BLASTX nr result

ID: Coptis23_contig00000501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000501
         (1040 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273421.2| PREDICTED: peptidyl-prolyl cis-trans isomera...   333   4e-89
emb|CAN69876.1| hypothetical protein VITISV_015631 [Vitis vinifera]   333   4e-89
ref|XP_002301464.1| predicted protein [Populus trichocarpa] gi|2...   321   2e-85
ref|XP_002515157.1| peptidyl-prolyl cis-trans isomerase, putativ...   312   8e-83
ref|NP_001240987.1| uncharacterized protein LOC100785805 [Glycin...   306   5e-81

>ref|XP_002273421.2| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-3,
           chloroplastic-like isoform 1 [Vitis vinifera]
           gi|297744066|emb|CBI37036.3| unnamed protein product
           [Vitis vinifera]
          Length = 253

 Score =  333 bits (854), Expect = 4e-89
 Identities = 172/259 (66%), Positives = 195/259 (75%), Gaps = 8/259 (3%)
 Frame = +3

Query: 66  MASSFSLGMSSHTLAFQTGFSKDVSNVCKPHMF--------LKCHGRVLSSSSKYAGALL 221
           MAS+FS         FQ  FSKD+ ++ +  +         L CHGR L+S S YA    
Sbjct: 1   MASAFS-----SCSVFQAVFSKDIPSLPRRPVVSCIGKTPTLSCHGRGLASKSHYASCF- 54

Query: 222 NIKQTSSTVPCAGYKRMVCSNSMAQGVELQAKVTTKCFFDVDVGGEPIGRIVIGLYGDDV 401
           +I   S  V  AG++R++C NSMA  VELQAKVTTKCFFDVD+GGEP+GRIVIGL+G+ V
Sbjct: 55  SITPLSK-VNSAGHRRLMCVNSMANEVELQAKVTTKCFFDVDIGGEPVGRIVIGLFGEVV 113

Query: 402 PKTVENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXVSIYGSKFEDENFN 581
           PKT ENFR LCTGEKGYGYKGCSFHRIIKDFMIQ            +SIYGS FEDENF 
Sbjct: 114 PKTAENFRVLCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDENFA 173

Query: 582 LKHVGPGVLSMANAGPDTNGSQFFICTVKTPWLDKRHVVFGHVVEGMDFVRKLESQETSR 761
           L HVGPGVLSMANAGP+TNGSQFFICTVKTPWLD+RHVVFGHV++GMD VRKLESQETSR
Sbjct: 174 LTHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDRRHVVFGHVIDGMDVVRKLESQETSR 233

Query: 762 SDIPQLPCRIINSGELPLD 818
           SD P+L CRIIN GELP+D
Sbjct: 234 SDYPKLTCRIINCGELPMD 252


>emb|CAN69876.1| hypothetical protein VITISV_015631 [Vitis vinifera]
          Length = 253

 Score =  333 bits (854), Expect = 4e-89
 Identities = 171/261 (65%), Positives = 197/261 (75%), Gaps = 10/261 (3%)
 Frame = +3

Query: 66  MASSFSLGMSSHTLAFQTGFSKDVSNVCKPHMF--------LKCHGRVLSSSSKYAG--A 215
           MAS+FS         FQ  FSKD+ ++ +  +         L CHGR L+S S YA   +
Sbjct: 1   MASAFS-----SCSVFQAVFSKDIPSLPRRPVVSCIGKTPTLSCHGRGLASKSHYASCFS 55

Query: 216 LLNIKQTSSTVPCAGYKRMVCSNSMAQGVELQAKVTTKCFFDVDVGGEPIGRIVIGLYGD 395
           +  + + SS    AG++R++C NSMA  VELQAKVTTKCFFDVD+GGEP+GRIVIGL+G+
Sbjct: 56  ITPLSKASS----AGHRRLMCVNSMANEVELQAKVTTKCFFDVDIGGEPVGRIVIGLFGE 111

Query: 396 DVPKTVENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXVSIYGSKFEDEN 575
            VPKT ENFR LCTGEKGYGYKGCSFHRIIKDFMIQ            +SIYGS FEDEN
Sbjct: 112 VVPKTAENFRVLCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDEN 171

Query: 576 FNLKHVGPGVLSMANAGPDTNGSQFFICTVKTPWLDKRHVVFGHVVEGMDFVRKLESQET 755
           F L HVGPGVLSMANAGP+TNGSQFFICTVKTPWLD+RHVVFGHV++GMD VRKLESQET
Sbjct: 172 FALTHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDRRHVVFGHVIDGMDVVRKLESQET 231

Query: 756 SRSDIPQLPCRIINSGELPLD 818
           SRSD P+L CRIIN GELP+D
Sbjct: 232 SRSDYPKLTCRIINCGELPMD 252


>ref|XP_002301464.1| predicted protein [Populus trichocarpa] gi|222843190|gb|EEE80737.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  321 bits (823), Expect = 2e-85
 Identities = 166/267 (62%), Positives = 192/267 (71%), Gaps = 16/267 (5%)
 Frame = +3

Query: 66  MASSFSLGMS-SHTLAFQTGFSKDVSNVCKPHMF---------------LKCHGRVLSSS 197
           MAS+ S+ M+ S  L  Q  + +D  N  +PH                 L C GR L+S 
Sbjct: 1   MASTSSMQMAHSPRLVIQGSYEQDFLNTSRPHKISTIRNARGGYSQTPTLNCLGRALTSR 60

Query: 198 SKYAGALLNIKQTSSTVPCAGYKRMVCSNSMAQGVELQAKVTTKCFFDVDVGGEPIGRIV 377
           S YA     I+   +  P    +RM C+NSMA  V+LQAKVTTKCFFDV+VGGE +GRIV
Sbjct: 61  SHYASKFPIIRLPKA--PYIKNQRMACANSMANDVDLQAKVTTKCFFDVEVGGELVGRIV 118

Query: 378 IGLYGDDVPKTVENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXVSIYGS 557
           +GL+GD VPKT ENFRALCTG+KGYGYKGCSFHRIIKDFMIQ             SIYGS
Sbjct: 119 MGLFGDVVPKTAENFRALCTGDKGYGYKGCSFHRIIKDFMIQGGDFTRGDGTGGKSIYGS 178

Query: 558 KFEDENFNLKHVGPGVLSMANAGPDTNGSQFFICTVKTPWLDKRHVVFGHVVEGMDFVRK 737
            FEDE+F+LKHVGPGVLSMANAGP+TNGSQFFIC+VKTPWLD RHVVFGHV++GMD VRK
Sbjct: 179 SFEDESFSLKHVGPGVLSMANAGPNTNGSQFFICSVKTPWLDNRHVVFGHVIDGMDVVRK 238

Query: 738 LESQETSRSDIPQLPCRIINSGELPLD 818
           LES ETSRSD P+ PCR++NSGELPLD
Sbjct: 239 LESVETSRSDNPRKPCRVVNSGELPLD 265


>ref|XP_002515157.1| peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
           gi|223545637|gb|EEF47141.1| peptidyl-prolyl cis-trans
           isomerase, putative [Ricinus communis]
          Length = 261

 Score =  312 bits (800), Expect = 8e-83
 Identities = 165/264 (62%), Positives = 192/264 (72%), Gaps = 12/264 (4%)
 Frame = +3

Query: 66  MASSFSLG-MSSHTLAFQTGFSKDVSNVCKPHMF----------LKCHGRVLSSSSKYAG 212
           MAS+FSL  + +  L F+    +DV N+ +  M           L   GR L+S S+Y+ 
Sbjct: 1   MASTFSLQTVPAPRLVFKGTDGQDVKNLSRTCMISAMRSSASGTLSFAGRALTSRSRYS- 59

Query: 213 ALLNIKQTS-STVPCAGYKRMVCSNSMAQGVELQAKVTTKCFFDVDVGGEPIGRIVIGLY 389
             L+   T  S  P   ++RM C  +MA  +E+QAKVTTK FFDVD+GGEP GRIV+GL+
Sbjct: 60  --LSFPITQLSKAPSVKHQRMACIKAMANDLEVQAKVTTKVFFDVDIGGEPAGRIVMGLF 117

Query: 390 GDDVPKTVENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXVSIYGSKFED 569
           GD VPKT ENFRALCTG+KGYGYKGCSFHRIIKDFMIQ            VSI+GS FED
Sbjct: 118 GDVVPKTAENFRALCTGDKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGVSIFGSSFED 177

Query: 570 ENFNLKHVGPGVLSMANAGPDTNGSQFFICTVKTPWLDKRHVVFGHVVEGMDFVRKLESQ 749
           E+F+LKHVGPGVLSMANAGP+TNGSQFFICTVKTPWLD RHVVFG V++GMD VRKLES 
Sbjct: 178 ESFDLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGQVIDGMDVVRKLESV 237

Query: 750 ETSRSDIPQLPCRIINSGELPLDG 821
           ETSRSD P+ PCRIIN GELPLDG
Sbjct: 238 ETSRSDYPRKPCRIINCGELPLDG 261


>ref|NP_001240987.1| uncharacterized protein LOC100785805 [Glycine max]
           gi|255645203|gb|ACU23099.1| unknown [Glycine max]
          Length = 260

 Score =  306 bits (784), Expect = 5e-81
 Identities = 153/243 (62%), Positives = 182/243 (74%), Gaps = 7/243 (2%)
 Frame = +3

Query: 114 QTGFSKDVSNVCKPHMF-------LKCHGRVLSSSSKYAGALLNIKQTSSTVPCAGYKRM 272
           Q  FS+DVS V +  +        L  +G+ L+S S  A      +Q+ +     GY+RM
Sbjct: 20  QGNFSQDVSKVQRSRVVCYGTRSPLGYYGKALTSRSHNALRFSVTRQSEAR--SIGYRRM 77

Query: 273 VCSNSMAQGVELQAKVTTKCFFDVDVGGEPIGRIVIGLYGDDVPKTVENFRALCTGEKGY 452
            C N+    VELQAKVTTKCFFDV+VGGEP+GRIV+GL+G+ VPKTVENFRALCTGEKGY
Sbjct: 78  TCVNAADNVVELQAKVTTKCFFDVEVGGEPVGRIVLGLFGEVVPKTVENFRALCTGEKGY 137

Query: 453 GYKGCSFHRIIKDFMIQXXXXXXXXXXXXVSIYGSKFEDENFNLKHVGPGVLSMANAGPD 632
           GYKG SFHRIIKDFMIQ            +SIYG  F+DE+F LKHVGPGVLSMANAGP+
Sbjct: 138 GYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGPSFKDESFALKHVGPGVLSMANAGPN 197

Query: 633 TNGSQFFICTVKTPWLDKRHVVFGHVVEGMDFVRKLESQETSRSDIPQLPCRIINSGELP 812
           TNGSQFFICTVKTPWLD RHVVFGH+++GMD V+ LESQETSR D+P+ PCRI+N GELP
Sbjct: 198 TNGSQFFICTVKTPWLDNRHVVFGHIIDGMDVVKTLESQETSRLDVPRKPCRIVNCGELP 257

Query: 813 LDG 821
           ++G
Sbjct: 258 IEG 260


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