BLASTX nr result

ID: Coptis23_contig00000365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000365
         (1287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275133.2| PREDICTED: altered inheritance rate of mitoc...   382   e-103
gb|AFK40357.1| unknown [Lotus japonicus]                              380   e-103
ref|XP_002520006.1| conserved hypothetical protein [Ricinus comm...   378   e-102
ref|XP_004146884.1| PREDICTED: altered inheritance rate of mitoc...   377   e-102
ref|XP_003540197.1| PREDICTED: altered inheritance rate of mitoc...   375   e-101

>ref|XP_002275133.2| PREDICTED: altered inheritance rate of mitochondria protein 25-like
           [Vitis vinifera] gi|297737362|emb|CBI26563.3| unnamed
           protein product [Vitis vinifera]
          Length = 412

 Score =  382 bits (981), Expect = e-103
 Identities = 182/247 (73%), Positives = 209/247 (84%)
 Frame = -3

Query: 940 LSQSATGLLKPTSPEEFKVAPLLARANLIVTRNIEWANLMVGFEQENRYAVVDAYYPQAP 761
           LSQS TG L+P SPEE +VAPLLAR+NL++TR+IEWANL++GFEQENRYA+VD  YPQ+P
Sbjct: 166 LSQSVTGFLEPASPEEARVAPLLARSNLLITRDIEWANLVLGFEQENRYAMVDVCYPQSP 225

Query: 760 VGFISEQSSMIARQILRTRRPFIAYITDSMGNELFRVRRPFWWVTSTIFVEIDGKEIGXX 581
           VGFI EQS++I RQ+LR RRPF+AYI D+MGNELFRVRRPFWW+TS+I+ E++GKE+G  
Sbjct: 226 VGFIREQSNVIMRQLLRLRRPFVAYIVDAMGNELFRVRRPFWWITSSIYAEVNGKEVGVV 285

Query: 580 XXXXXXXXXVYDLYLGNKQFAVVENPGFWNWTFILKDIDGNVLAEIDRDFRGFGLELLTD 401
                    VYDLYLGNKQFA VENPGFWNWTF LKDIDG VLAEIDRD+RGFG E+ TD
Sbjct: 286 HRRWHLWRRVYDLYLGNKQFAAVENPGFWNWTFTLKDIDGKVLAEIDRDWRGFGFEIFTD 345

Query: 400 AGQYVIRFGDVDHKSKTGPATKIQDLEVGRPLILSERAVALALAVSLDNDYFSRHGGWGL 221
           AGQYVIRFG  D  SK+GPA  IQ+LEV RPL LSERAVA+ALAVSLDNDYFSRHGGWG+
Sbjct: 346 AGQYVIRFGSSDPNSKSGPAKAIQELEVVRPLTLSERAVAVALAVSLDNDYFSRHGGWGI 405

Query: 220 PFFLVTE 200
           PF  V E
Sbjct: 406 PFVAVDE 412


>gb|AFK40357.1| unknown [Lotus japonicus]
          Length = 280

 Score =  380 bits (975), Expect = e-103
 Identities = 181/247 (73%), Positives = 209/247 (84%)
 Frame = -3

Query: 940 LSQSATGLLKPTSPEEFKVAPLLARANLIVTRNIEWANLMVGFEQENRYAVVDAYYPQAP 761
           +SQS TG L+P SP+E  VAPLLAR+NL++TR+IEWANL++GFEQENRYA+VDA YPQ+P
Sbjct: 34  VSQSVTGFLEPHSPQEAMVAPLLARSNLLITRDIEWANLVLGFEQENRYAIVDACYPQSP 93

Query: 760 VGFISEQSSMIARQILRTRRPFIAYITDSMGNELFRVRRPFWWVTSTIFVEIDGKEIGXX 581
           VGF+ EQS++I RQ+LR RRPF+AYITD+MGNELFRVRRPFWW+TS+I+ EIDGKEIG  
Sbjct: 94  VGFMREQSNVITRQLLRLRRPFVAYITDAMGNELFRVRRPFWWITSSIYAEIDGKEIGVV 153

Query: 580 XXXXXXXXXVYDLYLGNKQFAVVENPGFWNWTFILKDIDGNVLAEIDRDFRGFGLELLTD 401
                    +YDLYLGNKQFAVVENPG WNWTF LKDI+G VL +IDRD+RGFG E+LTD
Sbjct: 154 HRRWHLWRRIYDLYLGNKQFAVVENPGLWNWTFTLKDINGEVLGQIDRDWRGFGFEILTD 213

Query: 400 AGQYVIRFGDVDHKSKTGPATKIQDLEVGRPLILSERAVALALAVSLDNDYFSRHGGWGL 221
           AGQYVIRFG  D  SK G A  IQDLEV RPL L+ERAVA+ALA+SLDNDYFSRHGGWGL
Sbjct: 214 AGQYVIRFGSSDPSSKIGLAFAIQDLEVSRPLTLAERAVAVALAISLDNDYFSRHGGWGL 273

Query: 220 PFFLVTE 200
           PF  VTE
Sbjct: 274 PFMAVTE 280


>ref|XP_002520006.1| conserved hypothetical protein [Ricinus communis]
           gi|223540770|gb|EEF42330.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 400

 Score =  378 bits (970), Expect = e-102
 Identities = 179/246 (72%), Positives = 207/246 (84%)
 Frame = -3

Query: 937 SQSATGLLKPTSPEEFKVAPLLARANLIVTRNIEWANLMVGFEQENRYAVVDAYYPQAPV 758
           SQS +  LKP SPEE K+APLLAR+NL++TR+IEWANL++GFEQENRYA+VD  YPQ+PV
Sbjct: 155 SQSVSAFLKPNSPEEAKIAPLLARSNLLITRDIEWANLVLGFEQENRYAMVDVCYPQSPV 214

Query: 757 GFISEQSSMIARQILRTRRPFIAYITDSMGNELFRVRRPFWWVTSTIFVEIDGKEIGXXX 578
           GFI EQS+++ARQ+LR RRPF+AYI D+MGNELFRVRRPFWWVTS+I+ EIDGKE+G   
Sbjct: 215 GFIREQSNVLARQLLRLRRPFVAYIMDAMGNELFRVRRPFWWVTSSIYAEIDGKEVGVVH 274

Query: 577 XXXXXXXXVYDLYLGNKQFAVVENPGFWNWTFILKDIDGNVLAEIDRDFRGFGLELLTDA 398
                   +YDLYLGN+QFAVVENPG WNWTF LKDI+G VLA+IDRD+RGFG E+ TDA
Sbjct: 275 RRWHLWRRIYDLYLGNQQFAVVENPGLWNWTFTLKDINGEVLAQIDRDWRGFGFEIFTDA 334

Query: 397 GQYVIRFGDVDHKSKTGPATKIQDLEVGRPLILSERAVALALAVSLDNDYFSRHGGWGLP 218
           GQYVIRFG  D  SKTGPA  IQ+LEV RPL LSERAVA+ALA+SLDNDYFSRH GWGLP
Sbjct: 335 GQYVIRFGSSDPSSKTGPAAAIQELEVARPLTLSERAVAVALAISLDNDYFSRHSGWGLP 394

Query: 217 FFLVTE 200
           F  V E
Sbjct: 395 FVAVGE 400


>ref|XP_004146884.1| PREDICTED: altered inheritance rate of mitochondria protein 25-like
           [Cucumis sativus] gi|449518823|ref|XP_004166435.1|
           PREDICTED: altered inheritance rate of mitochondria
           protein 25-like [Cucumis sativus]
          Length = 366

 Score =  377 bits (967), Expect = e-102
 Identities = 180/246 (73%), Positives = 208/246 (84%)
 Frame = -3

Query: 937 SQSATGLLKPTSPEEFKVAPLLARANLIVTRNIEWANLMVGFEQENRYAVVDAYYPQAPV 758
           SQS +G L+P SPEE +VAPLLAR+NL++TR+IEWANL+ GFEQENRYA+VD  YPQ+PV
Sbjct: 121 SQSVSGFLEPHSPEEVRVAPLLARSNLLITRDIEWANLVFGFEQENRYAIVDVCYPQSPV 180

Query: 757 GFISEQSSMIARQILRTRRPFIAYITDSMGNELFRVRRPFWWVTSTIFVEIDGKEIGXXX 578
           G I EQSS+IARQ+LR RRPF+AYITD+MGNELFRVRRPFWW+TS+I+ E+DGKEIG   
Sbjct: 181 GLIREQSSIIARQLLRLRRPFVAYITDAMGNELFRVRRPFWWITSSIYAEVDGKEIGVVH 240

Query: 577 XXXXXXXXVYDLYLGNKQFAVVENPGFWNWTFILKDIDGNVLAEIDRDFRGFGLELLTDA 398
                   VYDLYLGNKQFAVVENPGFW+WTF LKDIDG VLAE+DRD+RGFG E+ TDA
Sbjct: 241 RRWHLWRRVYDLYLGNKQFAVVENPGFWSWTFTLKDIDGKVLAEVDRDWRGFGFEIFTDA 300

Query: 397 GQYVIRFGDVDHKSKTGPATKIQDLEVGRPLILSERAVALALAVSLDNDYFSRHGGWGLP 218
           GQYVIRFG  D  S+TG A ++Q+LEV R L LSERAVA+ALA+SLDNDYFSRHGGWGLP
Sbjct: 301 GQYVIRFGASDPVSRTGAAREVQELEVARHLTLSERAVAVALAISLDNDYFSRHGGWGLP 360

Query: 217 FFLVTE 200
           F  V E
Sbjct: 361 FVAVGE 366


>ref|XP_003540197.1| PREDICTED: altered inheritance rate of mitochondria protein 25-like
           [Glycine max]
          Length = 349

 Score =  375 bits (962), Expect = e-101
 Identities = 177/247 (71%), Positives = 208/247 (84%)
 Frame = -3

Query: 940 LSQSATGLLKPTSPEEFKVAPLLARANLIVTRNIEWANLMVGFEQENRYAVVDAYYPQAP 761
           +SQS +    P SPEE KVAPLLAR+NL++TR+IEWANL++GFEQENRYA+VDA YPQ+P
Sbjct: 103 ISQSVSDFFDPQSPEEAKVAPLLARSNLLITRDIEWANLVLGFEQENRYAIVDACYPQSP 162

Query: 760 VGFISEQSSMIARQILRTRRPFIAYITDSMGNELFRVRRPFWWVTSTIFVEIDGKEIGXX 581
           VGFI EQS++IARQ+LR RRPF+AYITD++GNELFRVRRPFWW+TS+I+ EIDGKE+G  
Sbjct: 163 VGFIREQSNIIARQLLRLRRPFVAYITDALGNELFRVRRPFWWITSSIYAEIDGKEVGVV 222

Query: 580 XXXXXXXXXVYDLYLGNKQFAVVENPGFWNWTFILKDIDGNVLAEIDRDFRGFGLELLTD 401
                    +YDLYLGNKQFAVVENPG WNWTF LKDI+G VLA+IDRD+RGFG E+LTD
Sbjct: 223 HRRWHLWRRIYDLYLGNKQFAVVENPGLWNWTFTLKDINGEVLAQIDRDWRGFGFEILTD 282

Query: 400 AGQYVIRFGDVDHKSKTGPATKIQDLEVGRPLILSERAVALALAVSLDNDYFSRHGGWGL 221
           AGQYVIRFG  D  SK G A+ I+DLEV R L L+ERAV +ALA+SLDNDYFSRHGGWGL
Sbjct: 283 AGQYVIRFGSSDPSSKIGLASAIEDLEVSRKLTLAERAVTVALAISLDNDYFSRHGGWGL 342

Query: 220 PFFLVTE 200
           PFF+  E
Sbjct: 343 PFFVAEE 349


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