BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000518
         (1601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634157.1| PREDICTED: protein TRANSPARENT TESTA GLABRA ...   538   e-150
ref|XP_002530884.1| WD-repeat protein, putative [Ricinus communi...   538   e-150
emb|CAN67365.1| hypothetical protein VITISV_033304 [Vitis vinifera]   534   e-149
gb|AEI55401.1| TTG1 [Rubus idaeus]                                    532   e-148
gb|AFY23208.1| transparent testa glabra 1 [Rosa rugosa]               531   e-148

>ref|XP_003634157.1| PREDICTED: protein TRANSPARENT TESTA GLABRA 1 isoform 1 [Vitis
            vinifera] gi|359490757|ref|XP_003634158.1| PREDICTED:
            protein TRANSPARENT TESTA GLABRA 1 isoform 2 [Vitis
            vinifera] gi|113707434|gb|ABF66625.2| WD-repeat 1 [Vitis
            vinifera]
          Length = 336

 Score =  538 bits (1386), Expect = e-150
 Identities = 263/343 (76%), Positives = 294/343 (85%), Gaps = 3/343 (0%)
 Frame = +3

Query: 147  SNSGQERSENLFTYDSPYPIYAMAFSSCDDNSKSQH---RIATGSFLEDLNNKVDILSFD 317
            S     RSEN  TY+SPYP+Y+MA SS      +QH   RIA GSF+E+L+N+VDI+SFD
Sbjct: 5    SQESHLRSENCVTYESPYPLYSMAISS-----STQHHHPRIAIGSFIEELSNRVDIVSFD 59

Query: 318  EETLAFKTHPNLSFDHPYPPTKLMFHPSKPNSPDLLASSGDFLRLWEIKEGGXXXXXXXX 497
            E+ LA +THP+LSFDHPYPPTKLMFHP+   SPD LASSG++LRLWE+++          
Sbjct: 60   EDALAIRTHPSLSFDHPYPPTKLMFHPNSRTSPDHLASSGEYLRLWEVRDNS-------- 111

Query: 498  XXVVQKSLLNNSKTSEFCAPLTSFDWNPVDPRRIGTSSIDTTCTIWDVERGVVETQLIAH 677
              +   S+LNNSKTSEFCAPLTSFDWN V+PRRIGTSSIDTTCTIWDVERGVVETQLIAH
Sbjct: 112  --IQPLSVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDVERGVVETQLIAH 169

Query: 678  DKEVYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPHPDTPLLRLAWNKQDLRY 857
            DKEVYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESP PDTPLLRLAWNKQD+RY
Sbjct: 170  DKEVYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDVRY 229

Query: 858  MATILMDSNKVVILDIRSPTMPVAELDRHRASVNAIAWAPQSPRHICSAGDDAQALIWEL 1037
            MATILMDSNK+VILDIRSPTMPVAEL+RHRASVNAI+WAPQS RHICS GDD+QALIWEL
Sbjct: 230  MATILMDSNKIVILDIRSPTMPVAELERHRASVNAISWAPQSSRHICSGGDDSQALIWEL 289

Query: 1038 PTVAGPNGIDPMLAYSADSEINQLQWSVLQPDWIAIAFASKMQ 1166
            PT+AGPNGIDPM  Y A SEINQLQWS  QP+WIAIAF++K+Q
Sbjct: 290  PTLAGPNGIDPMSVYLASSEINQLQWSAAQPEWIAIAFSNKLQ 332


>ref|XP_002530884.1| WD-repeat protein, putative [Ricinus communis]
            gi|223529537|gb|EEF31490.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 342

 Score =  538 bits (1385), Expect = e-150
 Identities = 268/346 (77%), Positives = 297/346 (85%), Gaps = 7/346 (2%)
 Frame = +3

Query: 150  NSGQE---RSENLFTYDSPYPIYAMAFSSCDDNSKSQH-RIATGSFLEDLNNKVDILSFD 317
            NS QE   +SEN  TYDSPYP+YAMAFSS   +S + H RIA GSF+ED +N+VDILS +
Sbjct: 3    NSTQESHLKSENSITYDSPYPLYAMAFSSSPSSSSTHHHRIAVGSFIEDYSNRVDILSLN 62

Query: 318  EETLAFKTHPNLSFDHPYPPTKLMFHPS---KPNSPDLLASSGDFLRLWEIKEGGXXXXX 488
             ETL+FKTHP++SFDHPYPPTKLMFHP+   + +S DLLASSGD+LRLWEI+        
Sbjct: 63   TETLSFKTHPSVSFDHPYPPTKLMFHPASSLRKSSSDLLASSGDYLRLWEIR-------- 114

Query: 489  XXXXXVVQKSLLNNSKTSEFCAPLTSFDWNPVDPRRIGTSSIDTTCTIWDVERGVVETQL 668
                 V   S+LNNSK+SEFCAPLTSFDWN ++P+RIGT SIDTTCTIWD+E+G VETQL
Sbjct: 115  --GDVVEPLSVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGCVETQL 172

Query: 669  IAHDKEVYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPHPDTPLLRLAWNKQD 848
            IAHDKEVYD+AWGEA VFASVSADGSVRIFDLRDKEHSTI+YESP PDTPLLRLAWNKQD
Sbjct: 173  IAHDKEVYDMAWGEARVFASVSADGSVRIFDLRDKEHSTILYESPRPDTPLLRLAWNKQD 232

Query: 849  LRYMATILMDSNKVVILDIRSPTMPVAELDRHRASVNAIAWAPQSPRHICSAGDDAQALI 1028
            LRYMATILMDSNKVVILDIRSPT PVAEL+RHRASVNAIAWAPQS RHICSAGDDAQALI
Sbjct: 233  LRYMATILMDSNKVVILDIRSPTTPVAELERHRASVNAIAWAPQSCRHICSAGDDAQALI 292

Query: 1029 WELPTVAGPNGIDPMLAYSADSEINQLQWSVLQPDWIAIAFASKMQ 1166
            W+LPTVAGPNGIDPM  YSA SEINQLQWS  QPDWIAIAF++KMQ
Sbjct: 293  WDLPTVAGPNGIDPMSMYSASSEINQLQWSAAQPDWIAIAFSNKMQ 338


>emb|CAN67365.1| hypothetical protein VITISV_033304 [Vitis vinifera]
          Length = 336

 Score =  534 bits (1376), Expect = e-149
 Identities = 261/337 (77%), Positives = 290/337 (86%), Gaps = 3/337 (0%)
 Frame = +3

Query: 165  RSENLFTYDSPYPIYAMAFSSCDDNSKSQH---RIATGSFLEDLNNKVDILSFDEETLAF 335
            RSEN  TY+SPYP+Y+MA SS      +QH   RIA GSF+E+  N+VDI+SFDE+ LA 
Sbjct: 11   RSENCVTYESPYPLYSMAISS-----STQHHHPRIAIGSFIEEXXNRVDIVSFDEDALAI 65

Query: 336  KTHPNLSFDHPYPPTKLMFHPSKPNSPDLLASSGDFLRLWEIKEGGXXXXXXXXXXVVQK 515
            +THP LSFDHPYPPTKLMFHP+   SPD LASSG++LRLWE+++            +   
Sbjct: 66   RTHPXLSFDHPYPPTKLMFHPNSRTSPDHLASSGEYLRLWEVRDNS----------IQPL 115

Query: 516  SLLNNSKTSEFCAPLTSFDWNPVDPRRIGTSSIDTTCTIWDVERGVVETQLIAHDKEVYD 695
            S+LNNSKTSEFCAPLTSFDWN V+PRRIGTSSIDTTCTIWDVERGVVETQLIAHDKEVYD
Sbjct: 116  SVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDVERGVVETQLIAHDKEVYD 175

Query: 696  IAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPHPDTPLLRLAWNKQDLRYMATILM 875
            IAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESP PDTPLLRLAWNKQD+RYMATILM
Sbjct: 176  IAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDVRYMATILM 235

Query: 876  DSNKVVILDIRSPTMPVAELDRHRASVNAIAWAPQSPRHICSAGDDAQALIWELPTVAGP 1055
            DSNK+VILDIRSPTMPVAEL+RHRASVNAI+WAPQS RHICS GDD+QALIWELPT+AGP
Sbjct: 236  DSNKIVILDIRSPTMPVAELERHRASVNAISWAPQSSRHICSGGDDSQALIWELPTLAGP 295

Query: 1056 NGIDPMLAYSADSEINQLQWSVLQPDWIAIAFASKMQ 1166
            NGIDPM  Y A SEINQLQWS  QP+WIAIAF++K+Q
Sbjct: 296  NGIDPMSVYLASSEINQLQWSAAQPEWIAIAFSNKLQ 332


>gb|AEI55401.1| TTG1 [Rubus idaeus]
          Length = 344

 Score =  532 bits (1370), Expect = e-148
 Identities = 266/346 (76%), Positives = 290/346 (83%), Gaps = 7/346 (2%)
 Frame = +3

Query: 150  NSGQERS---ENLFTYDSPYPIYAMAFSSCDDNSKSQHRIATGSFLEDLNNKVDILSFDE 320
            NS QE     EN  TY+SPYP+YAMAFSS        HRIA GSF+E+ +N+VDILSFD 
Sbjct: 3    NSTQESHLGPENSVTYESPYPLYAMAFSSPRTRHHHHHRIAVGSFIEEFSNRVDILSFDP 62

Query: 321  ETLAFKTHPNLSFDHPYPPTKLMFHPSKPNS----PDLLASSGDFLRLWEIKEGGXXXXX 488
            +TL  K +P LSFDHPYPPTKLMFHP+ PN+     D+LASSGD+LRLWE+K+       
Sbjct: 63   DTLTLKPNPALSFDHPYPPTKLMFHPN-PNTLHKTNDILASSGDYLRLWEVKDSSVDRLE 121

Query: 489  XXXXXVVQKSLLNNSKTSEFCAPLTSFDWNPVDPRRIGTSSIDTTCTIWDVERGVVETQL 668
                     S+LNNSKTSEFCAPLTSFDWN ++PRRIGTSSIDTTCTIWD+E+GVVETQL
Sbjct: 122  PI-------SVLNNSKTSEFCAPLTSFDWNEIEPRRIGTSSIDTTCTIWDIEKGVVETQL 174

Query: 669  IAHDKEVYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPHPDTPLLRLAWNKQD 848
            IAHDKEVYDIAWGEA VFASVSADGSVRIFDLRDKEHSTIIYESP PDTPLLRLAWNKQD
Sbjct: 175  IAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQD 234

Query: 849  LRYMATILMDSNKVVILDIRSPTMPVAELDRHRASVNAIAWAPQSPRHICSAGDDAQALI 1028
            LRYMATILMDSNKVVILDIRSPTMPVAEL+RH+ SVNAIAWAPQS RHICSAGDD+QALI
Sbjct: 235  LRYMATILMDSNKVVILDIRSPTMPVAELERHKGSVNAIAWAPQSARHICSAGDDSQALI 294

Query: 1029 WELPTVAGPNGIDPMLAYSADSEINQLQWSVLQPDWIAIAFASKMQ 1166
            WELPTVAGPNGIDPM  YSA +EINQLQWS  QPDWIAIAF +KMQ
Sbjct: 295  WELPTVAGPNGIDPMSMYSAGAEINQLQWSAAQPDWIAIAFTNKMQ 340


>gb|AFY23208.1| transparent testa glabra 1 [Rosa rugosa]
          Length = 346

 Score =  531 bits (1367), Expect = e-148
 Identities = 268/348 (77%), Positives = 294/348 (84%), Gaps = 9/348 (2%)
 Frame = +3

Query: 150  NSGQERS---ENLFTYDSPYPIYAMAFS-SCDDNSKSQH-RIATGSFLEDLNNKVDILSF 314
            NS QE     EN  TYDSPYP+YAMAFS +    ++  H RIA GSF+E+ +N+VDILSF
Sbjct: 3    NSTQESHLGPENSVTYDSPYPLYAMAFSPAAPTRTRHNHPRIAVGSFIEEFSNRVDILSF 62

Query: 315  DEETLAFKTHPNLSFDHPYPPTKLMFHPSKPNS----PDLLASSGDFLRLWEIKEGGXXX 482
            D +TL  K +P+LSFDHPYPPTKLMFHP+ PNS     D+LASSGD+LRLWE+K+     
Sbjct: 63   DPDTLTLKPNPSLSFDHPYPPTKLMFHPN-PNSLHKSSDILASSGDYLRLWEVKDSSVDR 121

Query: 483  XXXXXXXVVQKSLLNNSKTSEFCAPLTSFDWNPVDPRRIGTSSIDTTCTIWDVERGVVET 662
                       S+LNNSKTSEFCAPLTSFDWN ++PRRIGTSSIDTTCTIWD+E+GVVET
Sbjct: 122  LEPI-------SVLNNSKTSEFCAPLTSFDWNEIEPRRIGTSSIDTTCTIWDIEKGVVET 174

Query: 663  QLIAHDKEVYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPHPDTPLLRLAWNK 842
            QLIAHDKEVYDIAWGEA VFASVSADGSVRIFDLRDKEHSTIIYESP PDTPLLRLAWNK
Sbjct: 175  QLIAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNK 234

Query: 843  QDLRYMATILMDSNKVVILDIRSPTMPVAELDRHRASVNAIAWAPQSPRHICSAGDDAQA 1022
            QDLRYMATILMDSNKVVILDIRSPTMPVAEL+RHR SVNAIAWAPQS RHICSAGDD+QA
Sbjct: 235  QDLRYMATILMDSNKVVILDIRSPTMPVAELERHRGSVNAIAWAPQSARHICSAGDDSQA 294

Query: 1023 LIWELPTVAGPNGIDPMLAYSADSEINQLQWSVLQPDWIAIAFASKMQ 1166
            LIWELPTVAGPNGIDPM  YSA +EINQLQWS  QPDWIAIAF++KMQ
Sbjct: 295  LIWELPTVAGPNGIDPMSMYSAGAEINQLQWSAAQPDWIAIAFSNKMQ 342