BLASTX nr result

ID: Coptis23_contig00000413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000413
         (1318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEQ28765.1| expansin 3 [Prunus salicina]                           402   e-110
gb|AAL40354.1|AF448467_1 alpha-expansin [Prunus cerasus]              400   e-109
ref|XP_002522457.1| Alpha-expansin 1 precursor, putative [Ricinu...   400   e-109
dbj|BAC66786.1| expansin [Prunus persica]                             399   e-109
gb|AAG13983.1|AF297522_1 expansin 2 [Prunus avium]                    397   e-108

>gb|AEQ28765.1| expansin 3 [Prunus salicina]
          Length = 252

 Score =  402 bits (1034), Expect = e-110
 Identities = 190/237 (80%), Positives = 199/237 (83%)
 Frame = -1

Query: 1189 SMVSLVNGYGGGGWVNAHATFYXXXXXXXXXXXXXGYGNLYSQGYGTNTAALSTALFNNG 1010
            +MVS  + YGGGGWVNA ATFY             GYGNLYSQGYGTNTAALSTALFNNG
Sbjct: 16   AMVSCAHAYGGGGWVNARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNG 75

Query: 1009 MACGSCYEIRCVNDGRWCLPGSIVVTATXXXXXXXXXXXXNGGWCNPPQHHFDLSQPVFQ 830
            + CGSCYEIRCVND +WCLPG+IVVTAT             GGWCNPPQHHFDLSQPVFQ
Sbjct: 76   LGCGSCYEIRCVNDPKWCLPGAIVVTATNFCPPNNALPNNAGGWCNPPQHHFDLSQPVFQ 135

Query: 829  HIAQYRAGIVPVAYRRVHCNKRGGIRFTINGHSYFNLVLITNVGGAGDVHAVFVKGSRTG 650
            HIAQYRAG+VPVAYRRV C +RGGIRFTINGHSYFNLVLITNVGGAGDVH+V VKGSRTG
Sbjct: 136  HIAQYRAGVVPVAYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSVSVKGSRTG 195

Query: 649  WQAMSRNWGQNWQSNSYLNGQNLSFKVVTSDGRFVVSYNVAPAGWSFGQTYSGAQFR 479
            WQAMSRNWGQNWQSNSYLNGQ+LSFKV TSDGR VVSYN APAGWSFGQTYSGAQFR
Sbjct: 196  WQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVVSYNAAPAGWSFGQTYSGAQFR 252


>gb|AAL40354.1|AF448467_1 alpha-expansin [Prunus cerasus]
          Length = 252

 Score =  400 bits (1028), Expect = e-109
 Identities = 188/237 (79%), Positives = 199/237 (83%)
 Frame = -1

Query: 1189 SMVSLVNGYGGGGWVNAHATFYXXXXXXXXXXXXXGYGNLYSQGYGTNTAALSTALFNNG 1010
            +MVS  + YGGGGWVNA ATFY             GYGNLYSQGYGTNTAALSTALFNNG
Sbjct: 16   AMVSCAHAYGGGGWVNARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNG 75

Query: 1009 MACGSCYEIRCVNDGRWCLPGSIVVTATXXXXXXXXXXXXNGGWCNPPQHHFDLSQPVFQ 830
            + CGSCYEIRCVND +WCLPG+IVVTAT             GGWCNPPQHHFDLSQPVFQ
Sbjct: 76   LGCGSCYEIRCVNDPKWCLPGAIVVTATNFCPPNNALPNNAGGWCNPPQHHFDLSQPVFQ 135

Query: 829  HIAQYRAGIVPVAYRRVHCNKRGGIRFTINGHSYFNLVLITNVGGAGDVHAVFVKGSRTG 650
            HIAQY+AG+VPVAYRRV C +RGGIRFTINGHSYFNLVLITNVGGAGDVH+V VKGSRTG
Sbjct: 136  HIAQYKAGVVPVAYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSVSVKGSRTG 195

Query: 649  WQAMSRNWGQNWQSNSYLNGQNLSFKVVTSDGRFVVSYNVAPAGWSFGQTYSGAQFR 479
            WQAMSRNWGQNWQSNSYLNGQ+LSFKV TSDGR VV+YN APAGWSFGQTYSGAQFR
Sbjct: 196  WQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVVAYNAAPAGWSFGQTYSGAQFR 252


>ref|XP_002522457.1| Alpha-expansin 1 precursor, putative [Ricinus communis]
            gi|223538342|gb|EEF39949.1| Alpha-expansin 1 precursor,
            putative [Ricinus communis]
          Length = 249

 Score =  400 bits (1027), Expect = e-109
 Identities = 189/237 (79%), Positives = 200/237 (84%)
 Frame = -1

Query: 1189 SMVSLVNGYGGGGWVNAHATFYXXXXXXXXXXXXXGYGNLYSQGYGTNTAALSTALFNNG 1010
            +MVS VN YGGGGW+NAHATFY             GYGNLYSQGYGTNTAALSTALFN+G
Sbjct: 13   AMVSSVNCYGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNSG 72

Query: 1009 MACGSCYEIRCVNDGRWCLPGSIVVTATXXXXXXXXXXXXNGGWCNPPQHHFDLSQPVFQ 830
            ++CGSCYEIRCVND +WCLPGSIVVTAT             GGWCNPPQ HFDLSQPVFQ
Sbjct: 73   LSCGSCYEIRCVNDPKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQ 132

Query: 829  HIAQYRAGIVPVAYRRVHCNKRGGIRFTINGHSYFNLVLITNVGGAGDVHAVFVKGSRTG 650
            HIAQYRAGIVPVAYRRV C +RGGIRFTINGHSYFNLVLITNVGGAGDVHAV +KGSRTG
Sbjct: 133  HIAQYRAGIVPVAYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVAIKGSRTG 192

Query: 649  WQAMSRNWGQNWQSNSYLNGQNLSFKVVTSDGRFVVSYNVAPAGWSFGQTYSGAQFR 479
            WQAMSRNWGQNWQSN+YLNGQ+LSFKV TSDGR VVSYNVAP  WSFGQT+SGAQFR
Sbjct: 193  WQAMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRSVVSYNVAPVSWSFGQTFSGAQFR 249


>dbj|BAC66786.1| expansin [Prunus persica]
          Length = 252

 Score =  399 bits (1026), Expect = e-109
 Identities = 188/237 (79%), Positives = 199/237 (83%)
 Frame = -1

Query: 1189 SMVSLVNGYGGGGWVNAHATFYXXXXXXXXXXXXXGYGNLYSQGYGTNTAALSTALFNNG 1010
            +MVS  + YGGGGWVNA ATFY             GYGNLYSQGYGTNTAALSTALFNNG
Sbjct: 16   AMVSCAHAYGGGGWVNARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNG 75

Query: 1009 MACGSCYEIRCVNDGRWCLPGSIVVTATXXXXXXXXXXXXNGGWCNPPQHHFDLSQPVFQ 830
            + CGSCYEIRCV+D +WCLPG+IVVTAT             GGWCNPPQHHFDLSQPVFQ
Sbjct: 76   LGCGSCYEIRCVSDPKWCLPGAIVVTATNFCPPNNALPNNAGGWCNPPQHHFDLSQPVFQ 135

Query: 829  HIAQYRAGIVPVAYRRVHCNKRGGIRFTINGHSYFNLVLITNVGGAGDVHAVFVKGSRTG 650
            HIAQY+AG+VPVAYRRV C +RGGIRFTINGHSYFNLVLITNVGGAGDVH+V VKGSRTG
Sbjct: 136  HIAQYKAGVVPVAYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSVSVKGSRTG 195

Query: 649  WQAMSRNWGQNWQSNSYLNGQNLSFKVVTSDGRFVVSYNVAPAGWSFGQTYSGAQFR 479
            WQAMSRNWGQNWQSNSYLNGQ+LSFKV TSDGR VVSYN APAGWSFGQTYSGAQFR
Sbjct: 196  WQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVVSYNAAPAGWSFGQTYSGAQFR 252


>gb|AAG13983.1|AF297522_1 expansin 2 [Prunus avium]
          Length = 252

 Score =  397 bits (1020), Expect = e-108
 Identities = 187/237 (78%), Positives = 198/237 (83%)
 Frame = -1

Query: 1189 SMVSLVNGYGGGGWVNAHATFYXXXXXXXXXXXXXGYGNLYSQGYGTNTAALSTALFNNG 1010
            +MVS  + YGGGGWV+A ATFY             GYGNLYSQGYGTNTAALSTALFNNG
Sbjct: 16   AMVSCAHAYGGGGWVDARATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNG 75

Query: 1009 MACGSCYEIRCVNDGRWCLPGSIVVTATXXXXXXXXXXXXNGGWCNPPQHHFDLSQPVFQ 830
            + CGSCYEIRCVND +WCLPG+IVVTAT             GGWCNPPQHHFDLSQPVFQ
Sbjct: 76   LGCGSCYEIRCVNDPKWCLPGAIVVTATNFCPPNNALPNNAGGWCNPPQHHFDLSQPVFQ 135

Query: 829  HIAQYRAGIVPVAYRRVHCNKRGGIRFTINGHSYFNLVLITNVGGAGDVHAVFVKGSRTG 650
            HIAQY+AG+VPVAYRRV C +RGGIRFTINGHSYFNLVLITNVGGAGDVH+V VKGSRTG
Sbjct: 136  HIAQYKAGVVPVAYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSVSVKGSRTG 195

Query: 649  WQAMSRNWGQNWQSNSYLNGQNLSFKVVTSDGRFVVSYNVAPAGWSFGQTYSGAQFR 479
            WQAMSRNWGQNWQSNSYLNGQ+LSFKV TSDGR VVSYN APAGWSFGQTYSGAQ R
Sbjct: 196  WQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVVSYNAAPAGWSFGQTYSGAQLR 252


Top