BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000507
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA40429.1| unknown [Solanum tuberosum]                            204   4e-50
ref|XP_002511394.1| 50S ribosomal protein L7/L12, putative [Rici...   202   9e-50
ref|XP_002282612.1| PREDICTED: 50S ribosomal protein L12, chloro...   199   1e-48
ref|XP_004170687.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...   195   2e-47
ref|XP_004152013.1| PREDICTED: 50S ribosomal protein L12, chloro...   194   3e-47

>gb|ABA40429.1| unknown [Solanum tuberosum]
          Length = 194

 Score =  204 bits (518), Expect = 4e-50
 Identities = 120/194 (61%), Positives = 134/194 (69%), Gaps = 5/194 (2%)
 Frame = +3

Query: 126 MKLLAFLRTVHXXXXXXXXXXXXQCRLFQPDFGPKDPMVKPKRXXXXXXXXXXXXXXXXS 305
           MKL+A LR +             Q R FQPDF P+DP  KP R                S
Sbjct: 1   MKLIARLRPIQTCTALREIIGPLQSRSFQPDFVPRDPNAKPIRYKYPAAYDPYGPRPPPS 60

Query: 306 DKVVQLAERIAALPLEERIQIFPALRHRLLQSEI-QISTEGMDLDSQGGS----AMAEEE 470
           DK+VQLAERIAAL  EER QI P LR  L    + QIS EGMDL + GG+    A AEE+
Sbjct: 61  DKIVQLAERIAALAPEERRQIGPLLREILRHPNLKQISVEGMDLGAIGGAGGGPAKAEEK 120

Query: 471 KPEKTAFDVKLEKYDAASKIKVIKEVRAFTSLGLKEAKDLVEKAPVLLKQGVTKEEANEI 650
           K EKTAFDVKLEK+DAA+KIKVIKEVR+FTSLGLKEAK+LVEKAP +LKQGVTKEEANEI
Sbjct: 121 KVEKTAFDVKLEKFDAAAKIKVIKEVRSFTSLGLKEAKELVEKAPAILKQGVTKEEANEI 180

Query: 651 IEKLKAVGGAAVME 692
           IEK+KAVGG AVME
Sbjct: 181 IEKIKAVGGVAVME 194


>ref|XP_002511394.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223550509|gb|EEF51996.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 193

 Score =  202 bits (515), Expect = 9e-50
 Identities = 114/193 (59%), Positives = 133/193 (68%), Gaps = 4/193 (2%)
 Frame = +3

Query: 126 MKLLAFLRTVHXXXXXXXXXXXXQCRLFQPDFGPKDPMVKPKRXXXXXXXXXXXXXXXXS 305
           MK +  LR+V             Q R FQ DF P+DP + P++                S
Sbjct: 1   MKFVPLLRSVSTRYTLREITGPLQVRFFQHDFVPRDPKINPRKYKYPAFYDPYGPRPPPS 60

Query: 306 DKVVQLAERIAALPLEERIQIFPALRHRLLQSEIQ-ISTEGMDLDSQGGSAMAE---EEK 473
           DK+VQLAERIAALP EER QI P L ++L   ++Q ISTEGMDL +QG  A      EEK
Sbjct: 61  DKIVQLAERIAALPPEERRQIGPTLHYKLNHPKLQTISTEGMDLGAQGSQAAVAAKVEEK 120

Query: 474 PEKTAFDVKLEKYDAASKIKVIKEVRAFTSLGLKEAKDLVEKAPVLLKQGVTKEEANEII 653
            EKTAFDVKLEK+DAA+KIKVIKEVRAFT+LGLKEAKDLVEKAP +LKQGVTKEEAN+II
Sbjct: 121 KEKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKAPAVLKQGVTKEEANDII 180

Query: 654 EKLKAVGGAAVME 692
           EK+KA GG A+ME
Sbjct: 181 EKIKAAGGVAIME 193


>ref|XP_002282612.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Vitis
           vinifera]
          Length = 193

 Score =  199 bits (506), Expect = 1e-48
 Identities = 115/193 (59%), Positives = 133/193 (68%), Gaps = 4/193 (2%)
 Frame = +3

Query: 126 MKLLAFLRTVHXXXXXXXXXXXXQCRLFQPDFGPKDPMVKPKRXXXXXXXXXXXXXXXXS 305
           MK  A ++TV             Q R FQ DF P++P  KPKR                S
Sbjct: 1   MKFTALVKTVRVHPTLPKIIGPLQSRFFQHDFVPREPNAKPKRYKYPPFYDPYGPKPPPS 60

Query: 306 DKVVQLAERIAALPLEERIQIFPALRHRLLQSEIQ-ISTEGMDLDSQGGSAMAE---EEK 473
           +KVV LAERIAAL  EER+QI P L+ RL   + Q ISTEGM+L SQGG+A      EEK
Sbjct: 61  EKVVGLAERIAALAPEERLQIGPMLKDRLSLPKTQVISTEGMELGSQGGAAAGAGKVEEK 120

Query: 474 PEKTAFDVKLEKYDAASKIKVIKEVRAFTSLGLKEAKDLVEKAPVLLKQGVTKEEANEII 653
            EKTAFDVKLEK++AA+KIKVIKEVRAFTSLGLKEAKDLVEK PV++KQG+TKEEAN+II
Sbjct: 121 VEKTAFDVKLEKFEAAAKIKVIKEVRAFTSLGLKEAKDLVEKVPVVIKQGITKEEANDII 180

Query: 654 EKLKAVGGAAVME 692
           EK+KA GG AVME
Sbjct: 181 EKIKAAGGVAVME 193


>ref|XP_004170687.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L12,
           chloroplastic-like [Cucumis sativus]
          Length = 193

 Score =  195 bits (495), Expect = 2e-47
 Identities = 108/193 (55%), Positives = 128/193 (66%), Gaps = 4/193 (2%)
 Frame = +3

Query: 126 MKLLAFLRTVHXXXXXXXXXXXXQCRLFQPDFGPKDPMVKPKRXXXXXXXXXXXXXXXXS 305
           MKL    +++             Q R FQPDF P+DP  KPK+                S
Sbjct: 1   MKLTVVAQSLQVRSTFAKIIGLSQVRFFQPDFTPRDPNAKPKKYKYPAFYDPYGPRPPPS 60

Query: 306 DKVVQLAERIAALPLEERIQIFPALRHRLLQSEIQ-ISTEGMDLDSQGGSAMAE---EEK 473
           DK+++LAERI ALP  ER QI P L  +L   ++Q IS +G+D+  +GG+A      EEK
Sbjct: 61  DKIIELAERIVALPAAERCQIGPTLXRKLRHPKLQEISVDGLDMGPEGGAAAGSSNVEEK 120

Query: 474 PEKTAFDVKLEKYDAASKIKVIKEVRAFTSLGLKEAKDLVEKAPVLLKQGVTKEEANEII 653
            EKTAFDVKLEK+DAASKIKVIKEVRAFT+LGLKEAKDLVEK P +LKQGVTKEEAN II
Sbjct: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180

Query: 654 EKLKAVGGAAVME 692
           EK+KA GG AVME
Sbjct: 181 EKIKAAGGVAVME 193


>ref|XP_004152013.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Cucumis
           sativus]
          Length = 193

 Score =  194 bits (494), Expect = 3e-47
 Identities = 108/193 (55%), Positives = 128/193 (66%), Gaps = 4/193 (2%)
 Frame = +3

Query: 126 MKLLAFLRTVHXXXXXXXXXXXXQCRLFQPDFGPKDPMVKPKRXXXXXXXXXXXXXXXXS 305
           MKL    +++             Q R FQPDF P+DP  KPK+                S
Sbjct: 1   MKLTVVAQSLQVRSTFAKIIGLSQVRFFQPDFTPRDPNAKPKKYKYPAFYDPYGPRPPPS 60

Query: 306 DKVVQLAERIAALPLEERIQIFPALRHRLLQSEIQ-ISTEGMDLDSQGGSAMAE---EEK 473
           DK+++LAERI ALP  ER QI P L  +L   ++Q IS +G+D+  +GG+A      EEK
Sbjct: 61  DKIIELAERIVALPAAERCQIGPTLGEKLRHPKLQEISVDGLDMGPEGGAAAGSSNVEEK 120

Query: 474 PEKTAFDVKLEKYDAASKIKVIKEVRAFTSLGLKEAKDLVEKAPVLLKQGVTKEEANEII 653
            EKTAFDVKLEK+DAASKIKVIKEVRAFT+LGLKEAKDLVEK P +LKQGVTKEEAN II
Sbjct: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180

Query: 654 EKLKAVGGAAVME 692
           EK+KA GG AVME
Sbjct: 181 EKIKAAGGVAVME 193