BLASTX nr result
ID: Coptis23_contig00000513
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00000513 (1171 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI27727.3| unnamed protein product [Vitis vinifera] 86 2e-14 ref|XP_002267013.1| PREDICTED: uncharacterized protein LOC100244... 86 2e-14 ref|XP_003580711.1| PREDICTED: UPF0136 membrane protein At2g2624... 80 1e-12 gb|AFK38721.1| unknown [Lotus japonicus] 80 1e-12 ref|XP_002309449.1| predicted protein [Populus trichocarpa] gi|2... 79 3e-12 >emb|CBI27727.3| unnamed protein product [Vitis vinifera] Length = 107 Score = 85.5 bits (210), Expect = 2e-14 Identities = 50/107 (46%), Positives = 52/107 (48%) Frame = +2 Query: 332 MSMSQKLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYVYTQLPIRPXXXXXXX 511 MSMSQKLT YYVYTQLP RP Sbjct: 1 MSMSQKLTLGYAALVGVGGVMGYMKSGSQKSLAAGGLSALLLYYVYTQLPTRPAFASFLG 60 Query: 512 XXXXXXXXXVMGFRFKKSGKIFPAGLVSFFSFVMTGGYLHGILRSLH 652 VMG RFKKSGK+FPAG+VS S VMTGGYLHGILRSLH Sbjct: 61 LGLSAALVGVMGSRFKKSGKLFPAGVVSLVSLVMTGGYLHGILRSLH 107 >ref|XP_002267013.1| PREDICTED: uncharacterized protein LOC100244242 [Vitis vinifera] Length = 246 Score = 85.5 bits (210), Expect = 2e-14 Identities = 50/107 (46%), Positives = 52/107 (48%) Frame = +2 Query: 332 MSMSQKLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYVYTQLPIRPXXXXXXX 511 MSMSQKLT YYVYTQLP RP Sbjct: 140 MSMSQKLTLGYAALVGVGGVMGYMKSGSQKSLAAGGLSALLLYYVYTQLPTRPAFASFLG 199 Query: 512 XXXXXXXXXVMGFRFKKSGKIFPAGLVSFFSFVMTGGYLHGILRSLH 652 VMG RFKKSGK+FPAG+VS S VMTGGYLHGILRSLH Sbjct: 200 LGLSAALVGVMGSRFKKSGKLFPAGVVSLVSLVMTGGYLHGILRSLH 246 >ref|XP_003580711.1| PREDICTED: UPF0136 membrane protein At2g26240-like [Brachypodium distachyon] Length = 209 Score = 80.1 bits (196), Expect = 1e-12 Identities = 39/65 (60%), Positives = 43/65 (66%) Frame = +2 Query: 458 YYVYTQLPIRPXXXXXXXXXXXXXXXXVMGFRFKKSGKIFPAGLVSFFSFVMTGGYLHGI 637 Y+V+TQLP+RP VMG RFKKSGKIFPAG+VS SFVM GGY HGI Sbjct: 144 YFVHTQLPVRPVFASSIGLGISAALLTVMGSRFKKSGKIFPAGVVSLLSFVMVGGYFHGI 203 Query: 638 LRSLH 652 LRS H Sbjct: 204 LRSSH 208 >gb|AFK38721.1| unknown [Lotus japonicus] Length = 226 Score = 79.7 bits (195), Expect = 1e-12 Identities = 37/65 (56%), Positives = 44/65 (67%) Frame = +2 Query: 458 YYVYTQLPIRPXXXXXXXXXXXXXXXXVMGFRFKKSGKIFPAGLVSFFSFVMTGGYLHGI 637 YYV+T+LP+RP VMG RFKKSGK+FPAG+VS S +MTGGYLHGI Sbjct: 162 YYVHTELPLRPVFASSLGLGISAALLAVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGI 221 Query: 638 LRSLH 652 +RS H Sbjct: 222 MRSAH 226 >ref|XP_002309449.1| predicted protein [Populus trichocarpa] gi|222855425|gb|EEE92972.1| predicted protein [Populus trichocarpa] Length = 109 Score = 78.6 bits (192), Expect = 3e-12 Identities = 39/65 (60%), Positives = 42/65 (64%) Frame = +2 Query: 458 YYVYTQLPIRPXXXXXXXXXXXXXXXXVMGFRFKKSGKIFPAGLVSFFSFVMTGGYLHGI 637 YYVYTQLP P VMG RF KS KIFPAG+VS SF+MTGGYLHGI Sbjct: 45 YYVYTQLPANPVYASSIGLGISAALMGVMGSRFLKSRKIFPAGVVSLVSFIMTGGYLHGI 104 Query: 638 LRSLH 652 LRS+H Sbjct: 105 LRSMH 109