142 (57%), Positives = 101/142 (71%), Gaps = 2/142 (1%)
 Frame = -2

Query: 666 VAMEVISR--PNSSSLNPNAPMFIPGAYREVVDFSDQWWELVNSSAWFRDYWLQECFQDP 493
           +AMEVISR  P+SS+LNPNAP+F+P AYR V DFSDQWW LV SS WFRDYWLQECFQDP
Sbjct: 1   MAMEVISRTAPSSSTLNPNAPLFVPLAYRTVEDFSDQWWALVQSSPWFRDYWLQECFQDP 60

Query: 492 EYDLDFSQNDEPVLPEIESVFDGYTNKHDDEEEKDYFTELVSLGSMKYRRSRGGVAENPK 313
           E D      D+P LP+I+++FD  T     EEEK++  ELVSLG++K+R++R  V   P+
Sbjct: 61  ETDPYCYDIDDPALPDIDALFDDCTGS-KAEEEKEHQRELVSLGALKWRKTRDPVV-TPR 118

Query: 312 YFEXXXXXXXXXXXPRPIQQPR 247
           +FE           PRPIQQPR
Sbjct: 119 HFEKAPKIVNVKVSPRPIQQPR 140


>ref|XP_003633435.1| PREDICTED: uncharacterized protein LOC100248433 [Vitis vinifera]
          Length = 140

 Score =  156 bits (395), Expect = 3e-36
 Identities = 82/142 (57%), Positives = 101/142 (71%), Gaps = 2/142 (1%)
 Frame = -2

Query: 666 VAMEVISR--PNSSSLNPNAPMFIPGAYREVVDFSDQWWELVNSSAWFRDYWLQECFQDP 493
           +AMEVISR  P+SS+LNPNAP+F+P AYR V DFSDQWW LV SS WFRDYWLQECFQDP
Sbjct: 1   MAMEVISRTPPSSSTLNPNAPLFVPLAYRTVEDFSDQWWALVQSSPWFRDYWLQECFQDP 60

Query: 492 EYDLDFSQNDEPVLPEIESVFDGYTNKHDDEEEKDYFTELVSLGSMKYRRSRGGVAENPK 313
           E D      D+P LP+I+++FD  T     EEEK++  ELVSLG++K+R++R  V   P+
Sbjct: 61  ETDPYCYDIDDPALPDIDALFDDCTGS-KAEEEKEHQRELVSLGALKWRKTRDPVV-TPR 118

Query: 312 YFEXXXXXXXXXXXPRPIQQPR 247
           +FE           PRPIQQPR
Sbjct: 119 HFEKAPKIVSVKVSPRPIQQPR 140


>emb|CBI25409.3| unnamed protein product [Vitis vinifera]
          Length = 138

 Score =  154 bits (390), Expect = 1e-35
 Identities = 81/140 (57%), Positives = 99/140 (70%), Gaps = 2/140 (1%)
 Frame = -2

Query: 660 MEVISR--PNSSSLNPNAPMFIPGAYREVVDFSDQWWELVNSSAWFRDYWLQECFQDPEY 487
           MEVISR  P+SS+LNPNAP+F+P AYR V DFSDQWW LV SS WFRDYWLQECFQDPE 
Sbjct: 1   MEVISRTPPSSSTLNPNAPLFVPLAYRTVEDFSDQWWALVQSSPWFRDYWLQECFQDPET 60

Query: 486 DLDFSQNDEPVLPEIESVFDGYTNKHDDEEEKDYFTELVSLGSMKYRRSRGGVAENPKYF 307
           D      D+P LP+I+++FD  T     EEEK++  ELVSLG++K+R++R  V   P++F
Sbjct: 61  DPYCYDIDDPALPDIDALFDDCTGS-KAEEEKEHQRELVSLGALKWRKTRDPVV-TPRHF 118

Query: 306 EXXXXXXXXXXXPRPIQQPR 247
           E           PRPIQQPR
Sbjct: 119 EKAPKIVSVKVSPRPIQQPR 138


>ref|XP_004138406.1| PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like isoform
           1 [Cucumis sativus] gi|449441274|ref|XP_004138407.1|
           PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION
           15-like isoform 2 [Cucumis sativus]
           gi|449520313|ref|XP_004167178.1| PREDICTED: protein
           EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis
           sativus]
          Length = 140

 Score =  146 bits (369), Expect = 3e-33
 Identities = 72/142 (50%), Positives = 100/142 (70%), Gaps = 4/142 (2%)
 Frame = -2

Query: 660 MEVISRPNSSS----LNPNAPMFIPGAYREVVDFSDQWWELVNSSAWFRDYWLQECFQDP 493
           M+V+++ NSSS    LNPNAP+F+P AYR V DFSDQWWEL+ SS WFR+YWLQE FQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 492 EYDLDFSQNDEPVLPEIESVFDGYTNKHDDEEEKDYFTELVSLGSMKYRRSRGGVAENPK 313
           + +L F +N+E +LP++ES FD +T +  +EEE ++  +LV +G+ K++++R G AE PK
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFT-RQQEEEELEFSKDLVPMGAFKWQKARSG-AEVPK 118

Query: 312 YFEXXXXXXXXXXXPRPIQQPR 247
           Y +           PR I QPR
Sbjct: 119 YAQKAPKIVNVKVSPRTIHQPR 140


>gb|AAQ18141.1| poly(A)-binding protein C-terminal interacting protein 6 [Cucumis
           sativus]
          Length = 141

 Score =  141 bits (356), Expect = 1e-31
 Identities = 66/121 (54%), Positives = 93/121 (76%), Gaps = 4/121 (3%)
 Frame = -2

Query: 660 MEVISRPNSSS----LNPNAPMFIPGAYREVVDFSDQWWELVNSSAWFRDYWLQECFQDP 493
           M+V+++ NSSS    LNPNAP+F+P AYR V DFSDQWWEL+ SS WFR+YWLQE FQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 492 EYDLDFSQNDEPVLPEIESVFDGYTNKHDDEEEKDYFTELVSLGSMKYRRSRGGVAENPK 313
           + +L F +N+E +LP++ES FD +T +  +EEE ++  +LV +G+ K++++R G AE PK
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFT-RQQEEEELEFSKDLVPMGAFKWQKARSG-AEVPK 118

Query: 312 Y 310
           Y
Sbjct: 119 Y 119


Top