BLASTX nr result

ID: Coptis23_contig00000513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000513
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27727.3| unnamed protein product [Vitis vinifera]               86   2e-14
ref|XP_002267013.1| PREDICTED: uncharacterized protein LOC100244...    86   2e-14
ref|XP_003580711.1| PREDICTED: UPF0136 membrane protein At2g2624...    80   1e-12
gb|AFK38721.1| unknown [Lotus japonicus]                               80   1e-12
ref|XP_002309449.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-12

>emb|CBI27727.3| unnamed protein product [Vitis vinifera]
          Length = 107

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 50/107 (46%), Positives = 52/107 (48%)
 Frame = +2

Query: 332 MSMSQKLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYVYTQLPIRPXXXXXXX 511
           MSMSQKLT                                  YYVYTQLP RP       
Sbjct: 1   MSMSQKLTLGYAALVGVGGVMGYMKSGSQKSLAAGGLSALLLYYVYTQLPTRPAFASFLG 60

Query: 512 XXXXXXXXXVMGFRFKKSGKIFPAGLVSFFSFVMTGGYLHGILRSLH 652
                    VMG RFKKSGK+FPAG+VS  S VMTGGYLHGILRSLH
Sbjct: 61  LGLSAALVGVMGSRFKKSGKLFPAGVVSLVSLVMTGGYLHGILRSLH 107


>ref|XP_002267013.1| PREDICTED: uncharacterized protein LOC100244242 [Vitis vinifera]
          Length = 246

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 50/107 (46%), Positives = 52/107 (48%)
 Frame = +2

Query: 332 MSMSQKLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYVYTQLPIRPXXXXXXX 511
           MSMSQKLT                                  YYVYTQLP RP       
Sbjct: 140 MSMSQKLTLGYAALVGVGGVMGYMKSGSQKSLAAGGLSALLLYYVYTQLPTRPAFASFLG 199

Query: 512 XXXXXXXXXVMGFRFKKSGKIFPAGLVSFFSFVMTGGYLHGILRSLH 652
                    VMG RFKKSGK+FPAG+VS  S VMTGGYLHGILRSLH
Sbjct: 200 LGLSAALVGVMGSRFKKSGKLFPAGVVSLVSLVMTGGYLHGILRSLH 246


>ref|XP_003580711.1| PREDICTED: UPF0136 membrane protein At2g26240-like [Brachypodium
           distachyon]
          Length = 209

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 39/65 (60%), Positives = 43/65 (66%)
 Frame = +2

Query: 458 YYVYTQLPIRPXXXXXXXXXXXXXXXXVMGFRFKKSGKIFPAGLVSFFSFVMTGGYLHGI 637
           Y+V+TQLP+RP                VMG RFKKSGKIFPAG+VS  SFVM GGY HGI
Sbjct: 144 YFVHTQLPVRPVFASSIGLGISAALLTVMGSRFKKSGKIFPAGVVSLLSFVMVGGYFHGI 203

Query: 638 LRSLH 652
           LRS H
Sbjct: 204 LRSSH 208


>gb|AFK38721.1| unknown [Lotus japonicus]
          Length = 226

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 37/65 (56%), Positives = 44/65 (67%)
 Frame = +2

Query: 458 YYVYTQLPIRPXXXXXXXXXXXXXXXXVMGFRFKKSGKIFPAGLVSFFSFVMTGGYLHGI 637
           YYV+T+LP+RP                VMG RFKKSGK+FPAG+VS  S +MTGGYLHGI
Sbjct: 162 YYVHTELPLRPVFASSLGLGISAALLAVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGI 221

Query: 638 LRSLH 652
           +RS H
Sbjct: 222 MRSAH 226


>ref|XP_002309449.1| predicted protein [Populus trichocarpa] gi|222855425|gb|EEE92972.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 39/65 (60%), Positives = 42/65 (64%)
 Frame = +2

Query: 458 YYVYTQLPIRPXXXXXXXXXXXXXXXXVMGFRFKKSGKIFPAGLVSFFSFVMTGGYLHGI 637
           YYVYTQLP  P                VMG RF KS KIFPAG+VS  SF+MTGGYLHGI
Sbjct: 45  YYVYTQLPANPVYASSIGLGISAALMGVMGSRFLKSRKIFPAGVVSLVSFIMTGGYLHGI 104

Query: 638 LRSLH 652
           LRS+H
Sbjct: 105 LRSMH 109


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