BLASTX nr result

ID: Coptis23_contig00000504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000504
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_198947.1| P-loop nucleoside triphosphate hydrolases super...    96   1e-17
ref|XP_002868605.1| hypothetical protein ARALYDRAFT_330390 [Arab...    96   1e-17
dbj|BAB11107.1| kinesin-like protein [Arabidopsis thaliana]            96   1e-17
ref|XP_002304498.1| predicted protein [Populus trichocarpa] gi|2...    94   3e-17
ref|XP_002886395.1| hypothetical protein ARALYDRAFT_474991 [Arab...    94   5e-17

>ref|NP_198947.1| P-loop nucleoside triphosphate hydrolases superfamily protein with
           CH (Calponin Homology) domain [Arabidopsis thaliana]
           gi|332007280|gb|AED94663.1| P-loop nucleoside
           triphosphate hydrolases superfamily protein with CH
           (Calponin Homology) domain [Arabidopsis thaliana]
          Length = 961

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 44/52 (84%), Positives = 47/52 (90%)
 Frame = +1

Query: 1   GNIRVYCRIRPFLQGQNKKQTSIEYIGENGEVVVVNPSKQGKEKHRLFKFTK 156
           GNIRVYCRIRPFLQGQNKKQTSIEY GENGE+VV NP KQGK+ +RLFKF K
Sbjct: 421 GNIRVYCRIRPFLQGQNKKQTSIEYTGENGELVVANPLKQGKDTYRLFKFNK 472


>ref|XP_002868605.1| hypothetical protein ARALYDRAFT_330390 [Arabidopsis lyrata subsp.
           lyrata] gi|297314441|gb|EFH44864.1| hypothetical protein
           ARALYDRAFT_330390 [Arabidopsis lyrata subsp. lyrata]
          Length = 993

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 44/52 (84%), Positives = 47/52 (90%)
 Frame = +1

Query: 1   GNIRVYCRIRPFLQGQNKKQTSIEYIGENGEVVVVNPSKQGKEKHRLFKFTK 156
           GNIRVYCRIRPFLQGQNKKQTSIEY GENGE+VV NP KQGK+ +RLFKF K
Sbjct: 427 GNIRVYCRIRPFLQGQNKKQTSIEYTGENGELVVANPLKQGKDTYRLFKFNK 478


>dbj|BAB11107.1| kinesin-like protein [Arabidopsis thaliana]
          Length = 967

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 44/52 (84%), Positives = 47/52 (90%)
 Frame = +1

Query: 1   GNIRVYCRIRPFLQGQNKKQTSIEYIGENGEVVVVNPSKQGKEKHRLFKFTK 156
           GNIRVYCRIRPFLQGQNKKQTSIEY GENGE+VV NP KQGK+ +RLFKF K
Sbjct: 427 GNIRVYCRIRPFLQGQNKKQTSIEYTGENGELVVANPLKQGKDTYRLFKFNK 478


>ref|XP_002304498.1| predicted protein [Populus trichocarpa] gi|222841930|gb|EEE79477.1|
           predicted protein [Populus trichocarpa]
          Length = 1133

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 41/52 (78%), Positives = 48/52 (92%)
 Frame = +1

Query: 1   GNIRVYCRIRPFLQGQNKKQTSIEYIGENGEVVVVNPSKQGKEKHRLFKFTK 156
           GNIRVYCRIRPFL GQ+KK+T++EYIGENGE+V+ NPSKQGK+ HRLFKF K
Sbjct: 505 GNIRVYCRIRPFLPGQSKKRTTVEYIGENGELVISNPSKQGKDSHRLFKFNK 556


>ref|XP_002886395.1| hypothetical protein ARALYDRAFT_474991 [Arabidopsis lyrata subsp.
           lyrata] gi|297332236|gb|EFH62654.1| hypothetical protein
           ARALYDRAFT_474991 [Arabidopsis lyrata subsp. lyrata]
          Length = 1065

 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 43/56 (76%), Positives = 47/56 (83%)
 Frame = +1

Query: 1   GNIRVYCRIRPFLQGQNKKQTSIEYIGENGEVVVVNPSKQGKEKHRLFKFTKFLVQ 168
           GNIRVYCRIRPFL GQN +QT+IEYIGENGE+VV NP KQGK+ HRLFKF K   Q
Sbjct: 470 GNIRVYCRIRPFLPGQNSRQTTIEYIGENGELVVANPFKQGKDTHRLFKFNKVFDQ 525


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